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EBI DbfetchID AK004176; SV 1; linear; mRNA; HTC; MUS; 640 BP. XX AC AK004176; XX DT 08-FEB-2001 (Rel. 66, Created) DT 23-SEP-2008 (Rel. 97, Last updated, Version 20) XX DE Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched DE library, clone:1110039O14 product:18 DAYS EMBRYO WHOLE BODY CDNA, RIKEN DE FULL-LENGTH ENRICHED LIBRARY, CLONE:1110039O14:ACYLPHOSPHATASE, DE ORGAN-COMMON TYPE ISOZYME (EC 3.6.1.7) (ACYLPHOSPHATE PHOSPHOHYDROLASE), DE FULL INSERT SEQUENCE homolog [Mus musculus], full insert sequence. XX KW CAP trapper; HTC; HTC_FLI. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Mus. XX RN [1] RP 1-640 RA Adachi J., Aizawa K., Akahira S., Akimura T., Arai A., Aono H., Arakawa T., RA Bono H., Carninci P., Fukuda S., Fukunishi Y., Furuno M., Hanagaki T., RA Hara A., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Imotani K., RA Ishii Y., Itoh M., Izawa M., Kasukawa T., Kato H., Kawai J., Kojima Y., RA Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A., RA Nishi K., Nomura K., Numazaki R., Ohno M., Okazaki Y., Okido T., Owa C., RA Saito H., Saito R., Sakai C., Sakai K., Sano H., Sasaki D., Shibata K., RA Shibata Y., Shinagawa A., Shiraki T., Sogabe Y., Suzuki H., Tagami M., RA Tagawa A., Takahashi F., Tanaka T., Tejima Y., Toya T., Yamamura T., RA Yasunishi A., Yoshida K., Yoshino M., Muramatsu M., Hayashizaki Y.; RT ; RL Submitted (10-JUL-2000) to the EMBL/GenBank/DDBJ databases. RL Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical RL Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 RL Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL RL :http://www.osc.riken.jp/ XX RN [2] RX DOI; 10.1126/science.1112014 RX PUBMED; 16141072. RG The FANTOM Consortium, Riken Genome Exploration Research Group and Genome RG Science Group (Genome Network Project Core Group) RA ; RT "The transcriptional landscape of the mammalian genome."; RL Science 309(5740):1559-1563(2005). XX RN [3] RG RIKEN Genome Exploration Research Group and Genome Science Group (Genome RG Network Project Core Group) and the FANTOM Consortium RA ; RT "Antisense Transcription in the Mammalian Transcriptome"; RL Science 309:1564-1566(2005). XX RN [4] RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase RG I and II Team RA ; RT "Analysis of the mouse transcriptome based on functional annotation of RT 60,770 full-length cDNAs"; RL Nature 420:563-573(2002). XX RN [5] RX DOI; 10.1038/35055500 RX PUBMED; 11217851. RA RIKEN FANTOM Consortium; RT "Functional annotation of a full-length mouse cDNA collection"; RL Nature 409(6821):685-690(2001). XX RN [6] RX DOI; 10.1016/S0076-6879(99)03004-9 RX PUBMED; 10349636. RA Carninci P., Hayashizaki Y.; RT "High-efficiency full-length cDNA cloning"; RL Meth. Enzymol. 