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EBI Dbfetch

ID   AK022700; SV 1; linear; mRNA; STD; HUM; 1945 BP.
XX
AC   AK022700;
XX
DT   29-SEP-2000 (Rel. 65, Created)
DT   07-OCT-2008 (Rel. 97, Last updated, Version 9)
XX
DE   Homo sapiens cDNA FLJ12638 fis, clone NT2RM4001930, highly similar to
DE   Dolichyl pyrophosphate Man9GlcNAc2alpha-1,3-glucosyltransferase (EC
DE   2.4.1.-).
XX
KW   fis (full insert sequence); FLI_CDNA; oligo capping.
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1945
RA   Isogai T., Otsuki T.;
RT   ;
RL   Submitted (23-AUG-2000) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Takao Isogai Helix Research Institute, Genomics Laboratory; 1532-3
RL   Yana, Kisarazu, Chiba 292-0812, Japan E-mail :flj-cdna@nifty.com
XX
RN   [2]
RX   DOI; 10.1038/ng1285
RX   PUBMED; 14702039.
RA   Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
RA   Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
RA   Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
RA   Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
RA   Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H.,
RA   Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M.,
RA   Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K.,
RA   Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T.,
RA   Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M.,
RA   Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S.,
RA   Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H.,
RA   Tanase T., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M.,
RA   Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S.,
RA   Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S.,
RA   Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S.,
RA   Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H.,
RA   Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M.,
RA   Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M.,
RA   Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y.,
RA   Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N.,
RA   Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S.,
RA   Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T.,
RA   Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M.,
RA   Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y.,
RA   Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y.,
RA   Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T.,
RA   Sugano S.;
RT   "Complete sequencing and characterization of 21,243 full-length human
RT   cDNAs";
RL   Nat. Genet. 36(1):40-45(2004).
XX
RN   [3]
RA   Isogai T., Ota T., Hayashi K., Sugiyama T., Otsuki T., Suzuki Y.,
RA   Nishikawa T., Nagai K., Sugano S., Ishibashi T., Fujimori K., Tanai H.,
RA   Kimata M., Watanabe M., Hiraoka S., Ishii S., Kawai Y., Saito K.,
RA   Yamamoto J., Wakamatsu A., Nakamura Y., Nagahari K., Masuho Y.,
RA   Kanehori K.;
RT   "NEDO human cDNA sequencing project";
RL   Unpublished.
XX
DR   ASTD; TRAN00000051664.
DR   Ensembl-Gn; ENSG00000088035; Homo_sapiens.
DR   Ensembl-Tr; ENST00000263440; Homo_sapiens.
DR   Ensembl-Tr; ENST00000371108; Homo_sapiens.
DR   Ensembl-Tr; ENST00000405765; Homo_sapiens.
DR   Ensembl-Tr; ENST00000423077; Homo_sapiens.
DR   Ensembl-Tr; ENST00000431147; Homo_sapiens.
DR   H-InvDB; HIT000005974.
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CC   NEDO human cDNA sequencing project supported by Ministry of
CC   International Trade and Industry of Japan; cDNA full insert
CC   sequencing: Research Association for Biotechnology; cDNA library
CC   construction, 5'- & 3'-end one pass sequencing and clone
CC   selection: Helix Research Institute (supported by Japan Key
CC   Technology Center etc.) and Department of Virology, Institute of
CC   Medical Science, University of Tokyo.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1945
FT                   /organism="Homo sapiens"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NT2RM4"
FT                   /clone="NT2RM4001930"
FT                   /cell_line="NT2"
FT                   /cell_type="teratocarcinoma"
FT                   /note="cloning vector: pME18SFL3"
FT                   /note="mRNA from uninduced NT2 neuronal precursor cells."
