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EBI Dbfetch

ID   AJ720933; SV 1; linear; mRNA; STD; VRT; 2797 BP.
XX
AC   AJ720933;
XX
DT   30-SEP-2004 (Rel. 81, Created)
DT   12-JAN-2005 (Rel. 82, Last updated, Version 2)
XX
DE   Gallus gallus mRNA for hypothetical protein, clone 30e5
XX
KW   ORF1.
XX
OS   Gallus gallus (chicken)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves;
OC   Neognathae; Galliformes; Phasianidae; Phasianinae; Gallus.
XX
RN   [1]
RP   1-2797
RA   Caldwell R.B.;
RT   ;
RL   Submitted (20-MAY-2004) to the EMBL/GenBank/DDBJ databases.
RL   Caldwell R.B., GSF - Forschungszentrum, Institut fuer Molekulare
RL   Strahlenbiologie, Ingolstaedter Landstr. 1, D-85764 Neuherberg, GERMANY.
XX
RN   [2]
RX   DOI; 10.1186/gb-2004-6-1-r6
RX   PUBMED; 15642098.
RA   Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA   Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA   Hayashizaki Y., Buerstedde J.M.;
RT   "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT   function analysis";
RL   Genome Biol. 6(1):R6-R6(2005).
XX
DR   Ensembl-Gn; ENSGALG00000000678; Gallus_gallus.
DR   Ensembl-Tr; ENSGALT00000003624; Gallus_gallus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2797
FT                   /organism="Gallus gallus"
FT                   /strain="CB"
FT                   /mol_type="mRNA"
FT                   /dev_stage="2 weeks old"
FT                   /clone_lib="riken1"
FT                   /clone="30e5"
FT                   /cell_type="lymphocyte"
FT                   /tissue_type="bursa"
FT                   /db_xref="taxon:9031"
FT   5'UTR           <1..14
FT                   /locus_tag="RCJMB04_30e5"
FT   CDS             15..1118
FT                   /locus_tag="RCJMB04_30e5"
FT                   /product="hypothetical protein"
FT                   /note="ORF1"
FT                   /db_xref="GOA:Q5ZI51"
FT                   /db_xref="InterPro:IPR005502"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5ZI51"
FT                   /protein_id="CAG32592.1"
FT                   /translation="MAAAGAGSGRAAVSRSRPPPARFRGCLAGALLGDCLGAVFEGRSV
FT                   VKLPDLLSFLRGLEPPGGEGEPAGSARRETLSYTDDTAMSRCVVQSLLAKREFDEVDMA
FT                   KRFAEEYKKEPNRGYGMAVVNVFKKLLSPQCSDVFEPARAQFNGKGSYGNGGAMRVAGI
FT                   PLTYSDVQDVKKFAKLSAELTHANSLGYNGAILQALAVHLALQGEVSRETFLEQLISHM
FT                   EDIEADDKSLTDARALGFEDLPFSRRLKKIKEFLELSSVPKEDVLFELGNGIAALRSVP
FT                   TAIYSFLRCMEADPDIPEHYNNLQRTIIYCISLGGDTNTIATMAGAIAGAYYGEEQVPP
FT                   SWEQSCEAFQETQKMANSLHELYCQQL"
FT   3'UTR           1119..>2797
FT                   /locus_tag="RCJMB04_30e5"
XX
SQ   Sequence 2797 BP; 669 A; 614 C; 800 G; 714 T; 0 other;
     gagcgcgacg caagatggcg gcggcgggcg cgggctcggg gcgcgcggcg gtgtcccgtt        60
     ctcggccccc tcccgcccgc ttccggggct gcttggcggg cgcgctgctg ggagactgcc       120
     tgggcgccgt cttcgagggc aggagcgtgg tgaagctgcc cgatctgctg agcttcctcc       180
     gcggcctgga gccgccgggc ggtgaggggg agccggccgg gagcgcccgc agagaaacgc       240
     tttcctacac ggacgacacg gccatgagca gatgtgtggt gcagtcactg ctggccaagc       300
     gggagtttga cgaagttgac atggccaaga ggtttgctga ggagtacaag aaggaaccca       360
     acaggggcta tgggatggct gtcgtcaatg tctttaagaa gctgctgagc ccccagtgca       420
