 |
|
EBI DbfetchID AK003598; SV 1; linear; mRNA; HTC; MUS; 605 BP. XX AC AK003598; XX DT 08-FEB-2001 (Rel. 66, Created) DT 07-OCT-2008 (Rel. 97, Last updated, Version 20) XX DE Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched DE library, clone:1110008P14 product:HYPOTHETICAL PROTEIN EST00098 homolog DE [Mus musculus], full insert sequence. XX KW CAP trapper; HTC; HTC_FLI. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Mus. XX RN [1] RP 1-605 RA Adachi J., Aizawa K., Akahira S., Akimura T., Arai A., Aono H., Arakawa T., RA Bono H., Carninci P., Fukuda S., Fukunishi Y., Furuno M., Hanagaki T., RA Hara A., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Imotani K., RA Ishii Y., Itoh M., Izawa M., Kasukawa T., Kato H., Kawai J., Kojima Y., RA Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A., RA Nishi K., Nomura K., Numazaki R., Ohno M., Okazaki Y., Okido T., Owa C., RA Saito H., Saito R., Sakai C., Sakai K., Sano H., Sasaki D., Shibata K., RA Shibata Y., Shinagawa A., Shiraki T., Sogabe Y., Suzuki H., Tagami M., RA Tagawa A., Takahashi F., Tanaka T., Tejima Y., Toya T., Yamamura T., RA Yasunishi A., Yoshida K., Yoshino M., Muramatsu M., Hayashizaki Y.; RT ; RL Submitted (10-JUL-2000) to the EMBL/GenBank/DDBJ databases. RL Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical RL Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 RL Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL RL :http://www.osc.riken.jp/ XX RN [2] RX DOI; 10.1126/science.1112014 RX PUBMED; 16141072. RG The FANTOM Consortium, Riken Genome Exploration Research Group and Genome RG Science Group (Genome Network Project Core Group) RA ; RT "The transcriptional landscape of the mammalian genome."; RL Science 309(5740):1559-1563(2005). XX RN [3] RG RIKEN Genome Exploration Research Group and Genome Science Group (Genome RG Network Project Core Group) and the FANTOM Consortium RA ; RT "Antisense Transcription in the Mammalian Transcriptome"; RL Science 309:1564-1566(2005). XX RN [4] RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase RG I and II Team RA ; RT "Analysis of the mouse transcriptome based on functional annotation of RT 60,770 full-length cDNAs"; RL Nature 420:563-573(2002). XX RN [5] RX DOI; 10.1038/35055500 RX PUBMED; 11217851. RA RIKEN FANTOM Consortium; RT "Functional annotation of a full-length mouse cDNA collection"; RL Nature 409(6821):685-690(2001). XX RN [6] RX DOI; 10.1016/S0076-6879(99)03004-9 RX PUBMED; 10349636. RA Carninci P., Hayashizaki Y.; RT "High-efficiency full-length cDNA cloning"; RL Meth. Enzymol. 303:19-44(1999). XX RN [7] RX DOI; 10.1101/gr.145100 RX PUBMED; 11042159. RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.; RT "Normalization and subtraction of cap-trapper-selected cDNAs to prepare RT full-length cDNA libraries for rapid discovery of new genes"; RL Genome Res. 10(10):1617-1630(2000). XX RN [8] RX DOI; 10.1101/gr.152600 RX PUBMED; 11076861. RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., RA Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R., RA Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., RA Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., RA Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., RA Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.; RT "RIKEN integrated sequence analysis (RISA) system--384-format sequencing RT pipeline with 384 multicapillary sequencer"; RL Genome Res. 10(11):1757-1771(2000). XX DR ASTD; TRAN00000123481. DR Ensembl-Gn; ENSMUSG00000039195; Mus_musculus. DR Ensembl-Tr; ENSMUST00000048792; Mus_musculus. DR InterPro; IPR005374; UPF0184. DR MGI; 1920987; 1110008P14Rik. DR UniProtKB/Swiss-Prot; P58686; CI016_MOUSE. XX CC cDNA library was prepared and sequenced in Mouse Genome CC Encyclopedia Project of Genome Exploration Research Group in Riken CC Genomic Sciences Center and Genome Science Laboratory in RIKEN. CC Division of Experimental Animal Research in Riken contributed to CC prepare mouse tissues. CC Please visit our web site for further details. CC URL:http://www.osc.riken.jp/ CC URL:http://fantom.gsc.riken.jp/ XX FH Key Location/Qualifiers FH FT source 1..605 FT /organism="Mus musculus" FT /strain="C57BL/6J" FT /mol_type="mRNA" FT /dev_stage="18-day embryo" FT /clone_lib="RIKEN full-length enriched mouse cDNA library" FT /clone="1110008P14" FT /tissue_type="whole body" FT /db_xref="taxon:10090" FT misc_feature 1..605 FT /note="HYPOTHETICAL PROTEIN EST00098 homolog [Mus musculus] FT (SWISSPROT|P58686, evidence: FASTY, 100%ID, 100%length, FT match=249)" FT /note="putative" XX SQ Sequence 605 BP; 116 A; 208 C; 160 G; 121 T; 0 other; ggctcaacca gctgctcgca ccttccgccc agcgccggct ttccgcgcga cgatcgccaa 60 gttccatctt cgcgtggcct ctgcggcgcc cgagcccgca atgtcgggcc ccaacgggga 120 cctaggcatg ccggtggatg cgggcacgga aggagagaat gacagcttcg gggaagcaga 180 gtatgctgcc atcaactcca tgttggatca gatcaactct tgtctggacc acctggagga 240 gaagaatgac cacctccatg cccgcctcca ggagctgctg gagtcgaacc ggcagacgcg 300 cctggaattc cagcaacagc ttggggaggc ccctggcgat gccagcccct aggtgccggg 360 agcccccatc caggccctac cctcacctct ctaggccatg ttctggcctg ggtagatact 420 acttggctta gacaccatct cgggtactgg cctccagatc ctagtgggtc taccagcctg 480 gaccagtccc cattcactgc ccatcaccct tcctggagtc aggtgcaatc ctacagttct 540 cccacttgtc tgtcttcttt cccctccatc cagactgaga gtccgaatta aagatgtctc 600 ccacg 605 // |
|