spacer
spacer

EBI Dbfetch

ID   AJ720289; SV 1; linear; mRNA; STD; VRT; 2487 BP.
XX
AC   AJ720289;
XX
DT   30-SEP-2004 (Rel. 81, Created)
DT   12-JAN-2005 (Rel. 82, Last updated, Version 2)
XX
DE   Gallus gallus mRNA for hypothetical protein, clone 14d17
XX
KW   ORF1.
XX
OS   Gallus gallus (chicken)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves;
OC   Neognathae; Galliformes; Phasianidae; Phasianinae; Gallus.
XX
RN   [1]
RP   1-2487
RA   Caldwell R.B.;
RT   ;
RL   Submitted (20-MAY-2004) to the EMBL/GenBank/DDBJ databases.
RL   Caldwell R.B., GSF - Forschungszentrum, Institut fuer Molekulare
RL   Strahlenbiologie, Ingolstaedter Landstr. 1, D-85764 Neuherberg, GERMANY.
XX
RN   [2]
RX   DOI; 10.1186/gb-2004-6-1-r6
RX   PUBMED; 15642098.
RA   Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA   Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA   Hayashizaki Y., Buerstedde J.M.;
RT   "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT   function analysis";
RL   Genome Biol. 6(1):R6-R6(2005).
XX
DR   Ensembl-Gn; ENSGALG00000006947; Gallus_gallus.
DR   Ensembl-Tr; ENSGALT00000035038; Gallus_gallus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2487
FT                   /organism="Gallus gallus"
FT                   /strain="CB"
FT                   /mol_type="mRNA"
FT                   /dev_stage="2 weeks old"
FT                   /clone_lib="riken1"
FT                   /clone="14d17"
FT                   /cell_type="lymphocyte"
FT                   /tissue_type="bursa"
FT                   /db_xref="taxon:9031"
FT   5'UTR           <1..70
FT                   /locus_tag="RCJMB04_14d17"
FT   CDS             71..1090
FT                   /locus_tag="RCJMB04_14d17"
FT                   /product="hypothetical protein"
FT                   /note="ORF1"
FT                   /db_xref="GOA:Q5ZJZ5"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5ZJZ5"
FT                   /protein_id="CAG31948.1"
FT                   /translation="MLATKLSRPLLNLPVKTLTVKNPGNSFRPVQRFCFPLLSSCGSRS
FT                   YASEVDQIGSRAVLTLGLDLPWPKHLHTKGFIIYAGCLQKNKGEGGSKDLDNMNSDRMR
FT                   TVQLNVCDSKEVDRAVEHVNSSLEDPEKGLWGLVNNAGISTFGEVEFTSMDTYMEVAEV
FT                   NLWGTVRTTKAFLPLIRRSKGRVVNISSMMGRMGSPARSPYCITKFGVEAFSDCLRYEM
FT                   QPQGVMVSIVEPGNFIAVTNLYSPERIKAIADKMWDELPEIVRKDYGRKYFDEQVSKME
FT                   TYCNSGSTDTSPVIESVAHALTSTAPYTRYHPMDYYWWLRMQIMTHMPAAISDRLYVY"
FT   3'UTR           1091..>2487
FT                   /locus_tag="RCJMB04_14d17"
XX
SQ   Sequence 2487 BP; 678 A; 581 C; 618 G; 610 T; 0 other;
     cagacccagc gcccgggacg cccgccggcc gcagagctaa ggaagagcag gctcgctgtt        60
     gatagggagc atgttggcaa ccaagctgtc ccggcctctc ctgaacctcc ctgtaaaaac       120
     cctgactgtg aagaatccag ggaacagctt cagacctgtg caaaggtttt gcttccccct       180
     cttgtcctca tgtggcagcc gctcttatgc aagtgaggtt gatcagattg gcagcagagc       240
     tgtgcttact ctgggtttgg atttgccttg gccaaagcac ctacatacta aaggcttcat       300
