EBI Dbfetch

ID   AJ719573; SV 1; linear; mRNA; STD; VRT; 2033 BP.
XX
AC   AJ719573;
XX
DT   30-SEP-2004 (Rel. 81, Created)
DT   12-JAN-2005 (Rel. 82, Last updated, Version 2)
XX
DE   Gallus gallus mRNA for hypothetical protein, clone 3h11
XX
KW   ORF1.
XX
OS   Gallus gallus (chicken)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves;
OC   Neognathae; Galliformes; Phasianidae; Phasianinae; Gallus.
XX
RN   [1]
RP   1-2033
RA   Caldwell R.B.;
RT   ;
RL   Submitted (20-MAY-2004) to the EMBL/GenBank/DDBJ databases.
RL   Caldwell R.B., GSF - Forschungszentrum, Institut fuer Molekulare
RL   Strahlenbiologie, Ingolstaedter Landstr. 1, D-85764 Neuherberg, GERMANY.
XX
RN   [2]
RX   DOI; 10.1186/gb-2004-6-1-r6
RX   PUBMED; 15642098.
RA   Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA   Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA   Hayashizaki Y., Buerstedde J.M.;
RT   "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT   function analysis";
RL   Genome Biol. 6(1):R6-R6(2005).
XX
DR   Ensembl-Gn; ENSGALG00000002349; Gallus_gallus.
DR   Ensembl-Tr; ENSGALT00000002866; Gallus_gallus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2033
FT                   /organism="Gallus gallus"
FT                   /strain="CB"
FT                   /mol_type="mRNA"
FT                   /dev_stage="2 weeks old"
FT                   /clone_lib="riken1"
FT                   /clone="3h11"
FT                   /cell_type="lymphocyte"
FT                   /tissue_type="bursa"
FT                   /db_xref="taxon:9031"
FT   5'UTR           <1..3
FT                   /locus_tag="RCJMB04_3h11"
FT   CDS             4..1989
FT                   /locus_tag="RCJMB04_3h11"
FT                   /product="hypothetical protein"
FT                   /note="ORF1"
FT                   /db_xref="GOA:Q5ZM11"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5ZM11"
FT                   /protein_id="CAG31232.1"
FT                   /translation="MEARVAEAAARLARQENEIKSLTAEIEHLKNFGCLGISPSLEGLR
FT                   DENAKLKYRLNFLQKSLQEEQSKTVKSMININSRLQEIFGAAIQAAYPELENPPLVVTP
FT                   SQQPKFGDYQCNSAMGITQILLKTKEQKVSPREIAEKITKHIPANECIEKVEIAGPGFI
FT                   NVHLRKDFVSKQLSSLLVNGVQPPAIGKRKKVILDFSSPNIAKEMHVGHLRSTIIGESM
FT                   CRLFEFAGYDVLRLNHLGDWGTQFGMLIAHLQDRFPDYLTVSPPIGDLQAFYKESKRRF
FT                   DTEEEFKKRAYQCVVLLQSKDPDFIKAWELICDVSRKEFQKIYNCLDVTLTERGESFYQ
FT                   DMMKDIVKEFEDKGFVQVDDGRKIVFVPGFSVPLTIMKSDGGYTYDTSDLAALRHRLLE
FT                   EKGDILIYVVDSGQSVHLQTVFAAGQMIGWYDPKVTRITHAAFGVVLGEDKKKFKTRSG
FT                   DTVRLMDLLEEGLKRAMDKLKDKERDKVLTPEELKAAQMSVAFGCIKYADLSHNRLNDY
FT                   VFSFDKMLDDRGNTAAYLLYAFTRIRAIARLANIDEGMLRKAAREEVIVLDHEKEWKLG
FT                   KCILRFPEILQKILDDLLLHTLCDYLYELATTFTEFYDNCYCVEKDRQSGQIMKVNTWR
FT                   LLLCEATATIMAKGFDILGIKPVERM"
