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EBI DbfetchID AK013902; SV 1; linear; mRNA; HTC; MUS; 1543 BP. XX AC AK013902; XX DT 08-FEB-2001 (Rel. 66, Created) DT 23-SEP-2008 (Rel. 97, Last updated, Version 20) XX DE Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, DE clone:3010033I03 product:UBIQUITIN-CONJUGATING ENZYME E2 G1 (EC 6.3.2.19) DE (UBIQUITIN-PROTEIN LIGASE G1) (UBIQUITIN CARRIER PROTEIN G1) homolog [Homo DE sapiens], full insert sequence. XX KW CAP trapper; HTC; HTC_FLI. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Mus. XX RN [1] RP 1-1543 RA Adachi J., Aizawa K., Akahira S., Akimura T., Arai A., Aono H., Arakawa T., RA Bono H., Carninci P., Fukuda S., Fukunishi Y., Furuno M., Hanagaki T., RA Hara A., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Imotani K., RA Ishii Y., Itoh M., Izawa M., Kasukawa T., Kato H., Kawai J., Kojima Y., RA Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A., RA Nishi K., Nomura K., Numazaki R., Ohno M., Okazaki Y., Okido T., Owa C., RA Saito H., Saito R., Sakai C., Sakai K., Sano H., Sasaki D., Shibata K., RA Shibata Y., Shinagawa A., Shiraki T., Sogabe Y., Suzuki H., Tagami M., RA Tagawa A., Takahashi F., Tanaka T., Tejima Y., Toya T., Yamamura T., RA Yasunishi A., Yoshida K., Yoshino M., Muramatsu M., Hayashizaki Y.; RT ; RL Submitted (10-JUL-2000) to the EMBL/GenBank/DDBJ databases. RL Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical RL Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 RL Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL RL :http://www.osc.riken.jp/ XX RN [2] RX DOI; 10.1126/science.1112014 RX PUBMED; 16141072. RG The FANTOM Consortium, Riken Genome Exploration Research Group and Genome RG Science Group (Genome Network Project Core Group) RA ; RT "The transcriptional landscape of the mammalian genome."; RL Science 309(5740):1559-1563(2005). XX RN [3] RG RIKEN Genome Exploration Research Group and Genome Science Group (Genome RG Network Project Core Group) and the FANTOM Consortium RA ; RT "Antisense Transcription in the Mammalian Transcriptome"; RL Science 309:1564-1566(2005). XX RN [4] RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase RG I and II Team RA ; RT "Analysis of the mouse transcriptome based on functional annotation of RT 60,770 full-length cDNAs"; RL Nature 420:563-573(2002). XX RN [5] RX DOI; 10.1038/35055500 RX PUBMED; 11217851. RA RIKEN FANTOM Consortium; RT "Functional annotation of a full-length mouse cDNA collection"; RL Nature 409(6821):685-690(2001). XX RN [6] RX DOI; 10.1016/S0076-6879(99)03004-9 RX PUBMED; 10349636. RA Carninci P., Hayashizaki Y.; RT "High-efficiency full-length cDNA cloning"; RL Meth. Enzymol. 303:19-44(1999). XX RN [7] RX DOI; 10.1101/gr.145100 RX PUBMED; 11042159. RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.; RT "Normalization and subtraction of cap-trapper-selected cDNAs to prepare RT full-length cDNA libraries for rapid discovery of new genes"; RL Genome Res. 10(10):1617-1630(2000). XX RN [8] RX DOI; 10.1101/gr.152600 RX PUBMED; 11076861. RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., RA Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R., RA Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., RA Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., RA Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., RA Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.; RT "RIKEN integrated sequence analysis (RISA) system--384-format sequencing RT pipeline with 384 multicapillary