303:19-44(1999). XX RN [7] RX DOI; 10.1101/gr.145100 RX PUBMED; 11042159. RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.; RT "Normalization and subtraction of cap-trapper-selected cDNAs to prepare RT full-length cDNA libraries for rapid discovery of new genes"; RL Genome Res. 10(10):1617-1630(2000). XX RN [8] RX DOI; 10.1101/gr.152600 RX PUBMED; 11076861. RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., RA Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R., RA Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., RA Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., RA Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., RA Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.; RT "RIKEN integrated sequence analysis (RISA) system--384-format sequencing RT pipeline with 384 multicapillary sequencer"; RL Genome Res. 10(11):1757-1771(2000). XX DR ASTD; TRAN00000133723. DR Ensembl-Gn; ENSMUSG00000008822; Mus_musculus. DR Ensembl-Tr; ENSMUST00000008966; Mus_musculus. DR Ensembl-Tr; ENSMUST00000065913; Mus_musculus. DR Ensembl-Tr; ENSMUST00000117138; Mus_musculus. XX CC cDNA library was prepared and sequenced in Mouse Genome CC Encyclopedia Project of Genome Exploration Research Group in Riken CC Genomic Sciences Center and Genome Science Laboratory in RIKEN. CC Division of Experimental Animal Research in Riken contributed to CC prepare mouse tissues. CC Please visit our web site for further details. CC URL:http://www.osc.riken.jp/ CC URL:http://fantom.gsc.riken.jp/ XX FH Key Location/Qualifiers FH FT source 1..640 FT /organism="Mus musculus" FT /strain="C57BL/6J" FT /mol_type="mRNA" FT /dev_stage="18-day embryo" FT /clone_lib="RIKEN full-length enriched mouse cDNA library" FT /clone="1110039O14" FT /tissue_type="whole body" FT /db_xref="taxon:10090" FT CDS 135..434 FT /codon_start=1 FT /transl_table=1 FT /note="18 DAYS EMBRYO WHOLE BODY CDNA, RIKEN FULL-LENGTH FT ENRICHED LIBRARY, CLONE:1110039O14:ACYLPHOSPHATASE, FT ORGAN-COMMON TYPE ISOZYME (EC 3.6.1.7) (ACYLPHOSPHATE FT PHOSPHOHYDROLASE), FULL INSERT SEQUENCE homolog [Mus FT musculus] (SPTR|BAB23208, evidence: FASTY, 100%ID, FT 100%length, match=297)" FT /note="putative" FT /db_xref="GOA:P56376" FT /db_xref="InterPro:IPR001792" FT /db_xref="InterPro:IPR017968" FT /db_xref="InterPro:IPR020456" FT /db_xref="MGI:1913454" FT /db_xref="UniProtKB/Swiss-Prot:P56376" FT /protein_id="BAB23208.1" FT /translation="MAEGDTLVSVDYEIFGKVQGVFFRKYTQAEGKKLGLVGWVQNTDR FT GTVQGQLQGPVSKVRFMQQWLETRGSPKSHIDRANFNNEKVIANLDYSDFQIVK" FT polyA_signal 620..625 FT /note="putative" FT polyA_site 640 FT /note="putative" XX SQ Sequence 640 BP; 190 A; 128 C; 155 G; 167 T; 0 other; gctctaaact tccggaagtg gcggttaaca cggctcgggc ggttgatctg aaggtcttcg 60 gggctgttca gcggctcctg gggaagcccc agaaactcga gcttccgccg ctcggatcat 120 ccaagtgttt gagcatggca gaaggggaca ccttggtctc agtggattac gaaatttttg 180 gaaaggttca aggggtgttt ttccgcaagt acactcaggc tgagggtaaa aagctaggtt 240 tggtgggctg ggttcagaac accgaccggg gcaccgtgca agggcaactg cagggccccg 300 tctccaaggt gcgcttcatg cagcagtggc tggagaccag aggaagtccc aagtcgcaca 360 ttgacagagc aaacttcaac aatgagaaag tcatcgcaaa cttggattat tcagacttcc 420 aaattgtaaa ataatgaaac gaatcttaat attttttcaa aataatctca ctcctttttt 480 taaatcgcta gattaaaaaa aaaatagaac tattctgtgc tcagtattag aatttgttag 540 taagttattt tggttgcatg ttggaaaagt taccacgtat tacaagtatg atgaaataca 600 aatgtgtata attctaacca ataaaaacac attagaacct 640 // |
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