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EBI Dbfetch

ID   AK002326; SV 1; linear; mRNA; HTC; MUS; 1555 BP.
XX
AC   AK002326;
XX
DT   08-FEB-2001 (Rel. 66, Created)
DT   23-SEP-2008 (Rel. 97, Last updated, Version 21)
XX
DE   Mus musculus adult male kidney cDNA, RIKEN full-length enriched library,
DE   clone:0610008E11 product:guanosine monophosphate reductase, full insert
DE   sequence.
XX
KW   CAP trapper; HTC; HTC_FLI.
XX
OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Mus.
XX
RN   [1]
RP   1-1555
RA   Adachi J., Aizawa K., Akahira S., Akimura T., Arai A., Aono H., Arakawa T.,
RA   Bono H., Carninci P., Fukuda S., Fukunishi Y., Furuno M., Hanagaki T.,
RA   Hara A., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Imotani K.,
RA   Ishii Y., Itoh M., Izawa M., Kasukawa T., Kato H., Kawai J., Kojima Y.,
RA   Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A.,
RA   Nishi K., Nomura K., Numazaki R., Ohno M., Okazaki Y., Okido T., Owa C.,
RA   Saito H., Saito R., Sakai C., Sakai K., Sano H., Sasaki D., Shibata K.,
RA   Shibata Y., Shinagawa A., Shiraki T., Sogabe Y., Suzuki H., Tagami M.,
RA   Tagawa A., Takahashi F., Tanaka T., Tejima Y., Toya T., Yamamura T.,
RA   Yasunishi A., Yoshida K., Yoshino M., Muramatsu M., Hayashizaki Y.;
RT   ;
RL   Submitted (10-JUL-2000) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical
RL   Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22
RL   Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL   
RL   :http://www.osc.riken.jp/
XX
RN   [2]
RX   DOI; 10.1126/science.1112014
RX   PUBMED; 16141072.
RG   The FANTOM Consortium, Riken Genome Exploration Research Group and Genome
RG   Science Group (Genome Network Project Core Group)
RA   ;
RT   "The transcriptional landscape of the mammalian genome.";
RL   Science 309(5740):1559-1563(2005).
XX
RN   [3]
RG   RIKEN Genome Exploration Research Group and Genome Science Group (Genome
RG   Network Project Core Group) and the FANTOM Consortium
RA   ;
RT   "Antisense Transcription in the Mammalian Transcriptome";
RL   Science 309:1564-1566(2005).
XX
RN   [4]
RG   The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase
RG   I and II Team
RA   ;
RT   "Analysis of the mouse transcriptome based on functional annotation of
RT   60,770 full-length cDNAs";
RL   Nature 420:563-573(2002).
XX
RN   [5]
RX   DOI; 10.1038/35055500
RX   PUBMED; 11217851.
RA   RIKEN FANTOM Consortium;
RT   "Functional annotation of a full-length mouse cDNA collection";
RL   Nature 409(6821):685-690(2001).
XX
RN   [6]
RX   DOI; 10.1016/S0076-6879(99)03004-9
RX   PUBMED; 10349636.
RA   Carninci P., Hayashizaki Y.;
RT   "High-efficiency full-length cDNA cloning";
RL   Meth. Enzymol. 303:19-44(1999).
XX
RN   [7]
RX   DOI; 10.1101/gr.145100
RX   PUBMED; 11042159.
RA   Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M.,
RA   Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.;
RT   "Normalization and subtraction of cap-trapper-selected cDNAs to prepare
RT   full-length cDNA libraries for rapid discovery of new genes";
RL   Genome Res. 10(10):1617-1630(2000).
XX
RN   [8]
RX   DOI; 10.1101/gr.152600
RX   PUBMED; 11076861.
RA   Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P.,
RA   Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N.,
RA   Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R.,
RA   Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S.,
RA   Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y.,
RA   Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y.,
RA   Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.;
RT   "RIKEN integrated sequence analysis (RISA) system--384-format sequencing
RT   pipeline with 384 multicapillary sequencer";
RL   Genome Res. 10(11):1757-1771(2000).
XX
DR   ASTD; TRAN00000178758.
DR   Ensembl-Gn; ENSMUSG00000000253; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000000260; Mus_musculus.
XX
CC   cDNA library was prepared and sequenced in Mouse Genome
CC   Encyclopedia Project of Genome Exploration Research Group in Riken
CC   Genomic Sciences Center and Genome Science Laboratory in RIKEN.
CC   Division of Experimental Animal Research in Riken contributed to
CC   prepare mouse tissues.
CC   Please visit our web site for further details.