sequencer"; RL Genome Res. 10(11):1757-1771(2000). XX DR ASTD; TRAN00000160613. DR Ensembl-Gn; ENSMUSG00000020794; Mus_musculus. DR Ensembl-Tr; ENSMUST00000021148; Mus_musculus. XX CC cDNA library was prepared and sequenced in Mouse Genome CC Encyclopedia Project of Genome Exploration Research Group in Riken CC Genomic Sciences Center and Genome Science Laboratory in RIKEN. CC Division of Experimental Animal Research in Riken contributed to CC prepare mouse tissues. CC Please visit our web site for further details. CC URL:http://www.osc.riken.jp/ CC URL:http://fantom.gsc.riken.jp/ XX FH Key Location/Qualifiers FH FT source 1..1543 FT /organism="Mus musculus" FT /strain="C57BL/6J" FT /mol_type="mRNA" FT /dev_stage="12 days embryo" FT /clone_lib="RIKEN full-length enriched mouse cDNA library" FT /clone="3010033I03" FT /tissue_type="head" FT /db_xref="taxon:10090" FT CDS 211..723 FT /codon_start=1 FT /transl_table=1 FT /note="UBIQUITIN-CONJUGATING ENZYME E2 G1 (EC 6.3.2.19) FT (UBIQUITIN-PROTEIN LIGASE G1) (UBIQUITIN CARRIER PROTEIN FT G1) homolog [Homo sapiens] (SWISSPROT|Q99462, evidence: FT FASTY, 100%ID, 100%length, match=510)" FT /note="putative" FT /db_xref="GDB:1230511" FT /db_xref="GOA:P62254" FT /db_xref="HSSP:1PZV" FT /db_xref="InterPro:IPR000608" FT /db_xref="MGI:1914378" FT /db_xref="UniProtKB/Swiss-Prot:P62254" FT /protein_id="BAB29048.1" FT /translation="MTELQSALLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGP FT PDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGY FT EKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRK FT SQETAFE" XX SQ Sequence 1543 BP; 431 A; 324 C; 328 G; 459 T; 1 other; gttccgggcg tgaggcgctg agcgaggaaa gccgagcgga ggganctcgc ataggcggcg 60 aggtgcttct cgggtctccc aagaccggcc tccccgcggc ttcggcgctc cggtccgggt 120 tcctcaacac acatctagct ccaggcaccg gcagagcttg tcgccagtcc gtcgaagtcc 180 cggtggcggc ccgggctctc ggtggggagg atgacggagc tgcagtcggc gctgctactg 240 cgaagacagc tggcagaact caacaaaaat ccagtggaag gcttttcagc aggtttaata 300 gacgacaatg atctctatcg ttgggaagtc cttattattg gtcctccaga tacactttat 360 gaaggtggtg tttttaaggc tcatctcact ttcccaaaag attatcccct ccggcctcct 420 aaaatgaaat tcattacaga gatttggcac ccaaatgttg ataaaaatgg tgatgtttgc 480 atttctattc ttcatgagcc tggggaggat aaatatggtt atgagaagcc agaggaacgc 540 tggttaccta tccatactgt ggaaaccatc atgattagtg tcatttctat gctggcagat 600 cctaatggag actcacctgc aaatgtagat gctgcgaaag aatggaggga agacagaaac 660 ggagaattta aaaggaaagt tgcccgctgt gtaagaaaaa gccaagaaac tgcttttgag 720 tgatgtatat tcaatagtta gtaacttcac ttatttcagg gtctccaatt gagaacatgg 780 cactgttttt cctgcactct acccacctat tgctggactt ctgttgtaat aagttggcaa 840 gctctggctg gaactgggct gcaataaaac atgccagtca ttaatgctga caagagccta 900 acaagtgcca actaaagatg attacgcatt ttgaattcta atgaactgtt ttaactttca 960 ggaagaattg taaagacatg tacatagcac aacatgatcc ggataatata tatactgttc 1020 atgtacatcc acaaacacac cttgtaccaa ataatgcttt cttgtagtag aataagaatc 1080 gtgtaaattc taaaagactt tagcgggttt tcttttccca ttcattgttt tttatcagtt 1140 caaaaagatt ccttaaagca tgtcaggtga aaaccaataa ggatgaaaag tttccatata 1200 atttccttta aaccattgag tctttcatta cattctttcc atttactaat cttttatatt 1260 ttctttgttt tgtcacaccc ccctttcctt ttatctctga tatctgccag aaagttctca 1320 aatcatttag ttaaaatact gaaatactag taaattactt gagtttttca cgatgacttc 1380 agaggagggg tcatcactag gtgctttgtc ctttttgtac tatgattcac ccatctcttg 1440 gattggatgt agcaataaca ttctctggct gttgagaact cttgatccta gtcattatct 1500 cctgagaact ttaaaaataa aatgtaaagg ctgttctaag ttc 1543 // |
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