EBI Dbfetch

ID   AJ720171; SV 1; linear; mRNA; STD; VRT; 1947 BP.
XX
AC   AJ720171;
XX
DT   30-SEP-2004 (Rel. 81, Created)
DT   12-JAN-2005 (Rel. 82, Last updated, Version 2)
XX
DE   Gallus gallus mRNA for hypothetical protein, clone 11p1
XX
KW   ORF1.
XX
OS   Gallus gallus (chicken)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves;
OC   Neognathae; Galliformes; Phasianidae; Phasianinae; Gallus.
XX
RN   [1]
RP   1-1947
RA   Caldwell R.B.;
RT   ;
RL   Submitted (20-MAY-2004) to the EMBL/GenBank/DDBJ databases.
RL   Caldwell R.B., GSF - Forschungszentrum, Institut fuer Molekulare
RL   Strahlenbiologie, Ingolstaedter Landstr. 1, D-85764 Neuherberg, GERMANY.
XX
RN   [2]
RX   DOI; 10.1186/gb-2004-6-1-r6
RX   PUBMED; 15642098.
RA   Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA   Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA   Hayashizaki Y., Buerstedde J.M.;
RT   "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT   function analysis";
RL   Genome Biol. 6(1):R6-R6(2005).
XX
DR   Ensembl-Gn; ENSGALG00000000692; Gallus_gallus.
DR   Ensembl-Gn; ENSGALG00000001313; Gallus_gallus.
DR   Ensembl-Gn; ENSGALG00000001884; Gallus_gallus.
DR   Ensembl-Gn; ENSGALG00000013015; Gallus_gallus.
DR   Ensembl-Tr; ENSGALT00000000975; Gallus_gallus.
DR   Ensembl-Tr; ENSGALT00000001998; Gallus_gallus.
DR   Ensembl-Tr; ENSGALT00000001999; Gallus_gallus.
DR   Ensembl-Tr; ENSGALT00000002919; Gallus_gallus.
DR   Ensembl-Tr; ENSGALT00000021252; Gallus_gallus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1947
FT                   /organism="Gallus gallus"
FT                   /strain="CB"
FT                   /mol_type="mRNA"
FT                   /dev_stage="2 weeks old"
FT                   /clone_lib="riken1"
FT                   /clone="11p1"
FT                   /cell_type="lymphocyte"
FT                   /tissue_type="bursa"
FT                   /db_xref="taxon:9031"
FT   5'UTR           <1..31
FT                   /locus_tag="RCJMB04_11p1"
FT   CDS             32..1450
FT                   /locus_tag="RCJMB04_11p1"
FT                   /product="hypothetical protein"
FT                   /note="ORF1"
FT                   /db_xref="GOA:Q5ZKB3"
FT                   /db_xref="InterPro:IPR007006"
FT                   /db_xref="InterPro:IPR016900"
FT                   /db_xref="UniProtKB/TrEMBL:Q5ZKB3"
FT                   /protein_id="CAG31830.1"
FT                   /translation="MEGVEAYGFSAAMSGAFLLSSLLFAAVNRRLREPYMDEIFHVPQA
FT                   QAYCQGRFLQWDPMITTPPGLYLLSVGVVKPAAWLFGWTGTVVCSTGMLRFINLLISAG
FT                   NFYLLYLLLLKIHQKNKAVSGFQRILSSLTLATFPTLYFFTFLYYTDTGSVFFTLFAYL
FT                   MCLYGNHKASALLGFCAFMFRQTNIVWTVFCAGNVVAEKLNEAWKTELLKKKDERISSM
FT                   RTSFSDLTLIMRFLIEYLTSPKNLITLIALTWPYIVLATAFFVFVFINGGIVVGDRSSH
FT                   EACLHFPQLFYFLSFTLFFSFPHFLTPTKIRKFLQSLRRHRVQYILITAISLFLIWKFT
FT                   YVHKYLLADNRHYTFYVWRKIFQRHELVKYVLVPAYIFAGWSFVDTIKSKSIFWILMYF
