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EBI DbfetchID AK056167; SV 1; linear; mRNA; STD; HUM; 2469 BP. XX AC AK056167; XX DT 31-OCT-2001 (Rel. 69, Created) DT 04-JUL-2008 (Rel. 96, Last updated, Version 8) XX DE Homo sapiens cDNA FLJ31605 fis, clone NT2RI2002729, highly similar to DE Alpha-1,6-mannosyl-glycoprotein2-beta-N- acetylglucosaminyltransferase (EC DE 2.4.1.143). XX KW fis (full insert sequence); FLI_CDNA; oligo capping. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2469 RA Isogai T., Otsuki T., Sugiyama T.; RT ; RL Submitted (24-OCT-2001) to the EMBL/GenBank/DDBJ databases. RL Contact:Takao Isogai Helix Research Institute, Genomics Laboratory; 1532-3 RL Yana, Kisarazu, Chiba 292-0812, Japan E-mail :flj-cdna@nifty.com XX RN [2] RX DOI; 10.1038/ng1285 RX PUBMED; 14702039. RA Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., RA Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., RA Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S., RA Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., RA Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., RA Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., RA Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., RA Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., RA Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., RA Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., RA Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., RA Tanase T., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., RA Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., RA Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., RA Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., RA Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., RA Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., RA Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., RA Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., RA Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., RA Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., RA Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., RA Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., RA Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., RA Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., RA Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., RA Sugano S.; RT "Complete sequencing and characterization of 21,243 full-length human RT cDNAs"; RL Nat. Genet. 36(1):40-45(2004). XX RN [3] RA Ninomiya K., Wagatsuma M., Kanda K., Kondo H., Yokoi T., Kodaira H., RA Furuya T., Takahashi M., Kikkawa E., Omura Y., Abe K., Kamihara K., RA Katsuta N., Sato K., Tanikawa M., Yamazaki M., Sugiyama T., Irie R., RA Otsuki T., Sato H., Wakamatsu A., Ishii S., Yamamoto J., Isono Y., RA Kawai-Hio Y., Saito K., Nishikawa T., Kimura K., Yamashita H., Matsuo K., RA Nakamura Y., Sekine M., Kikuchi H., Murakawa K., Kanehori K., RA Takahashi-Fujii A., Oshima A., Sugiyama A., Kawakami B., Suzuki Y., RA Sugano S., Nagahari K., Masuho Y., Nagai K., Isogai T.; RT "NEDO human cDNA sequencing project"; RL Unpublished. XX DR H-InvDB; HIT000012781. XX CC NEDO human cDNA sequencing project supported by Ministry of CC Economy, Trade and Industry of Japan; cDNA full insert sequencing: CC Research Association for Biotechnology (RAB); cDNA library CC construction: Helix Research Institute (HRI) (supported by Japan CC Key Technology Center etc.); 5'- & 3'-end one pass sequencing: CC RAB, HRI, and Biotechnology Center, National Institute of CC Technology and Evaluation; clone selection for full insert CC sequencing: RAB and HRI. XX FH Key Location/Qualifiers FH FT source 1..2469 FT /organism="Homo sapiens" FT /mol_type="mRNA" FT /clone_lib="NT2RI2" FT /clone="NT2RI2002729" FT /cell_line="NT2" FT /cell_type="teratocarcinoma" FT /note="cloning vector: pME18SFL3" FT /note="mRNA from NT2 neuronal precursor cells treated FT 2-weeks mitotic inhibitor after 