 |
|
EBI DbfetchID AK023137; SV 1; linear; mRNA; STD; HUM; 2891 BP. XX AC AK023137; XX DT 29-SEP-2000 (Rel. 65, Created) DT 04-JUL-2008 (Rel. 96, Last updated, Version 8) XX DE Homo sapiens cDNA FLJ13075 fis, clone NT2RP3001898, highly similar to Homo DE sapiens mannosyl (alpha-1,3-)-glycoprotein DE beta-1,4-N-acetylglucosaminyltransferase, isoenzyme B (MGAT4B), transcript DE variant 2, mRNA. XX KW fis (full insert sequence); FLI_CDNA; oligo capping. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2891 RA Isogai T., Otsuki T.; RT ; RL Submitted (23-AUG-2000) to the EMBL/GenBank/DDBJ databases. RL Contact:Takao Isogai Helix Research Institute, Genomics Laboratory; 1532-3 RL Yana, Kisarazu, Chiba 292-0812, Japan E-mail :flj-cdna@nifty.com XX RN [2] RX DOI; 10.1038/ng1285 RX PUBMED; 14702039. RA Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., RA Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., RA Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S., RA Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., RA Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., RA Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., RA Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., RA Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., RA Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., RA Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., RA Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., RA Tanase T., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., RA Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., RA Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., RA Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., RA Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., RA Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., RA Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., RA Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., RA Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., RA Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., RA Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., RA Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., RA Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., RA Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., RA Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., RA Sugano S.; RT "Complete sequencing and characterization of 21,243 full-length human RT cDNAs"; RL Nat. Genet. 36(1):40-45(2004). XX RN [3] RA Isogai T., Ota T., Hayashi K., Sugiyama T., Otsuki T., Suzuki Y., RA Nishikawa T., Nagai K., Sugano S., Ishibashi T., Fujimori K., Tanai H., RA Kimata M., Watanabe M., Hiraoka S., Ishii S., Kawai Y., Saito K., RA Yamamoto J., Wakamatsu A., Nakamura Y., Nagahari K., Masuho Y., RA Kanehori K.; RT "NEDO human cDNA sequencing project"; RL Unpublished. XX DR ASTD; TRAN00000074725. DR Ensembl-Gn; ENSG00000161013; Homo_sapiens. DR Ensembl-Tr; ENST00000292591; Homo_sapiens. DR Ensembl-Tr; ENST00000337755; Homo_sapiens. DR Ensembl-Tr; ENST00000429098; Homo_sapiens. DR H-InvDB; HIT000006411. XX CC NEDO human cDNA sequencing project supported by Ministry of CC International Trade and Industry of Japan; cDNA full insert CC sequencing: Research Association for Biotechnology; cDNA library CC construction, 5'- & 3'-end one pass sequencing and clone CC selection: Helix Research Institute (supported by Japan Key CC Technology Center etc.) and Department of Virology, Institute of CC Medical Science, University of Tokyo. XX FH Key Location/Qualifiers FH FT source 1..2891 FT /organism="Homo sapiens" FT /mol_type="mRNA" FT /clone_lib="NT2RP3" FT /clone="NT2RP3001898" FT /cell_line="NT2" FT /cell_type="teratocarcinoma" FT /note="cloning vector: pME18SFL3" FT /note="mRNA from NT2 neuronal precursor cells after 2-weeks FT retinoic acid (RA) induction." FT /db_xref="taxon:9606" FT CDS 765..2456 FT /codon_start=1 FT /note="highly similar to Homo sapiens mannosyl FT (alpha-1,3-)-glycoprotein FT beta-1,4-N-acetylglucosaminyltransferase, isoenzyme B FT (MGAT4B), transcript variant 2, mRNA" FT /db_xref="GOA:A8MPR0" FT /db_xref="HGNC:7048" FT /db_xref="InterPro:IPR006759" FT /db_xref="UniProtKB/TrEMBL:A8MPR0" FT /protein_id="BAG51162.1" FT /translation="MSRVAGTRTDVNELLQRWTPRCVRWHTGGARRVALDRPLVTACLP FT PAGDVVDVYQREFLALRDRLHAAEQESLKRSKELNLVLDEIKRAVSERQALRDGDGNRT FT WGRLTEDPRLKPWNGSHRHVLHLPTVFHHLPHLLAKESSLQPAVRVGQGRTGVSVVMGI FT PSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKALFPTEI FT HSGLLEVISPSPHFYPDFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYYVQL FT EDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILMFYRD FT KPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKD FT KDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAYLREDFFWAFTPAAGDFIRFRFFQP FT LRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYPRSPDGYLQ FT IGSFYKGVAEGEVDPAFGPLEALRLSIQTDSPVWVILSEIFLKKAD" XX SQ Sequence 2891 BP; 584 A; 881 C; 855 G; 571 T; 0 other; ttttcagaga ctcgcctggc agaggcctgg agcgtcctgc tgcgtggact gtgggcaccg 60 agccaccagg aggttgttga tctcattctt gctcactggt ccctgccaga ctggtggtgc 120 ctctctactg tcgggcagcc ccacctctgt gctgccccat ccacctacag ccctcatgcc 180 tgggcccagc tggaggttct gacaggggcc ccctggggtg gcatgcggac ccttcagggt 240 gccccaggcg cagcacaggt ctccagagac acaggcacca gggcgttcag agctagtccc 300 ctcgctgctg ttgactgtcc ttgagcagcc ccagggccgg tttctcaacc tcatttgctc 360 acctgagcaa tgaagtgagg tgggctcctg gaactgcagc agccaccccc cggggccatc 420 gtgaggctaa gaatccagtg cagggtgagc aaccagcgac cgctacaagg acagtgaaga 480 gctagcacca ggaccttggg tagcccaccc gctggaggga gcgtgtgctg caaaaagcaa 540 gagtgggctt tggaggccaa cggatggagc ggattcagtc tgaggctgtt ccagcccttg 600 cttaggatcc acctacctag gtctggaaat cgtatttcca cttcagatgc cttctcagag 660 gataaaataa cccccggtgg gggagagtac tggaagaggg ctaattcccc tggttttctc 720 cccatgagca ttagtgtcag tgtaatttta gagtgacccc agctatgtca cgtgtggcag 780 gcacaagaac agatgtcaat gagctattgc agaggtggac acccagatgt gtgcgctggc 840 acactggagg ggcccgtagg gtggctctag accgccccct cgtgacggct tgcctaccac 900 ctgcaggcga cgttgtggac gtttaccagc gggagttcct ggcgctgcgc gatcggttgc 960 acgcagctga gcaggagagc ctcaagcgct ccaaggagct caacctggtg ctggacgaga 1020 tcaagagggc cgtgtcagaa aggcaggcgc tgcgagacgg agacggcaat cgcacctggg 1080 gccgcctaac agaggacccc cgattgaagc cgtggaacgg ctcacaccgg cacgtgctgc 1140 acctgcccac cgtcttccat cacctgccac acctgctggc caaggagagc agtctgcagc 1200 ccgcggtgcg cgtgggccag ggccgcaccg gagtgtcggt ggtgatgggc atcccgagcg 1260 tgcggcgcga ggtgcactcg tacctgactg acactctgca ctcgctcatc tccgagctga 1320 gcccgcagga gaaggaggac tcggtcatcg tggtgctgat cgccgagact gactcacagt 1380 acacttcggc agtgacagag aacatcaagg ccttgttccc cacggagatc cattctgggc 1440 tcctggaggt catctcaccc tccccccact tctaccctga cttctcccgc ctccgagagt 1500 cctttgggga ccccaaggag agagtcaggt ggaggaccaa acagaacctc gattactgct 1560 tcctcatgat gtacgcgcag tccaaaggca tctactacgt gcagctggag gatgacatcg 1620 tggccaagcc caactacctg agcaccatga agaactttgc actgcagcag ccttcagagg 1680 actggatgat cctggagttc tcccagctgg gcttcattgg taagatgttc aagtcgctgg 1740 acctgagcct gattgtagag ttcattctca tgttctaccg ggacaagccc atcgactggc 1800 tcctggacca tattctgtgg gtgaaagtct gcaaccccga gaaggatgcg aagcactgtg 1860 accggcagaa agccaacctg cggatccgct tcaaaccgtc cctcttccag cacgtgggca 1920 ctcactcctc gctggctggc aagatccaga aactgaagga caaagacttt ggaaagcagg 1980 cgctgcggaa ggagcatgtg aacccgccag cagaggtgag cacgagcctg aagacatacc 2040 agcacttcac cctggagaaa gcctacctgc gcgaggactt cttctgggcc ttcacccctg 2100 ccgcggggga cttcatccgc ttccgcttct tccaacctct aagactggag cggttcttct 2160 tccgcagtgg gaacatcgag cacccggagg acaagctctt caacacgtct gtggaggtgc 2220 tgcccttcga caaccctcag tcagacaagg aggccctgca ggagggccgc accgccaccc 2280 tccggtaccc tcggagcccc gacggctacc tccagatcgg ctccttctac aagggagtgg 2340 cagagggaga ggtggaccca gccttcggcc ctctggaagc actgcgcctc tcgatccaga 2400 cggactcccc tgtgtgggtg attctgagcg agatcttcct gaaaaaggcc gactaagctg 2460 cgggcttctg agggtaccct gtggccagcc ctgaagccca catttctggg ggtgtcgtca 2520 ctgccgtccc cggagggcca gatacggccc cgcccaaagg gttctgcctg gcgtcgggct 2580 tgggccggcc tggggtccgc cgctggcccg gaggccctag gagctggtgc tgcccccgcc 2640 cgccgggccg cggaggaggc aggcggcccc cacactgtgc ctgaggcccg gaaccgttcg 2700 cacccggcct gccccagtca ggccgtttta gaagagcttt tacttgggcg cccgccgtct 2760 ctggcgcgaa cactggaatg catatactac tttatgtgct gtgtttttta ttcttggata 2820 catttgattt tttcacgtaa gtccacatat acttctataa gagcgtgact tgtaataaag 2880 ggttaatgaa g 2891 // |
|