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EBI Dbfetch

ID   AJ720784; SV 1; linear; mRNA; STD; VRT; 2965 BP.
XX
AC   AJ720784;
XX
DT   30-SEP-2004 (Rel. 81, Created)
DT   12-JAN-2005 (Rel. 82, Last updated, Version 2)
XX
DE   Gallus gallus mRNA for hypothetical protein, clone 25j21
XX
KW   ORF1.
XX
OS   Gallus gallus (chicken)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves;
OC   Neognathae; Galliformes; Phasianidae; Phasianinae; Gallus.
XX
RN   [1]
RP   1-2965
RA   Caldwell R.B.;
RT   ;
RL   Submitted (20-MAY-2004) to the EMBL/GenBank/DDBJ databases.
RL   Caldwell R.B., GSF - Forschungszentrum, Institut fuer Molekulare
RL   Strahlenbiologie, Ingolstaedter Landstr. 1, D-85764 Neuherberg, GERMANY.
XX
RN   [2]
RX   DOI; 10.1186/gb-2004-6-1-r6
RX   PUBMED; 15642098.
RA   Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA   Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA   Hayashizaki Y., Buerstedde J.M.;
RT   "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT   function analysis";
RL   Genome Biol. 6(1):R6-R6(2005).
XX
DR   Ensembl-Gn; ENSGALG00000014383; Gallus_gallus.
DR   Ensembl-Tr; ENSGALT00000023241; Gallus_gallus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2965
FT                   /organism="Gallus gallus"
FT                   /strain="CB"
FT                   /mol_type="mRNA"
FT                   /dev_stage="2 weeks old"
FT                   /clone_lib="riken1"
FT                   /clone="25j21"
FT                   /cell_type="lymphocyte"
FT                   /tissue_type="bursa"
FT                   /db_xref="taxon:9031"
FT   5'UTR           <1..110
FT                   /locus_tag="RCJMB04_25j21"
FT   CDS             111..1550
FT                   /locus_tag="RCJMB04_25j21"
FT                   /product="hypothetical protein"
FT                   /note="ORF1"
FT                   /db_xref="GOA:Q5ZIK0"
FT                   /db_xref="InterPro:IPR018936"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5ZIK0"
FT                   /protein_id="CAG32443.1"
FT                   /translation="MESGSEEPDEQLLLLSEPALHAGPPAGRAAPGGAVRLRGEPGLEE
FT                   EEEGEEDSGPEGDGEEEPLLRASGRGRRAGAARDKEPRVGAGHTGHAIDMNTFLDDPEF
FT                   AEIITRAEQVIECGVLPERISQGSSGSYFVKDCKGKTIGVFKPKSEEPYGHLNPKWTKY
FT                   FHKICCPCCFGRGCLVPNQGYLSEAGAYLVDDKLGLGVVPKTKVVWLVSETFNYSAIDR
FT                   AKSRGKKYALEKVPKVAKKFNRIGLPPKVGSFQLFVEGYKEADYWLRKFETDPLPENTR
FT                   KEFQSQFERLVILDYVIRNTDRGNDNWLVRYEKQDDGLNLSDKDIQWTVTEESTIKIAA
FT                   IDNGLAFPFKHPDEWRAYPFHWAWLSQAQVPFSQETRDLVLPRISDMNFVQDLCEDLHE
FT                   LFKTDKGFDKATFENQMSVMRGQILNLTQALKDGKSPIQLVQMPRVIVERSSTGSQGRI
FT                   VHLSNAFTQTFHSRKPFFSSW"
FT   3'UTR           1551..>2965
FT                   /locus_tag="RCJMB04_25j21"
XX
SQ   Sequence 2965 BP; 883 A; 527 C; 693 G; 862 T; 0 other;
     gccgtagcgc tggcgccgag agcgccatgg gctgcggtgg gggcgcctga gtccgcgttc        60
     gccgggcggc gcctcctccc cccgcgctcg gctcccggcc gcggccgcct atggagtcgg       120
     gttccgagga gcccgacgag cagctgctgc tcctgtcgga gccggcgctt cacgcggggc       180
     cgcccgcggg gagagccgcc cccggcgggg ccgtgaggct gcgcggggag ccggggctag       240
     aggaggaaga ggagggtgag gaggactcgg ggcccgaggg ggatggagag gaagagcctc       300
     tcctacgggc gtcgggccgc gggcgccgag cgggcgccgc ccgggataag gagccccgcg       360
     tcggcgcagg acatacagga catgctattg atatgaatac atttttagat gatccggaat       420
     ttgctgaaat tattacgaga gcagaacaag ttatagagtg tggagttttg ccggaaagaa       480
