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EBI DbfetchID AK002791; SV 1; linear; mRNA; HTC; MUS; 577 BP. XX AC AK002791; XX DT 08-FEB-2001 (Rel. 66, Created) DT 23-SEP-2008 (Rel. 97, Last updated, Version 19) XX DE Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, DE clone:0610038D11 product:similar to ADRENAL GLAND PROTEIN AD-001 (HSPC170 DE PROTEIN) (HSPC152) (HYPOTHETICAL 14.2 KDA PROTEIN) [Homo sapiens], full DE insert sequence. XX KW CAP trapper; HTC; HTC_FLI. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Mus. XX RN [1] RP 1-577 RA Adachi J., Aizawa K., Akahira S., Akimura T., Arai A., Aono H., Arakawa T., RA Bono H., Carninci P., Fukuda S., Fukunishi Y., Furuno M., Hanagaki T., RA Hara A., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Imotani K., RA Ishii Y., Itoh M., Izawa M., Kasukawa T., Kato H., Kawai J., Kojima Y., RA Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A., RA Nishi K., Nomura K., Numazaki R., Ohno M., Okazaki Y., Okido T., Owa C., RA Saito H., Saito R., Sakai C., Sakai K., Sano H., Sasaki D., Shibata K., RA Shibata Y., Shinagawa A., Shiraki T., Sogabe Y., Suzuki H., Tagami M., RA Tagawa A., Takahashi F., Tanaka T., Tejima Y., Toya T., Yamamura T., RA Yasunishi A., Yoshida K., Yoshino M., Muramatsu M., Hayashizaki Y.; RT ; RL Submitted (10-JUL-2000) to the EMBL/GenBank/DDBJ databases. RL Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical RL Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 RL Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL RL :http://www.osc.riken.jp/ XX RN [2] RX DOI; 10.1126/science.1112014 RX PUBMED; 16141072. RG The FANTOM Consortium, Riken Genome Exploration Research Group and Genome RG Science Group (Genome Network Project Core Group) RA ; RT "The transcriptional landscape of the mammalian genome."; RL Science 309(5740):1559-1563(2005). XX RN [3] RG RIKEN Genome Exploration Research Group and Genome Science Group (Genome RG Network Project Core Group) and the FANTOM Consortium RA ; RT "Antisense Transcription in the Mammalian Transcriptome"; RL Science 309:1564-1566(2005). XX RN [4] RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase RG I and II Team RA ; RT "Analysis of the mouse transcriptome based on functional annotation of RT 60,770 full-length cDNAs"; RL Nature 420:563-573(2002). XX RN [5] RX DOI; 10.1038/35055500 RX PUBMED; 11217851. RA RIKEN FANTOM Consortium; RT "Functional annotation of a full-length mouse cDNA collection"; RL Nature 409(6821):685-690(2001). XX RN [6] RX DOI; 10.1016/S0076-6879(99)03004-9 RX PUBMED; 10349636. RA Carninci P., Hayashizaki Y.; RT "High-efficiency full-length cDNA cloning"; RL Meth. Enzymol. 303:19-44(1999). XX RN [7] RX DOI; 10.1101/gr.145100 RX PUBMED; 11042159. RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.; RT "Normalization and subtraction of cap-trapper-selected cDNAs to prepare RT full-length cDNA libraries for rapid discovery of new genes"; RL Genome Res. 10(10):1617-1630(2000). XX RN [8] RX DOI; 10.1101/gr.152600 RX PUBMED; 11076861. RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., RA Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R., RA Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., RA Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., RA Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., RA Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.; RT "RIKEN integrated sequence analysis (RISA) system--384-format sequencing RT pipeline with 384 multicapillary sequencer"; RL Genome Res. 10(11):1757-1771(2000). XX DR Ensembl-Gn; ENSMUSG00000038812; Mus_musculus. DR Ensembl-Tr; ENSMUST00000116551; Mus_musculus. XX CC cDNA library was prepared and sequenced in Mouse Genome CC Encyclopedia Project of Genome Exploration Research Group in Riken CC Genomic Sciences Center and Genome Science Laboratory in RIKEN. CC Division of Experimental Animal Research in Riken contributed to CC prepare mouse tissues. CC Please visit our web site for further details. CC URL:http://www.osc.riken.jp/ CC URL:http://fantom.gsc.riken.jp/ XX FH Key Location/Qualifiers FH FT source 1..577 FT /organism="Mus musculus" FT /strain="C57BL/6J" FT /mol_type="mRNA" FT /sex="male" FT /dev_stage="adult" FT /clone_lib="RIKEN full-length enriched mouse cDNA library" FT /clone="0610038D11" FT /tissue_type="kidney" FT /db_xref="taxon:10090" FT CDS 35..412 FT /codon_start=1 FT /transl_table=1 FT /note="putative" FT /note="similar to ADRENAL GLAND PROTEIN AD-001 (HSPC170 FT PROTEIN) (HSPC152) (HYPOTHETICAL 14.2 KDA PROTEIN) [Homo FT sapiens] (SPTR|Q9UI30, evidence: FASTY, 80.8%ID, FT 100%length, match=375)" FT /db_xref="InterPro:IPR005651" FT /db_xref="MGI:1914924" FT /db_xref="UniProtKB/Swiss-Prot:Q9DCG9" FT /protein_id="BAB22361.1" FT /translation="MKLLTHNLLSSHVRGVGTRGFPLRLQATEVRINPVEFNPEFVARM FT IPKVEWAALVQAADTLNLAEVPKEPTEGYEHDETFLRKMHHVLLEVDVLEGTLQCPESG FT RLFPISRGIPNMLLNDEETET" FT polyA_signal 561..566 FT /note="putative" FT polyA_site 577 FT /note="putative" XX SQ Sequence 577 BP; 121 A; 162 C; 155 G; 139 T; 0 other; cgggttccgg cctcacgcgc tccgctgtga caacatgaaa ctgctcaccc acaatctcct 60 aagctcccat gtgcggggcg tgggcacgcg tggcttcccg ctgcgcctgc aggccactga 120 ggtccgcatc aaccccgtgg agttcaaccc ggagttcgtg gcgcggatga tccccaaagt 180 ggagtgggcg gcgcttgtgc aggcagcgga caccttaaac ttggccgagg tacccaaaga 240 gccgactgaa ggctatgagc acgacgagac atttttgagg aagatgcacc acgtgttgct 300 tgaggttgat gtactggagg gcaccctgca atgcccagaa tctggtcgtc ttttccccat 360 cagccgcggg atccccaata tgctgttgaa tgatgaggag actgagacgt aaccttgcta 420 gccgccactt tggtattttg ttgactgtgt gtttctgttg tacggtctgt taaatagacg 480 tgtcatgtgt gacccccaaa ctccccccag tgactcaccg accaccgtgt acttgagctc 540 catagtatat tttttttctc attaaaggtt caaaacc 577 // |
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