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EBI DbfetchID AK014790; SV 1; linear; mRNA; HTC; MUS; 1576 BP. XX AC AK014790; XX DT 08-FEB-2001 (Rel. 66, Created) DT 23-SEP-2008 (Rel. 97, Last updated, Version 19) XX DE Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, DE clone:4833435D08 product:hypothetical UDP-Glycosyltransferase/glycogen DE phosphorylase structure containing protein, full insert sequence. XX KW CAP trapper; HTC; HTC_FLI. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Mus. XX RN [1] RP 1-1576 RA Adachi J., Aizawa K., Akahira S., Akimura T., Arai A., Aono H., Arakawa T., RA Bono H., Carninci P., Fukuda S., Fukunishi Y., Furuno M., Hanagaki T., RA Hara A., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Imotani K., RA Ishii Y., Itoh M., Izawa M., Kasukawa T., Kato H., Kawai J., Kojima Y., RA Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A., RA Nishi K., Nomura K., Numazaki R., Ohno M., Okazaki Y., Okido T., Owa C., RA Saito H., Saito R., Sakai C., Sakai K., Sano H., Sasaki D., Shibata K., RA Shibata Y., Shinagawa A., Shiraki T., Sogabe Y., Suzuki H., Tagami M., RA Tagawa A., Takahashi F., Tanaka T., Tejima Y., Toya T., Yamamura T., RA Yasunishi A., Yoshida K., Yoshino M., Muramatsu M., Hayashizaki Y.; RT ; RL Submitted (10-JUL-2000) to the EMBL/GenBank/DDBJ databases. RL Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical RL Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 RL Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL RL :http://www.osc.riken.jp/ XX RN [2] RX DOI; 10.1126/science.1112014 RX PUBMED; 16141072. RG The FANTOM Consortium, Riken Genome Exploration Research Group and Genome RG Science Group (Genome Network Project Core Group) RA ; RT "The transcriptional landscape of the mammalian genome."; RL Science 309(5740):1559-1563(2005). XX RN [3] RG RIKEN Genome Exploration Research Group and Genome Science Group (Genome RG Network Project Core Group) and the FANTOM Consortium RA ; RT "Antisense Transcription in the Mammalian Transcriptome"; RL Science 309:1564-1566(2005). XX RN [4] RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase RG I and II Team RA ; RT "Analysis of the mouse transcriptome based on functional annotation of RT 60,770 full-length cDNAs"; RL Nature 420:563-573(2002). XX RN [5] RX DOI; 10.1038/35055500 RX PUBMED; 11217851. RA RIKEN FANTOM Consortium; RT "Functional annotation of a full-length mouse cDNA collection"; RL Nature 409(6821):685-690(2001). XX RN [6] RX DOI; 10.1016/S0076-6879(99)03004-9 RX PUBMED; 10349636. RA Carninci P., Hayashizaki Y.; RT "High-efficiency full-length cDNA cloning"; RL Meth. Enzymol. 303:19-44(1999). XX RN [7] RX DOI; 10.1101/gr.145100 RX PUBMED; 11042159. RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.; RT "Normalization and subtraction of cap-trapper-selected cDNAs to prepare RT full-length cDNA libraries for rapid discovery of new genes"; RL Genome Res. 10(10):1617-1630(2000). XX RN [8] RX DOI; 10.1101/gr.152600 RX PUBMED; 11076861. RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., RA Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R., RA Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., RA Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., RA Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., RA Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.; RT "RIKEN integrated sequence analysis (RISA) system--384-format sequencing RT pipeline with 384 multicapillary