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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ720420; SV 1; linear; mRNA; STD; VRT; 1643 BP.
XX
AC   AJ720420;
XX
DT   30-SEP-2004 (Rel. 81, Created)
DT   12-JAN-2005 (Rel. 82, Last updated, Version 2)
XX
DE   Gallus gallus mRNA for hypothetical protein, clone 17f4
XX
KW   ORF1.
XX
OS   Gallus gallus (chicken)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves;
OC   Neognathae; Galliformes; Phasianidae; Phasianinae; Gallus.
XX
RN   [1]
RP   1-1643
RA   Caldwell R.B.;
RT   ;
RL   Submitted (20-MAY-2004) to the EMBL/GenBank/DDBJ databases.
RL   Caldwell R.B., GSF - Forschungszentrum, Institut fuer Molekulare
RL   Strahlenbiologie, Ingolstaedter Landstr. 1, D-85764 Neuherberg, GERMANY.
XX
RN   [2]
RX   DOI; 10.1186/gb-2004-6-1-r6
RX   PUBMED; 15642098.
RA   Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA   Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA   Hayashizaki Y., Buerstedde J.M.;
RT   "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT   function analysis";
RL   Genome Biol. 6(1):R6-R6(2005).
XX
DR   Ensembl-Gn; ENSGALG00000001691; Gallus_gallus.
DR   Ensembl-Tr; ENSGALT00000011921; Gallus_gallus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1643
FT                   /organism="Gallus gallus"
FT                   /strain="CB"
FT                   /mol_type="mRNA"
FT                   /dev_stage="2 weeks old"
FT                   /clone_lib="riken1"
FT                   /clone="17f4"
FT                   /cell_type="lymphocyte"
FT                   /tissue_type="bursa"
FT                   /db_xref="taxon:9031"
FT   5'UTR           <1..136
FT                   /locus_tag="RCJMB04_17f4"
FT   CDS             137..1414
FT                   /locus_tag="RCJMB04_17f4"
FT                   /product="hypothetical protein"
FT                   /note="ORF1"
FT                   /db_xref="GOA:Q5ZJL4"
FT                   /db_xref="InterPro:IPR010655"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5ZJL4"
FT                   /protein_id="CAG32079.1"
FT                   /translation="MADDGGDEKKQVAKFELERETELRFEVEASQTVQMELLTGMAEVF
FT                   GTELTRNKKFTFDAGAKVAVFTWHGCTVQLSGRTEVAYVSKDTPMLLYLNTHTALEQIR
FT                   RQAEREDERGPRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTM
FT                   GALYIERPADVEEGFSLQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRAS
FT                   VSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPK
FT                   SGGVVERSKDFRRECRDDRIREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLP
FT                   LGMSQEDNQLKLVPVTPGRDMVHHLLSVSMADSPDDNISETSVAGFIVVTGVDLERQVF
FT                   TVLSPAPRPLPKNFLLIMDIRFMDLK"
FT   3'UTR           1415..>1643
FT                   /locus_tag="RCJMB04_17f4"
XX
SQ   Sequence 1643 BP; 309 A; 496 C; 517 G; 321 T; 0 other;
     gaacgcgaca gccctgctag agtcccggta ggcgcgcgga acagctgtag gtgctgtcag        60
     gtactgtctg ttgcccggcc ccgggctcag ggtccatccc taccgcagtg ggcggtaggg       120
     tcgggccggg tccgcgatgg cggatgatgg cggcgatgag aagaagcagg tggcaaaatt       180
     cgagctcgag cgggagacag agctgcgttt cgaagtggag gcctcgcaga cggtgcagat       240
     ggagctgctc accggcatgg ctgaggtgtt tggcaccgag ctcacccgca acaagaaatt       300
     cacctttgac gccggtgcaa aggtggccgt cttcacctgg cacggctgca ccgtgcagct       360
     cagcgggcgc accgaggtgg cgtatgtctc caaggacacc cccatgctgc tctacctcaa       420
     cactcatacg gccctggagc agatacggcg gcaggcagag cgcgaggacg agcgggggcc       480
     ccgtgtcatg gtggtgggcc ccaccgatgt gggcaagtca accgtgtgcc gcctgctgct       540
     gaactatgct gtacgcctgg ggcgccggcc cacctttgtg gagctggacg tggggcaggg       600
     ctccgtctcc atccccggca ccatgggagc cctctacatt gagcggccgg ctgacgtgga       660
     ggagggcttc tccctgcagg ccccgctggt ctaccacttt ggctccacca cacctggcac       720
     caacatcaag ctctacaaca agatcacgtc ccgcctggct gatgtcttca accagcgatg       780
     tgaagtgaac cgccgtgcat cggtcagtgg ctgcgtcatc aacacgtgcg gctgggtgaa       840
     gggctcaggc taccaggcac tggtgcacgc cgcctcggcg tttgaggtag acgtggtggt       900
     ggtgctggac caggaacggc tctacaatga gcttaagagg gacctacccc actttgtgcg       960
     cactgttctg ctccccaaat ccggcggggt ggtggagcgc tccaaagact tcaggcggga      1020
     gtgccgagat gatcgcatca gggaatattt ctatggcttc cggggctgct tctaccccca      1080
     cgcctttgac gtcaagttct ctgatgttaa gatctacaag gtgggggctc ccaccatccc      1140
     cgactcctgc ctgccgctgg gcatgtcgca ggaggacaac cagttgaagc tggtgcccgt      1200
     gacgccaggg cgggacatgg tgcaccacct gttgagcgtc agcatggccg acagccccga      1260
     cgacaacatc tcagagacca gcgtggctgg cttcatcgtg gtcaccggcg tagacctgga      1320
     gcgccaggtc ttcactgtgc tctcgcctgc ccctcgccca ctgcccaaga acttcctcct      1380
     catcatggac atccgcttca tggacctgaa gtagctccag cagggatggg gcagggagtc      1440
     ctgagcagag gggacacgtg gggctgtccg tgtgcgtcca cgcgtagccc agcacttgtt      1500
     ctttgcccag cagctttcag gccctgggtt tgtgcccttg tgccagcggg cgcagctggt      1560
     gcgggaggcc acctctcgtt tttatatcct tttgtaacat ttgttattaa atctcacagc      1620
     ccttcggaaa aaaaaaaaaa aaa                                              1643
//
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