     gtgatgtgtt tgagccagca agagctcagt ttaatgggaa aggctcctat ggaaatggtg       480
     gtgccatgag ggttgcaggc attccactca cctattctga tgttcaggat gttaagaagt       540
     ttgcaaagct cagtgctgag ttaacccatg ccaactcctt gggctacaac ggggccatcc       600
     tgcaggccct ggcagtgcat ctcgccttgc agggagaggt cagcagggag accttccttg       660
     agcagctcat tagccacatg gaggacatag aggcagatga taagtctctt actgatgccc       720
     gagcgctggg atttgaggac ttaccatttt caaggcgtct gaagaaaata aaggaatttt       780
     tggagctcag cagtgttccc aaagaggatg tactgtttga attaggcaac ggcatcgctg       840
     ctttgaggtc tgtccccact gccatttact ccttcctgcg ctgtatggaa gctgacccag       900
     atattcctga acactacaac aacctgcaga ggaccatcat ctactgtatc tctctggggg       960
     gagatacaaa caccattgct accatggcag gagccattgc aggggcttat tatggggaag      1020
     aacaggtacc cccgagttgg gagcagagct gtgaagcttt tcaagagaca cagaagatgg      1080
     ccaatagctt acatgaactg tactgccagc agctctgagc cctgaaggga gtgtgtctct      1140
     ggaaggcaaa gtaggtggtt gcctctgctt ttctggtcgt aaagttggtg gtggatccgt      1200
     gccatctgca gatgcagtga gcctccatcg aggagacacc tgctgctgtg agaggagagg      1260
     tggaagcaca agctagggtt gaagagatgg gacatggact tcactggcag ttttgctggg      1320
     aagtggctgc atgtggtgcc ttggacagtg ggggcatctc tgaagtacaa gagcatcgag      1380
     ttctctttgt cccacccttc tataactatg tcgttttgtt attcctaggt ggtgtctgaa      1440
     tccacagact tttttgctgt tttcccctac tgccctgtcc ttcattgctg ttggtagcaa      1500
     cctgtcaggc agtggctttc atgggatgca catccttaaa acactgacaa gtgcgtcttc      1560
     attctcaact gacaagcaaa aggatccggg tgggagcctt cagagaaaca ccccatggga      1620
     gagcctggag gatatcctgt gtggggggac agtttgcctc tgtcagtgtg aagatgctgc      1680
     agagcagagc tcacagggag gttcacttca ttaaaggcag aatgaaaagt gcctgagatt      1740
     ggagaaggga tttctttgca ttgctggtgg catttgaagt atgcctttgg tgcatgcata      1800
     cagaatccca gtaggtgaat tgttactgct ggaataatca tggaatcata gaatggtttg      1860
     ggttggaagg gatctttaga tcatccactt ccaaccccct cctttaggca ggggctacaa      1920
     gaaggtatag ctaattaccg tccctttggt gtcctttgct ctgcaatctg cctgacactg      1980
     ccctgattgc cttttgtgat cccttagata cctggcccac atttccacag ctactccagc      2040
     catttcttag tccctaatcc ccatattctg tgtttttaat tctgccctgt gtttgtcctg      2100
     agcaccaagg gaggttgctg tttaattctg tgggtggaga aaaatcgtgg agcgtagtgg      2160
     taagcaagga ctgaattctt ggttctgctg cagtgacaga aatggcttca gctgaaagca      2220
     ggagttactt ctcatagctt tcgaactctg cactctgtga aaagcatctg aaaataaagg      2280
     gaaaggttaa aagaagatga aaaggatgtt gggatttgaa gctggtactg ttggtaagaa      2340
     tattccagcg cagctgtgtt gttccagagg ttaaatctga aactcttgcc caagggagct      2400
     gatcagaaag ggaataatag cttgtgtatg acgtgtctga aggttacagg cttctaataa      2460
     ttaaaaccaa aagggaagag gcaagcagtc gtcatatgaa agcgtttgtg aacgtgaatg      2520
     tggcagtgca actctattat gtctcttatt gtgacactgg gatgtgaatg ttgtgcacaa      2580
     atggagttca ctgccttttg gaacagcaca tggctgctgt gtgcttcgga ctgcatgcac      2640
     gtgtggaaag tctgggtgtg tgtggggtca ttccagagct tcctgcctct gctcccttcc      2700
     agtgccagtc tgctgcgtga tgctttaatg ggttttactt gtttaaatga atatcttgtt      2760
     ctgaaaaaaa aaaaaaaaaa agaaaaaaaa aaaaaaa                               2797
//


  
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