     tctctcaagg atccagtggg agttactttg tgaaggactg taaggggaaa actattggag       540
     tgttcaaacc aaaatctgaa gagccttatg gacatctaaa tcccaaatgg accaaatatt       600
     ttcacaaaat atgttgtcct tgctgctttg gcagaggctg ccttgttcca aatcagggct       660
     atctctctga agctggtgcc tatcttgtag atgacaagct ggggctagga gttgtaccca       720
     aaactaaggt tgtgtggctt gtcagcgaga cctttaatta cagtgcaata gatcgtgcga       780
     agtcaagagg aaaaaaatat gctttagaga aagtgccaaa agttgctaaa aaatttaatc       840
     gaattggact acctcctaag gttggctcct tccagctgtt tgttgaagga tataaggaag       900
     ctgactactg gctcaggaag tttgaaactg atcctttacc tgagaacaca aggaaagaat       960
     ttcagtcaca atttgaaaga ttggttatct tagattatgt catcagaaat acagacagag      1020
     gtaatgataa ctggctagtc aggtatgaaa agcaagacga tggacttaat ctgtcagata      1080
     aggatatcca atggactgta actgaagaat ctactattaa aattgctgca attgacaatg      1140
     gtttagcatt tccctttaag catcctgatg agtggagggc atatcccttt cattgggctt      1200
     ggctttctca agcacaagtt cccttctctc aggagaccag agacttggtt cttcctcgca      1260
     tctctgatat gaactttgta caggatcttt gtgaagatct tcatgaactg tttaagactg      1320
     ataaaggatt tgacaaggct acctttgaaa accaaatgtc tgttatgagg ggacagatac      1380
     taaaccttac tcaggcgtta aaggatggaa aaagccccat tcagcttgtt cagatgccac      1440
     gtgtgattgt ggagcgaagt agcactggaa gtcagggccg aattgttcat ctgagtaatg      1500
     cattcacaca gacctttcat agcaggaagc ctttcttttc ctcctggtag caacaaaaat      1560
     atgtgggaga gagtaagctt ctctaacttc ggtaagctac ttctgtgtaa aggctctgca      1620
     ataatgtact tctgctgtat accaagagct ccaactgccg tcacctcaga acttaaattc      1680
     taaagactta agaaatgtat tttgaatgta ataaaagttt acaatttttg tgtcaaaatc      1740
     gtgaactcat atgtcaggga atgagaagaa cttgtccata ctgtattttt ataggctgaa      1800
     ttaatgtatt ctaaataata ctcaagggaa gatgcacagt ttgcatatgc tgagaaacta      1860
     cttttaaatg caacaaattc tttttgttta atataaatgt gagaagctat aatctatcaa      1920
     tttcttttta tatgttcttt aaaaaaaaag tggaatgtgt tatttgattg agaaaatgct      1980
     ttttcttgga atttgcctca tattttaagc tgttaataga ttttcatagg ctatttactt      2040
     gaaaaaaagt aatgcacttc agaaaataaa aataataata attaaaaaat ccttgacaga      2100
     catgaaaggg gggggggggg ggggggggag gaaggatatg ctcgaagtag attttttgtt      2160
     gttgttgttc ttgcacgttg ggaccaaaaa tagttaaata gcttttagtt gaattacagc      2220
     aaaattcatc ccccgtaagt atgtacagtt tctactgtga caaaatgaac tgagtgtaca      2280
     ttttggaggg tgaaacttta tcagttgctt ttagaactct tgtattgaag tacatgtatg      2340
     gataaatgtg atacttcctt gtagatagat tacaacaaaa gaattgcaca atggtacagg      2400
     ttgggttttt ccttataact gtgttaattt gtagtcacca aagtggttct tcactattaa      2460
     tgacagaagc actattaatc acaaagctag tctgcctcct gaatttctat ccaaacacac      2520
     tgttattttt tgactgaaaa aaaaaatcca ccttactgta atatatagag catatctata      2580
     attggaccct caacaatgtc gtgctcattt gccaattttc atttatgttt aagttaagtg      2640
     acttaagact tgatagtcat gcttctagat ttgtagctta tgttatatga taaatgttta      2700
     ttttcataac ttttcggaca gtgaagacca ggaatgggag aaaaattgct gcttttatga      2760
     aagaaacttt cagtatttca gatattgctg tattttgtaa ttctaagcaa tattgttgaa      2820
     ctcaaatgct tgtattttat atagttttgg atgtaaatat tattgtagca tgtcagcaat      2880
     tcacatgatt aactgaagtg tttaagcctt aaatgttgaa aaataaaata aatgcagcgt      2940
     gatggaattc aaaaaaaaaa aaaaa                                            2965
//


  
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