CC   URL:http://www.osc.riken.jp/
CC   URL:http://fantom.gsc.riken.jp/
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1555
FT                   /organism="Mus musculus"
FT                   /strain="C57BL/6J"
FT                   /mol_type="mRNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /clone_lib="RIKEN full-length enriched mouse cDNA library"
FT                   /clone="0610008E11"
FT                   /tissue_type="kidney"
FT                   /db_xref="taxon:10090"
FT   CDS             190..1227
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /note="guanosine monophosphate reductase (MGD|MGI:1913605)"
FT                   /note="putative"
FT                   /db_xref="GOA:Q9DCZ1"
FT                   /db_xref="HSSP:1EEP"
FT                   /db_xref="InterPro:IPR001093"
FT                   /db_xref="MGI:1913605"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9DCZ1"
FT                   /protein_id="BAB22014.1"
FT                   /translation="MPRIDADLKLDFKDVLLRPKRSSLKSRSEVDLERTFTFRNSKQTY
FT                   SGIPIIVANMDTVGTFEMAVVMSQHAMFTAVHKHYSLDDWKCFAETHPECLQHVAVSSG
FT                   SGQNDLERMSRILEAVPQVKFICLDVANGYSEHFVEFVKLVRSKFPEHTIMAGNVVTGE
FT                   MVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGC
FT                   TCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGQKLKLFYGMSSDTAMKKHAGG
FT                   VAEYRASEGKTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQH
FT                   NTVFG"
XX
SQ   Sequence 1555 BP; 338 A; 434 C; 456 G; 327 T; 0 other;
     ggttggggaa cggagctggg ggctccgggt gcgcgggcat aagaacaagg cgtgcgcacc        60
     gggttcgcgg acacacagtc tgcgcacagc cacccgggcg ccactgtacg cacgcgcccc       120
     gcagctcccg gctgacgccg gccttcgcac cgcctccgcc gcaggaagct accgcgcacc       180
     gctagcacca tgccccgcat agacgcggac cttaaactcg acttcaagga tgttctgctg       240
     cgacctaagc ggagcagcct caagagccga tccgaggtgg atcttgagcg aacttttaca       300
     tttcgaaact cgaagcaaac ctactcaggg attcccatca ttgtggccaa catggacact       360
     gtggggacat ttgagatggc tgtggtgatg tcacagcatg ccatgtttac agccgttcac       420
     aagcactact ccctggatga ctggaaatgt tttgcggaaa cccaccccga atgcctgcag       480
     catgtagccg tgagttctgg cagcgggcag aatgatcttg agaggatgag ccgcatcttg       540
     gaagctgtgc ctcaggtgaa gttcatctgc ctggatgtgg ccaatgggta ttcagagcat       600
     tttgtggaat tcgtgaaact ggtccgatcc aaattccccg aacacaccat catggcaggg       660
     aacgtggtga ccggagagat ggtggaagag ctcatcctct ctggagcaga tatcatcaaa       720
     gtgggagtcg gaccaggttc tgtgtgcacc acccgaacca agacaggagt gggctacccg       780
     cagctgagtg cggtgataga gtgtgctgac tccgcccatg gcctcaaggg gcacatcatc       840
     tctgatggag gctgcacatg tccaggagat gtcgccaaag cctttggagc tggtgcagac       900
     tttgtcatgc tgggaggcat gttttcaggc cacaccgagt gtgcaggtga ggtgatcgag       960
     aggaacgggc agaagctgaa actcttctat ggcatgagct cagacacagc catgaagaaa      1020
     cacgcaggag gcgtcgccga gtacagggcc tccgagggca agaccgtgga agtgccttac      1080
     aaaggggacg tggagaacac cattctggat atccttggag gactgcgctc cacctgtacc      1140
     tacgtcgggg ctgccaagct caaagagctc agcaggagag ccacgttcat ccgggtgacc      1200
     caacagcaca acacggtgtt tggttaacct cggggatgca gacctcagtg ttgagccgag      1260
     tggaagcctc ctttcaccat gcttcgcccc tcccctcctt atctgccttg gcaggctggc      1320
     tgctatcaca gatgctgaga ctgagtcctt gtcctgatct tgtagcccga gaccttgggg      1380
     cttgccctag tgcctgtgtg gggcccagga gcagggcgct cgtggggccc cgggtcagct      1440
     cctagaactc atcgcctcct ggtgtcaacc agctccttgc accctccttt ctgtccgccg      1500
     ttagttttct ttctaaagga caatggttca cttttaatat aatgctatga tcttg           1555
//


  
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