FT                   /db_xref="taxon:9606"
FT   CDS             244..1767
FT                   /codon_start=1
FT                   /note="highly similar to Dolichyl pyrophosphate
FT                   Man9GlcNAc2alpha-1,3-glucosyltransferase (EC 2.4.1.-)"
FT                   /db_xref="GOA:B3KMU2"
FT                   /db_xref="HGNC:23157"
FT                   /db_xref="InterPro:IPR004856"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9Y672"
FT                   /protein_id="BAG51104.1"
FT                   /translation="MEKWYLMTVVVLIGLTVRWTVSLNSYSGAGKPPMFGDYEAQRHWQ
FT                   EITFNLPVKQWYFNSSDNNLQYWGLDYPPLTAYHSLLCAYVAKFINPDWIALHTSRGYE
FT                   SQAHKLFMRTTVLIADLLIYIPAVVLYCCCLKEISTKKKIANALCILLYPGLILIDYGH
FT                   FQYNSVSLGFALWGVLGISCDCDLLGSLAFCLAINYKQMELYHALPFFCFLLGKCFKKG
FT                   LKGKGFVLLVKLACIVVASFVLCWLPFFTEREQTLQVLRRLFPVDRGLFEDKVANIWCS
FT                   FNVFLKIKDILPRHIQLIMSFCFTFLSLLPACIKLILQPSSKGFKFTLVSCALSFFLFS
FT                   FQVHEKSILLVSLPVCLVLSEIPFMSTWFLLVSTFSMLPLLLKDELLMPSVVTTMAFFI
FT                   ACVTSFSIFEKTSEEELQLKSFSISVRKYLPCFTFLSRIIQYLFLISVITMVLLTLMTV
FT                   TLDPPQKLPDLFSVLVCFVSCLNFLFFLVYFNIIIMWDSKSGRNQKKIS"
XX
SQ   Sequence 1945 BP; 540 A; 357 C; 373 G; 675 T; 0 other;
     gtcaggcgcg aatcccagcg gccggcgggc ggcggggata cttctacata gacataatca        60
     agttttgact atttggaaac caagcatcat taaaattctc tcaaactcct aattgcgaag       120
     aatcgataac atttcaagaa gtgataacat ttctctgaac aagaaaagaa gtgattgacc       180
     acgttttaaa agtactctgg cactggtgct gtgttttctt cccctcccta aatttgaaga       240
     actatggaga aatggtactt gatgacagta gtggttttaa taggactaac agtacgatgg       300
     acagtgtctc ttaattctta ttcaggtgct ggtaaaccgc ctatgtttgg tgattatgaa       360
     gctcagagac actggcaaga aataactttt aatttaccgg tcaaacaatg gtattttaac       420
     agcagtgata acaatttaca gtattgggga ttggattacc cacctcttac agcttatcat       480
     agtctcctat gtgcatatgt ggcaaagttt ataaatccag actggattgc tctccataca       540
     tcacgtggat atgagagtca ggcacataag ctcttcatgc gtacaacagt tttaattgct       600
     gatctgctga tttacatacc tgcagtggtt ttgtactgtt gttgcttaaa agaaatctca       660
     actaagaaaa agattgctaa tgcattatgc atcttgctgt atccaggcct tattcttata       720
     gactatggac attttcaata taattctgtg agtcttggct ttgctttgtg gggtgttctt       780
     ggaatatctt gtgactgcga cctcctaggg tcactggcat tttgcttagc tataaattat       840
     aaacagatgg aactttacca cgccttgcca tttttttgct ttttacttgg caagtgtttt       900
     aaaaaaggcc tcaaaggaaa ggggtttgtg ttgctagtta agctagcttg tattgttgtg       960
     gcttccttcg ttctctgctg gctgccattc tttacagaaa gggaacaaac cctgcaggtt      1020
     ctaagaagac tcttcccggt tgatcgtgga ttatttgagg ataaagtagc caatatttgg      1080
     tgcagcttca atgtctttct gaagattaag gatattttgc cacgtcacat ccaattaata      1140
     atgagctttt gttttacgtt tttgagcctg cttcctgcat gcataaaatt aatacttcag      1200
     ccctcttcca aaggattcaa atttacactg gttagctgtg cgctatcatt ctttttattt      1260
     tctttccaag tacatgaaaa atccattctc ttggtgtcac taccagtctg cttagtttta      1320
     agtgaaattc cttttatgtc tacttggttt ttacttgtgt caacatttag tatgctacct      1380
     cttctattga aggatgaact cctaatgccc tctgttgtga caacaatggc attttttata      1440
     gcttgtgtaa cttccttttc aatatttgaa aagacttctg aagaagaact gcagttgaaa      1500
     tccttttcca tttctgtgag gaaatatctt ccatgtttta catttctttc cagaattata      1560
     caatatttgt ttcttatctc agtcatcact atggtgcttc tgacgttgat gactgtcaca      1620
     ctggatcctc ctcagaaact accggacttg ttttctgtat tggtgtgttt tgtatcttgc      1680
     ttgaacttcc tgttcttctt ggtatacttt aacattatta ttatgtggga ttccaaaagt      1740
     ggaagaaatc agaagaaaat cagctagctg tattcctaaa caaattgttt cctaaacaaa      1800
     tgtgaaaatg tgaacagtgc tgaaaggttt tgtgaacttt ttgctatgta taaatgaaat      1860
     taccattttg agaaccatgg aaccacagga aaggaaatgg tgaaaagtca ttgttgtcta      1920
     cacaaaataa atgtatatgg agacc                                            1945
//


  
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