sequencer"; RL Genome Res. 10(11):1757-1771(2000). XX DR ASTD; TRAN00000142516. DR Ensembl-Gn; ENSMUSG00000079411; Mus_musculus. DR Ensembl-Tr; ENSMUST00000070801; Mus_musculus. XX CC cDNA library was prepared and sequenced in Mouse Genome CC Encyclopedia Project of Genome Exploration Research Group in Riken CC Genomic Sciences Center and Genome Science Laboratory in RIKEN. CC Division of Experimental Animal Research in Riken contributed to CC prepare mouse tissues. CC Please visit our web site for further details. CC URL:http://www.osc.riken.jp/ CC URL:http://fantom.gsc.riken.jp/ XX FH Key Location/Qualifiers FH FT source 1..1576 FT /organism="Mus musculus" FT /strain="C57BL/6J" FT /mol_type="mRNA" FT /dev_stage="0 day neonate" FT /clone_lib="RIKEN full-length enriched mouse cDNA library" FT /clone="4833435D08" FT /tissue_type="head" FT /db_xref="taxon:10090" FT CDS 21..518 FT /codon_start=1 FT /transl_table=1 FT /note="hypothetical UDP-Glycosyltransferase/glycogen FT phosphorylase structure containing protein (SCOP|53756, FT evidence: SCOP)" FT /note="putative" FT /db_xref="GOA:Q9D8C3" FT /db_xref="InterPro:IPR007235" FT /db_xref="MGI:1914824" FT /db_xref="UniProtKB/Swiss-Prot:Q9D8C3" FT /protein_id="BAB29554.1" FT /translation="MKRAFVTVGTTSFDELVARVVANDCVQILESLGYNHLVLQVGRGT FT VVPKPFRTESFTLDVYRYKDSLKEDLQQADLVISHAGAGSCLESLEKGKPLVVVVNEKL FT MNNHQFELAKQLHKEGHLFYCTCSTLPGLLQSMDLSTLKCYPPGHPEKFSAFLDKVVGL FT QK" FT polyA_signal 1562..1567 FT /note="putative" FT polyA_site 1576 FT /note="putative" XX SQ Sequence 1576 BP; 522 A; 267 C; 320 G; 467 T; 0 other; cggaatctgg aacccgcgcg atgaagagag cgtttgtgac tgtcgggacc accagtttcg 60 acgagctcgt cgcacgggtg gtcgctaacg actgcgttca gatcctcgag agtctgggtt 120 acaaccatct tgtcctccaa gttggtagag gcactgtggt gcccaaacca ttccgtactg 180 agtcattcac tctggatgtt tacaggtata aggattcttt gaaagaagac cttcagcaag 240 ctgatcttgt cattagccac gcaggtgcag gaagctgttt ggagagtctg gagaaaggca 300 aaccacttgt ggtagttgta aatgaaaagt taatgaacaa tcatcaattt gaattggcaa 360 agcagttgca caaagaaggc catctctttt attgtacctg cagcacgctt cctgggctgt 420 tacagtcaat ggatttatca acactgaaat gttatcctcc tggccatcca gaaaaatttt 480 ctgcattttt ggataaagtt gttggattac aaaaataaac tctcaacact ttaaaatacc 540 cctaagtcca gttcatggga tatgataaaa tcaaaataaa ttcatgacat gtttttgtag 600 aacagtataa acccatatat ttaaacaata ttataaggat tttgtggcat aaacattaca 660 gttgtgtcta gatcctaatt ttagtaaatg tttgaggttt ccctaacttt gaatatgtag 720 tgagccctaa ctttgaaaac tatagccttc acagttttgt actaaaattt caaaaaagca 780 aaaactgggc agtggtggtg aatgccttta attctaacct ttgggagcca gaagcaggtg 840 tatcttgagt tcagggccat ccttttctac ccagagaaac tctgtcttta aaatccaaaa 900 caaaactcca aaacaagaaa ttgtaaaaaa atgttaagac tcaagtatta gatgtttttg 960 aataataaat gctaacaatg taacattttg gtgagaaaaa tcagcatttt taggatcata 1020 atctcaagag acagcatttt tgtattaagc agaaaaaaat gggtttactt tgtagaagct 1080 aatttgaaaa agatcaaagt aattgataga gtaaccatgc ttatcctgaa gaataaaata 1140 gatatgttca tcttttgaac ttgtgatcct tcaagtcctg ggattacagg cacatgccac 1200 cattcctggt aatatttgtt cctgtaaaat agacaagggc tggggaaatt gtttagtgag 1260 taaagtactt gtataagtgt gagagcctga gtttgcatct tcagcataaa ctttaggcat 1320 ggcagtgtgt atttaaatcc ttgtgcctat gatgatattg gaagatgtag atagaattcc 1380 ctggaagaca ttggactaag cagcctagta ttcacaacag tgaatggtaa aaatacctgt 1440 taccaagcaa ggtaaaaagt aaggatatag ctcactatag gatccatggc tatattcaca 1500 tgagtacatg gagatatata ggtagaatgt gataatctta acaatgtctt aaatgatagc 1560 gaataaatct aaaaat 1576 // |
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