FT   3'UTR           1990..>2033
FT                   /locus_tag="RCJMB04_3h11"
XX
SQ   Sequence 2033 BP; 586 A; 425 C; 556 G; 466 T; 0 other;
     aggatggagg cacgcgtggc ggaggcggcg gcccggctgg cacggcagga aaacgagatt        60
     aagtcgctaa ctgcagaaat tgagcatctg aagaactttg ggtgcctggg aatctcccca       120
     agtttggaag ggttgcgaga cgaaaacgct aaactgaagt atcggttgaa tttccttcag       180
     aagagccttc aagaggaaca aagtaaaaca gtgaaaagca tgattaatat caacagccgt       240
     cttcaggaga tctttggagc tgccattcag gctgcctacc cggagttaga aaaccctcca       300
     ctagtggtga caccgagcca gcagcccaaa tttggggatt atcagtgcaa cagcgccatg       360
     ggcataacac agatactgct caaaaccaag gaacagaagg ttagtccaag ggagatcgct       420
     gagaaaataa ccaaacatat tcctgcaaac gaatgcattg agaaggttga aattgctggt       480
     cctggtttta tcaacgtcca tctgcggaag gattttgtat caaagcagct gagcagttta       540
     ttagtgaatg gagttcaacc accggctatt ggcaaaagga aaaaggtgat actggatttc       600
     tcctccccca acattgcaaa ggagatgcat gttggtcacc tgcggtccac catcattgga       660
     gaaagtatgt gccgcctctt cgagtttgca ggttatgatg tgttgaggtt aaaccattta       720
     ggagactggg gcacccagtt tggaatgctc attgctcacc tgcaagacag atttccagat       780
     tacttaactg tttctcctcc cattggggat ctccaagctt tttacaagga atccaagagg       840
     agatttgaca ctgaggagga atttaagaag cgagcctacc aatgtgtggt gctgctgcag       900
     agcaaagacc ccgacttcat taaggcatgg gagctgatct gcgatgtgtc gcggaaagag       960
     ttccagaaaa tctacaactg cctggacgtc acactgacag agagagggga gtcattctac      1020
     caagatatga tgaaagatat cgtgaaagaa tttgaagata aaggctttgt ccaggtggat      1080
     gatggccgga agattgtctt tgtcccgggt ttctctgtcc cactgacaat catgaagtca      1140
     gatggaggtt acacatatga cacatctgac ttggctgcac taagacacag gctgcttgaa      1200
     gagaagggtg atatccttat ctatgttgtc gacagtggcc agtcggtgca tttgcaaaca      1260
     gtgtttgcag ctggacagat gatcggctgg tatgacccca aagtaaccag aatcacccac      1320
     gctgcatttg gagtggtgct gggagaagac aagaagaagt tcaaaactcg gtcaggggac      1380
     acagtgcgtc tcatggatct tctggaagaa gggctgaaac gggccatgga caagctgaaa      1440
     gacaaggaac gggacaaggt cctcacgcca gaagagctga aagcggccca gatgtcagtt      1500
     gcttttggat gcattaaata tgcagacctc tcccacaaca gactaaatga ctacgtattc      1560
     tcctttgaca agatgctgga tgaccgagga aatacagctg cttatttgct gtatgccttc      1620
     acgcggatca gggctattgc tcgtctggcc aatattgatg aggggatgct gcggaaggca      1680
     gcgagggagg aggtgattgt ccttgaccat gagaaggagt ggaaactggg caagtgtatc      1740
     ctgaggttcc ctgagattct gcagaagatc ctggatgatc tgttactgca cacactctgt      1800
     gactaccttt atgagctggc caccaccttc actgagttct atgacaattg ctattgtgtg      1860
     gagaaggaca ggcagagtgg ccagatcatg aaggtgaaca catggagact gctgctgtgc      1920
     gaggccactg ccaccatcat ggccaagggt tttgacatcc tgggaattaa gcctgtggag      1980
     aggatgtaac ggtggggtga caataaaagg actgactgac aaaaaaaaaa aaa             2033
//