5-weeks retinoic acid (RA) FT induction." FT /note="majorly NT2 neuron" FT /db_xref="taxon:9606" FT CDS 258..1601 FT /codon_start=1 FT /note="highly similar to FT Alpha-1,6-mannosyl-glycoprotein2-beta-N- FT acetylglucosaminyltransferase (EC 2.4.1.143)" FT /db_xref="GOA:B3KPC5" FT /db_xref="HGNC:7045" FT /db_xref="InterPro:IPR007754" FT /db_xref="UniProtKB/TrEMBL:B3KPC5" FT /protein_id="BAG51637.1" FT /translation="MRFRIYKRKVLILTLVVAACGFVLWSSNGRQRKNEALAPPLLDAE FT PARGAGGRGGDHPSVAVGIRRVSNVSAASLVPAVPQPEADNLTLRYRSLVYQLNFDQTL FT RNVDKAGTWAPRELVLVVQVHNRPEYLRLLLDSLRKAQGIDNVLVIFSHDFWSTEINQL FT IAGVNFCPVLQVFFPFSIQLYPNEFPGSDPRDCPRDLPKNAALKLGCINAEYPDSFGHY FT REAKFSQTKHHWWWKLHFVWERVKILRDYAGLILFLEEDHYLAPDFYHVFKKMWKLKQQ FT ECPECDVLSLGTYSASRSFYGMADKVDVKTWKSTEHNMGLALTRNAYQKLIECTDTFCT FT YDDYNWDWTLQYLTVSCLPKFWKVLVPQIPRIFHAGDCGMHHKKTCRPSTQSAQIESLL FT NNNKQYMFPETLTISEKFTVVAISPPRKNGGWGDIRDHELCKSYRRLQ" XX SQ Sequence 2469 BP; 657 A; 532 C; 585 G; 695 T; 0 other; ataacggtcc ccgctggagt gaggcgaggc cgcgtcgctc agttctggcc gtctagggcc 60 cctgtaagga tgagagcgca gaggacgcag ggccgctgga ggcgcaggta acgaagctag 120 ggtgcggttg ggaccgcggc tgagcttttt ccgggacccg tggtgctgaa tggagaggac 180 ggagacgaag ccgagccgcg gctcctagcg gcggcgccga tgctcgagct gtagctgcgc 240 tcccggccct ggagaccatg aggttccgca tctacaaacg gaaggtgcta atcctgacgc 300 tcgtggtggc cgcctgcggc ttcgtcctct ggagcagcaa tgggcgacaa aggaagaacg 360 aggccctcgc cccaccgttg ctggacgccg aacccgcgcg gggtgccggc ggccgcggtg 420 gggaccaccc ctctgtggct gtgggcatcc gcagggtctc caacgtgtcg gcggcttccc 480 tggtcccggc ggtcccccag cccgaggcgg acaacctgac gctgcggtac cggtccctgg 540 tgtaccagct gaactttgat cagaccctga ggaatgtaga taaggctggc acctgggccc 600 cccgggagct ggtgctggtg gtccaggtgc ataaccggcc cgaatacctc agactgctgc 660 tggactcact tcgaaaagcc cagggaattg acaacgtcct cgtcatcttt agccatgact 720 tctggtcgac cgagatcaat cagctgatcg ccggggtgaa tttctgtccg gttctgcagg 780 tgttctttcc tttcagcatt cagttgtacc ctaacgagtt tccaggtagt gaccctagag 840 attgtcccag agacctgccg aagaatgccg ctttgaaatt ggggtgcatc aatgctgagt 900 atcccgactc cttcggccat tatagagagg ccaaattctc ccagaccaaa catcactggt 960 ggtggaagct gcattttgtg tgggaaagag tgaaaattct tcgagattat gctggcctta 1020 tacttttcct agaagaggat cactacttag ccccagactt ttaccatgtc ttcaaaaaga 1080 tgtggaaact gaagcagcaa gagtgccctg aatgtgatgt tctctccctg gggacctata 1140 gtgccagtcg cagtttctat ggcatggctg acaaggtaga tgtgaaaact tggaaatcca 1200 cagagcacaa tatgggtcta gccttgaccc ggaatgccta tcagaagctg atcgagtgca 1260 cagacacttt ctgtacttat gatgattata actgggactg gactcttcaa tacttgactg 1320 tatcttgtct tccaaaattc tggaaagtgc tggttcctca aattcctagg atctttcatg 1380 ctggagactg tggtatgcat cacaagaaaa cctgtagacc atccactcag agtgcccaaa 1440 ttgagtcact cttaaataat aacaaacaat acatgtttcc agaaactcta actatcagtg 1500 aaaagtttac tgtggtagcc atttccccac ctagaaaaaa tggagggtgg ggagatatta 1560 gggaccatga actctgtaaa agttatagaa gactgcagtg aaaatcacag ttacaaaagc 1620 gacagtcttc tatttttgat atttgtccaa acaggacata caattgaata aaagagttta 1680 ggaactggtt tctgctttaa tacaaaaaca aaatcttgta aaaggtgtcc aaatacatag 1740 taatcttttc cagttatgtc tgattaagat ttaaaactga aggtttcatt ttgggagtag 1800 ggttttaaag ctcaatctgt tatctgctaa aattgattat tgttgatatg agagaagagg 1860 ggaaatttta tttaaattgc atttattaat ctttttatct gaaactttgt acacttttcc 1920 actttcaaaa cctattttaa gtacagcaaa atttatttaa aactgtcata gcagtaaaaa 1980 gtattacgat gaaattgtta gggtattaat ggaacaaacc cagtttcact ctcttgacac 2040 acttattagg aagggattgc ttcactggtt taataattta aaagttatgt ttgttaaaca 2100 ccctgtcaga acagtcattt tcagtattag attcctgtac tattgtgttt tgagtgtgtt 2160 ttggaacctt catagaacac actttctttt ggaatgtatt tgattgataa gaaagtttaa 2220 acattgtttt cacctcaatg tagaaataca gtggttttgt tttttttttt cttttagtgc 2280 tgacaaaata aaatactcat ttttgcataa aaaggttcct aatccttttg cagaataagt 2340 tttgtttact ctttatacca aaattcagtg aaggcattct acaagttttg agttagcatt 2400 acattttaat atttactatt gctacattgt ataattgagt ttgaaataaa acccagctta 2460 tgacaatgc 2469 // |
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