spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ720179; SV 1; linear; mRNA; STD; VRT; 1703 BP.
XX
AC   AJ720179;
XX
DT   30-SEP-2004 (Rel. 81, Created)
DT   12-JAN-2005 (Rel. 82, Last updated, Version 2)
XX
DE   Gallus gallus mRNA for hypothetical protein, clone 12b8
XX
KW   ORF1.
XX
OS   Gallus gallus (chicken)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves;
OC   Neognathae; Galliformes; Phasianidae; Phasianinae; Gallus.
XX
RN   [1]
RP   1-1703
RA   Caldwell R.B.;
RT   ;
RL   Submitted (20-MAY-2004) to the EMBL/GenBank/DDBJ databases.
RL   Caldwell R.B., GSF - Forschungszentrum, Institut fuer Molekulare
RL   Strahlenbiologie, Ingolstaedter Landstr. 1, D-85764 Neuherberg, GERMANY.
XX
RN   [2]
RX   DOI; 10.1186/gb-2004-6-1-r6
RX   PUBMED; 15642098.
RA   Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA   Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA   Hayashizaki Y., Buerstedde J.M.;
RT   "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT   function analysis";
RL   Genome Biol. 6(1):R6-R6(2005).
XX
DR   Ensembl-Gn; ENSGALG00000013480; Gallus_gallus.
DR   Ensembl-Tr; ENSGALT00000021965; Gallus_gallus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1703
FT                   /organism="Gallus gallus"
FT                   /strain="CB"
FT                   /mol_type="mRNA"
FT                   /dev_stage="2 weeks old"
FT                   /clone_lib="riken1"
FT                   /clone="12b8"
FT                   /cell_type="lymphocyte"
FT                   /tissue_type="bursa"
FT                   /db_xref="taxon:9031"
FT   5'UTR           <1..46
FT                   /locus_tag="RCJMB04_12b8"
FT   CDS             47..1060
FT                   /locus_tag="RCJMB04_12b8"
FT                   /product="hypothetical protein"
FT                   /note="ORF1"
FT                   /db_xref="GOA:Q5ZKA5"
FT                   /db_xref="InterPro:IPR000672"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5ZKA5"
FT                   /protein_id="CAG31838.1"
FT                   /translation="MATALCPLRALGQTAFRPRTRRLHLSAPRADAVVISGRKLARQIR
FT                   QEARHEVEQWVAAGNKRPHLSVVLVGENPASHSYVLNKTKAAADVGISSETILKPASIT
FT                   EEELLDLISKLNNDANVDGLLVQLPLPEHIDERKICNAVTPDKDVDGFHVINVGRMCLD
FT                   QYSMLPATPWGVWEIIKRTGIPTLGKNVVVAGRSKNVGMPIAMLLHTDGRHERPGGDAT
FT                   VTISHRYTPKEQLKQHTIRADIVVAAAGIPNLITADMIKEGAAVIDVGITRVQDPITAK
FT                   SRLVGDVDFEGVKKKASYITPVPGGVGPMTVAMLMKNTIIAAKKLLKPKALEALTA"
FT   3'UTR           1061..>1703
FT                   /locus_tag="RCJMB04_12b8"
XX
SQ   Sequence 1703 BP; 417 A; 407 C; 473 G; 406 T; 0 other;
     ctgattgctc tcgcgtgttc tccgttttgc tcgtcccgct gctgccatgg caaccgcgct        60
     ctgcccgctc cgcgccctcg gccagaccgc tttccggccc cgcacccgcc gcctgcacct       120
     cagcgcaccc agagctgatg cggttgtgat ttctggaagg aagctggccc ggcagatcag       180
     acaagaagcc cgccatgaag ttgaacagtg ggtagcagct gggaacaaga gacctcacct       240
     cagcgtggtt ctggttggtg aaaatcctgc aagtcactcc tatgtgctga acaaaaccaa       300
     ggcggctgct gatgtgggaa tcagcagtga gacaatcctc aagccagctt caattactga       360
     ggaggagctg ctggatttga tcagcaaact aaataacgat gccaacgtgg atggcctgtt       420
     agtgcagctt cccttaccag aacacattga cgagcggaag atttgcaatg ctgtgactcc       480
     agacaaagat gttgatggct ttcatgtgat aaacgtgggg cgcatgtgcc ttgaccagta       540
     ctccatgctg ccagccaccc cgtggggggt gtgggagatc ataaagagaa cgggcatccc       600
     aacgctgggg aagaacgtgg tggtggccgg ccggtcgaag aatgtgggga tgcccattgc       660
     catgctgctg cacacagatg gcaggcacga gcgtccagga ggtgatgcca cggtaaccat       720
     atcacaccgc tatactccca aggagcagct gaaacaacac acgatccgtg ctgacatcgt       780
     ggtagcagca gcaggtattc ctaatctgat cacagctgat atgatcaaag aaggagctgc       840
     agttatcgat gtggggataa ctagagtgca ggatcctatc actgccaaat caaggctggt       900
     tggggatgtg gattttgaag gggtgaagaa gaaagccagt tacatcactc cggtccctgg       960
     gggagttggg cccatgacag ttgccatgct gatgaagaac accatcattg ctgccaagaa      1020
     gctgttgaaa cccaaagcgc tggaagcctt aactgcttaa cacaggactc tctttctagc      1080
     tctgacaaca acattccaag atgactccta gacaggccga tagaaaatgc aatattttat      1140
     ttattgtaca gaggtggtat ttactagtct gaggtcatag atatttattg ggagctgaag      1200
     cagatgctta tgagctgtaa taaggcatat gcatctacac tcctggcctt ctagcacagc      1260
     tgctttttaa gccagcactt ctctaaagga gccagccttg caggctgtgt tgttgcaggg      1320
     actgagcagc agtgggggcc ctctgggtgt gctgcagcat cagcattagc agtcctgggg      1380
     ggagcagagt ggagtagcag agtgtgctcc atggtgcaaa cagaatggcc ttcgtggttt      1440
     tgttctcaca aatgctcagt cagcccagac tgtgctctga agtgtttcac tctgtgatgg      1500
     gtgttttgtt ggggttgagc tcttctgtag aagcagcgac tggaaaaaag ccacgctctc      1560
     agcctggatg gggctctgtg cagtggcaga tctttggtac acattcatag gtgcagctaa      1620
     gctttttttt ttttgtgggg gtttttttcc ctctgttgga gggggacttt taaaaccttt      1680
     cctccaacaa aaaaaaaaaa aaa                                              1703
//
spacer
spacer