     tatctatgct ggctgcctgc aaaagaataa aggagagggt ggctccaagg atctggacaa       360
     tatgaacagt gaccgaatga gaactgtgca gctcaatgtc tgtgacagca aagaggtgga       420
     ccgagcagtg gagcatgtga atagcagcct ggaggaccca gagaaagggc tctgggggct       480
     ggttaacaat gctgggatct ccacgtttgg ggaggtagag ttcaccagca tggacaccta       540
     catggaagta gctgaagtga acctctgggg gaccgtgcga accaccaagg ctttcctccc       600
     actcatccgg aggtcaaagg gtcgtgtagt gaacatcagt agcatgatgg gtcggatggg       660
     cagtcctgcc cggtcaccgt actgcatcac caagtttggt gtggaagcct tctctgactg       720
     cctgcggtac gaaatgcagc cccagggggt gatggtcagc atcgtggagc ctggcaactt       780
     catagctgtc accaacctgt acagccccga gcgaatcaaa gccatcgccg ataagatgtg       840
     ggacgagctc cccgagatag tgcgcaaaga ctacggcaga aagtactttg atgagcaggt       900
     cagcaagatg gagacgtact gcaacagcgg ctcaacagac acctcccccg tcattgaaag       960
     cgtcgcccac gcgctcacct ccacggcccc ctacactcgc taccacccca tggattacta      1020
     ctggtggctg cgcatgcaga tcatgacgca catgcctgca gccatttcag accggctcta      1080
     tgtctattga ggcctcacac tcctaggcta ccccaggggg gggggggggg attttgtttt      1140
     aaggagagca ttgtacacaa ttccaatttt tttaattttt tctaacctca tttcagagta      1200
     ctgtagctct aaagggttca tttaaacacc tgacataacc taaagggcag taacttgcaa      1260
     gggatgcttc ataggcagga atgtattatg tttgcaggga cattgtttct ttgctattta      1320
     tttcatgtga tcttgttatt tccacctcga atgccgagat aaaatcatta gtgaaatatc      1380
     aatttgctct gaaatggtac cagaataatt tctgctgttg atcatccaca atcttcagaa      1440
     ttcctgctta agacgcagcc ttcacaccat atagcagagg ccctccatgc tgtagtggca      1500
     aacctctgcc tcctgatgac tgggagcgtc caacaggctt tcccaggcct ggtcacagta      1560
     gcccaaagca aagcagaggc ttctttaatt tggggatcag aactcaaaac acagtgttga      1620
     aaccaagcaa ctgaccatat ccctttttct cgtagaattg taccaataat tactagggaa      1680
     aggaaccagc ctgcttttct tgcatgcttt cttgcaaagg aaggaaggag ctcagtggta      1740
     gagggactcc gtttggcaga cccctcccac agaagtttct taatcatatg agcattccca      1800
     tgagcgtgag gagctttatt gacaggactg cagtcatcag gattggccca tagtaacatt      1860
     tctcttctct tcaacagtag ttgaacatca actccagact tcatttggag tagagtttca      1920
     ctccatctcc tgtagtttga gagggtcacc gttgatcaga gggaagcaaa gagggttata      1980
     gtagcattac tgaatgccat ttttgccaga gtgttcagtg tgttacagca tagcatttgt      2040
     gcagcacctt gcacagaagg gccttaaccc tctccggggt ctgtaggcac gatcccagtg      2100
     caggtgctgc tcatagtact aacttgattg aaggattcac cgagccgaag tacctctagc      2160
     aggatataaa tctaacaaac cgtccataac attagaaagg taacttttag agcagtttca      2220
     tttccatggt ggttatgttt acatttgttt tgtactgaaa ggaaaggatg ggagaaagaa      2280
     aaagccacaa aagagccttt catggggaag tgcggaaaga gttaatttgt ttaagctcaa      2340
     aaggcaaaaa acaaagtaat taagataact gttgttagca agttgaagag aagggatctc      2400
     atgtgctccg gtgacagacc atgacatgac tgaactcctt tggcttaata aatgtgtaca      2460
     tggatggtaa caaaaaaaaa aaaaaaa                                          2487
//


  
spacer
spacer