 |
|
EBI DbfetchID AK018832; SV 1; linear; mRNA; HTC; MUS; 461 BP. XX AC AK018832; XX DT 09-FEB-2001 (Rel. 66, Created) DT 23-SEP-2008 (Rel. 97, Last updated, Version 20) XX DE Mus musculus adult male testis cDNA, RIKEN full-length enriched library, DE clone:1700008E22 product:18 DAYS EMBRYO WHOLE BODY CDNA, RIKEN FULL-LENGTH DE ENRICHED LIBRARY, CLONE:1110039O14:ACYLPHOSPHATASE, ORGAN-COMMON TYPE DE ISOZYME (EC 3.6.1.7) (ACYLPHOSPHATE PHOSPHOHYDROLASE), FULL INSERT SEQUENCE DE homolog [Mus musculus], full insert sequence. XX KW CAP trapper; HTC; HTC_FLI. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Mus. XX RN [1] RP 1-461 RA Adachi J., Aizawa K., Akahira S., Akimura T., Arai A., Aono H., Arakawa T., RA Bono H., Carninci P., Fukuda S., Fukunishi Y., Furuno M., Hanagaki T., RA Hara A., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Imotani K., RA Ishii Y., Itoh M., Izawa M., Kasukawa T., Kato H., Kawai J., Kojima Y., RA Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A., RA Nishi K., Nomura K., Numazaki R., Ohno M., Okazaki Y., Okido T., Owa C., RA Saito H., Saito R., Sakai C., Sakai K., Sano H., Sasaki D., Shibata K., RA Shibata Y., Shinagawa A., Shiraki T., Sogabe Y., Suzuki H., Tagami M., RA Tagawa A., Takahashi F., Tanaka T., Tejima Y., Toya T., Yamamura T., RA Yasunishi A., Yoshida K., Yoshino M., Muramatsu M., Hayashizaki Y.; RT ; RL Submitted (18-AUG-2000) to the EMBL/GenBank/DDBJ databases. RL Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical RL Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 RL Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL RL :http://www.osc.riken.jp/ XX RN [2] RX DOI; 10.1126/science.1112014 RX PUBMED; 16141072. RG The FANTOM Consortium, Riken Genome Exploration Research Group and Genome RG Science Group (Genome Network Project Core Group) RA ; RT "The transcriptional landscape of the mammalian genome."; RL Science 309(5740):1559-1563(2005). XX RN [3] RG RIKEN Genome Exploration Research Group and Genome Science Group (Genome RG Network Project Core Group) and the FANTOM Consortium RA ; RT "Antisense Transcription in the Mammalian Transcriptome"; RL Science 309:1564-1566(2005). XX RN [4] RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase RG I and II Team RA ; RT "Analysis of the mouse transcriptome based on functional annotation of RT 60,770 full-length cDNAs"; RL Nature 420:563-573(2002). XX RN [5] RX DOI; 10.1038/35055500 RX PUBMED; 11217851. RA RIKEN FANTOM Consortium; RT "Functional annotation of a full-length mouse cDNA collection"; RL Nature 409(6821):685-690(2001). XX RN [6] RX DOI; 10.1016/S0076-6879(99)03004-9 RX PUBMED; 10349636. RA Carninci P., Hayashizaki Y.; RT "High-efficiency full-length cDNA cloning"; RL Meth. Enzymol. 303:19-44(1999). XX RN [7] RX DOI; 10.1101/gr.145100 RX PUBMED; 11042159. RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.; RT "Normalization and subtraction of cap-trapper-selected cDNAs to prepare RT full-length cDNA libraries for rapid discovery of new genes"; RL Genome Res. 10(10):1617-1630(2000). XX RN [8] RX DOI; 10.1101/gr.152600 RX PUBMED; 11076861. RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., RA Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R., RA Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., RA Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., RA Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., RA Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.; RT "RIKEN integrated sequence analysis (RISA) system--384-format sequencing RT pipeline with 384 multicapillary sequencer"; RL Genome Res. 10(11):1757-1771(2000). XX DR ASTD; TRAN00000133723. DR Ensembl-Gn; ENSMUSG00000008822; Mus_musculus. DR Ensembl-Tr; ENSMUST00000065913; Mus_musculus. XX CC cDNA library was prepared and sequenced in Mouse Genome CC Encyclopedia Project of Genome Exploration Research Group in Riken CC Genomic Sciences Center and Genome Science Laboratory in RIKEN. CC Division of Experimental Animal Research in Riken contributed to CC prepare mouse tissues. CC Please visit our web site for further details. CC URL:http://www.osc.riken.jp/ CC URL:http://fantom.gsc.riken.jp/ XX FH Key Location/Qualifiers FH FT source 1..461 FT /organism="Mus musculus" FT /strain="C57BL/6J" FT /mol_type="mRNA" FT /sex="male" FT /dev_stage="adult" FT /clone_lib="RIKEN full-length enriched mouse cDNA library" FT /clone="1700008E22" FT /tissue_type="testis" FT /db_xref="taxon:10090" FT CDS 85..384 FT /codon_start=1 FT /transl_table=1 FT /note="18 DAYS EMBRYO WHOLE BODY CDNA, RIKEN FULL-LENGTH FT ENRICHED LIBRARY, CLONE:1110039O14:ACYLPHOSPHATASE, FT ORGAN-COMMON TYPE ISOZYME (EC 3.6.1.7) (ACYLPHOSPHATE FT PHOSPHOHYDROLASE), FULL INSERT SEQUENCE homolog [Mus FT musculus] (SPTR|BAB23208, evidence: FASTY, 100%ID, FT 100%length, match=297)" FT /note="putative" FT /db_xref="GOA:P56376" FT /db_xref="HSSP:2ACY" FT /db_xref="InterPro:IPR017968" FT /db_xref="MGI:1913454" FT /db_xref="UniProtKB/Swiss-Prot:P56376" FT /protein_id="BAB31454.1" FT /translation="MAEGDTLVSVDYEIFGKVQGVFFRKYTQAEGKKLGLVGWVQNTDR FT GTVQGQLQGPVSKVRFMQQWLETRGSPKSHIDRANFNNEKVIANLDYSDFQIVK" FT polyA_signal 442..447 FT /note="putative" FT polyA_site 461 FT /note="putative" XX SQ Sequence 461 BP; 133 A; 101 C; 118 G; 109 T; 0 other; gaggtcttcg gggctgttca gcggctcctg gggaagcccc agaaactcga gcttccgccg 60 ctcggatcat ccaagtgttt gagcatggca gaaggggaca ccttggtctc agtggattac 120 gaaatttttg gaaaggttca aggggtgttt ttccgcaagt acactcaggc tgagggtaaa 180 aagctaggtt tggtgggctg ggttcagaac accgaccggg gcaccgtgca agggcaactg 240 cagggccccg tctccaaggt gcgcttcatg cagcagtggc tggagaccag aggaagtccc 300 aagtcgcaca ttgacagagc aaacttcaac aatgagaaag tcatcgcaaa cttggattat 360 tcagacttcc aaattgtaaa ataatgaaac gaatcttaat attttttcaa aataatctca 420 ctcctttttt taaatcgcta gattaaaaaa aaaatagaac c 461 // |
|