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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ720772; SV 1; linear; mRNA; STD; VRT; 2134 BP.
XX
AC   AJ720772;
XX
DT   30-SEP-2004 (Rel. 81, Created)
DT   12-JAN-2005 (Rel. 82, Last updated, Version 2)
XX
DE   Gallus gallus mRNA for hypothetical protein, clone 25e21
XX
KW   ORF1.
XX
OS   Gallus gallus (chicken)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves;
OC   Neognathae; Galliformes; Phasianidae; Phasianinae; Gallus.
XX
RN   [1]
RP   1-2134
RA   Caldwell R.B.;
RT   ;
RL   Submitted (20-MAY-2004) to the EMBL/GenBank/DDBJ databases.
RL   Caldwell R.B., GSF - Forschungszentrum, Institut fuer Molekulare
RL   Strahlenbiologie, Ingolstaedter Landstr. 1, D-85764 Neuherberg, GERMANY.
XX
RN   [2]
RX   DOI; 10.1186/gb-2004-6-1-r6
RX   PUBMED; 15642098.
RA   Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA   Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA   Hayashizaki Y., Buerstedde J.M.;
RT   "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT   function analysis";
RL   Genome Biol. 6(1):R6-R6(2005).
XX
DR   Ensembl-Gn; ENSGALG00000002541; Gallus_gallus.
DR   Ensembl-Tr; ENSGALT00000007214; Gallus_gallus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2134
FT                   /organism="Gallus gallus"
FT                   /strain="CB"
FT                   /mol_type="mRNA"
FT                   /dev_stage="2 weeks old"
FT                   /clone_lib="riken1"
FT                   /clone="25e21"
FT                   /cell_type="lymphocyte"
FT                   /tissue_type="bursa"
FT                   /db_xref="taxon:9031"
FT   5'UTR           <1..35
FT                   /locus_tag="RCJMB04_25e21"
FT   CDS             36..596
FT                   /locus_tag="RCJMB04_25e21"
FT                   /product="hypothetical protein"
FT                   /note="ORF1"
FT                   /db_xref="GOA:Q5ZIL2"
FT                   /db_xref="InterPro:IPR000979"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5ZIL2"
FT                   /protein_id="CAG32431.1"
FT                   /translation="MAGHRLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLC
FT                   TKDTYDYLKTLAGDVHVVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLA
FT                   LLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYHALENNIIPSFVLMDIQAST
FT                   VVTYVYQLIGDDVKVERIEYKKS"
FT   3'UTR           597..>2134
FT                   /locus_tag="RCJMB04_25e21"
XX
SQ   Sequence 2134 BP; 653 A; 397 C; 425 G; 659 T; 0 other;
     gagcaggctc agcgggcggt gcggcgccga gcaggatggc cgggcacaga ttggtgttag        60
     tattaggaga tcttcacatt ccacatcgat gcaacagcct cccggccaag ttcaaaaagc       120
     tgctggttcc agggaagatc cagcacatcc tctgcacggg aaacctctgc accaaggaca       180
     cttatgacta cctcaagacc ctggctgggg atgttcatgt tgtcagaggg gactttgatg       240
     agaacctgaa ttatcctgaa cagaaagttg taactgttgg acagttcaaa attggtctga       300
     ttcacggcca ccaggtcatt ccctggggtg atatggccag cctggcactg ctacagaggc       360
     agtttgatgt ggacatcctc atttcaggac atacacacaa atttgaggca tttgaacatg       420
     aaaacaagtt ctatatcaat ccaggatcag ctacaggagc ttatcatgcc ttagagaaca       480
     acatcatccc gtcatttgtg ctgatggata tccaggcttc tacagtagtc acgtacgtct       540
     atcagctaat tggagatgat gtgaaagtag aaagaattga gtacaaaaaa tcttaaaata       600
     tatttgcttg tgtggtattt ttactgtctc attccatgca tgttactaca atccttgatt       660
     gctagtttac agaactacac ttaatgttta acagcttaac agtgtaactt catggtatgg       720
     taataacttt aaaacattgt tttcttcctt ttctgtatga atagatttgt aaaatgtgtc       780
     actaactgtt gaagtacagt tccttcatgt tgtcataaat tccccttcat aaaaaacaaa       840
     gctttatgaa ctgttcaaga tgcaacaatt gcacttggtt ttgagatgtc tgcctgtgtt       900
     ttcctttggc aatgcttatc agatgtcacc agaacagtgc atggagcttt caaaaagaag       960
     actgtaaaag gcttgaacca aaatagcaag gccccttgga ggcatgtttg gtttgcttca      1020
     aaatccattt gagatgtgga tttctcattc agtataatgt agtcttttaa cttaattgga      1080
     tatatttttg gaagaaaaaa aaaagtagaa tgaacacata ccttggagta gtgatttcac      1140
     tgcagaaagc tgaacctgag tctttttaat actcaaagca ccactgtgct ttaatgaacg      1200
     acagtctcat taaatctgtg aacagtgatg agctttcctt tatttatagc ttatatttga      1260
     tattacggct acccactttg ctctgtgtaa aaaggtttta aatgatgtaa ttccatacag      1320
     cacttgtact gctgacaaag gctaaaatgt tggttgttca ggaagactgg agcttttgtc      1380
     tctcctagtc tcaggtatct gcagggaact gaatgtattt taacagctct tgcttcttat      1440
     gactgctgat ttgccaatat aaataaagtt gtctctgcac aacatctgga gtttagaatg      1500
     gtggcctgtt gcctttgcat atgttgtcct tggcagtaaa agaaagggta gtgaagtgtt      1560
     tgtgcagaaa gccgtgctgt agttgtcaca aaggtttgtg tgatacaaat gagttatcca      1620
     taaagcccga aggatcagct agaaccttta gttctgtgtc attaactttg gctaaatgcc      1680
     ttacttctat ttgaaataaa cctgctttgc ttacaaaaag actcagtgtt tgagctcggt      1740
     aactcaggat gctgtggcta actgctgttt tgtgcagtga aatacacact ccttgaatgc      1800
     ctacagcagg aaaaacaaca tcaccaactt ttcttgacaa atttatctgt acatcaaagt      1860
     ttataagact ctaaggtcaa ttttgatatt taagtcagtt tatttgtgct cactgtaatt      1920
     aaaatcacaa tttgtatatt ttacatgaag ctgcctataa actatatttt acacgaagca      1980
     caatgcttcc agtttaaaac ttgatcacaa ttatgtaaaa ttatgtctgt gtgaacgaaa      2040
     tcttagtgaa cctaacagca ggcttcaaca tagagaaata atacagaatg aaataaaact      2100
     aatccttctt aaagtcagaa aaaaaaaaaa aaaa                                  2134
//
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