FT                   VCLLSVTVPQKLLEFRYFILPFLIYRLNIPFAPVYRQLVELAFYVVVNVVTFYLFLNKT
FT                   FQWPNSVEIQRFMW"
FT   3'UTR           1451..>1947
FT                   /locus_tag="RCJMB04_11p1"
XX
SQ   Sequence 1947 BP; 494 A; 424 C; 393 G; 636 T; 0 other;
     cccggacgcg cggccgcttc ccggcggcag catggagggg gttgaggcgt acggcttttc        60
     ggccgccatg agcggcgcct tcctcctctc gtcgctgctc ttcgccgccg tgaaccggcg       120
     cctgcgggag ccctacatgg acgagatctt ccacgtcccg caggcgcagg cctactgcca       180
     gggccgcttc ctgcagtggg atcccatgat caccaccccc ccgggtctgt acctgctgtc       240
     agttggcgtg gtgaagccgg cagcctggct ctttggctgg acgggcactg tggtgtgttc       300
     caccggcatg ctcaggttca tcaacctcct catcagcgcc ggcaacttct acctgctgta       360
     cctgcttctg ctgaagatcc atcagaaaaa taaggctgtg tcaggtttcc agagaatctt       420
     gtcttcgtta actcttgcaa catttcccac cctttatttt tttacattcc tttattacac       480
     ggacacagga tcagtatttt ttactctctt tgcatattta atgtgccttt atggtaacca       540
     taaagcttca gctctgcttg gattttgtgc attcatgttt cgtcagacga atatcgtgtg       600
     gacagttttt tgtgctggaa atgtcgttgc agaaaagcta aatgaagcct ggaagacaga       660
     gttactgaaa aagaaagatg aaaggatctc ttccatgaga acatcgtttt ctgatctgac       720
     cttaatcatg cgatttctta ttgaatatct cacatcgcct aaaaacttaa ttacacttat       780
     tgctttaaca tggccataca ttgtgttagc aactgcgttc tttgtttttg tcttcatcaa       840
     tggtggaata gttgttggtg acagaagtag ccatgaagcc tgcttgcact ttccccagct       900
     gttctatttt ttgtccttta ctctcttttt ttccttccct catttcctga cccctactaa       960
     aatcaggaaa ttcctgcagt cattgcgaag gcaccgtgta cagtacatcc taatcactgc      1020
     catctctttg ttcttgattt ggaagtttac ctacgttcat aagtatttgc tagcagataa      1080
     tagacattac acgttctatg tctggagaaa aatcttccaa agacatgagc ttgtaaaata      1140
     tgtgttagtt ccagcctata tatttgctgg ctggagtttt gttgatacaa taaaatcaaa      1200
     atcaatattc tggatcttaa tgtattttgt atgtttatta tcagtcacag ttccccaaaa      1260
     gctgttagag ttccgttact ttattttgcc attcttaata tacaggctca atattccatt      1320
     tgcacctgtt tatagacaac ttgttgagtt ggctttttac gttgttgtga atgtagtaac      1380
     gttttatctt ttcctaaaca aaacattcca gtggccaaat agtgtagaaa tccagaggtt      1440
     tatgtggtga cttttttata accttcatac ccttatgaaa agccagttct gtctcagaac      1500
     cgtggactct ggaacaaagt accatgtttt gtattatata tggactattt ttttttccca      1560
     gaggactgga gaaggaagga agttgcttat gttcttggaa ctgaatgtga tacgttataa      1620
     tgtgcagata ttgaatttct gaactcctgg cgtgaacaaa atttggtagg agctgaaatt      1680
     tgggaacact taccagtaat taatgtgaaa catgggagat gtttacagtc attcttcatt      1740
     ataatatatt atctaatgtc cttccagata tgatacttga tgtttcagag gtttgtcttt      1800
     aaaacagcat gtctaagtgt tacattggga tgcatatttc ctctttggaa caggtcgctt      1860
     ccatctaaag gtcaaggtat gaagcactgc tcaacaataa tgttttcaaa tacacctaca      1920
     tcctacaacc caaaaaaaaa aaaaaaa                                          1947
//