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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ627628; SV 1; linear; mRNA; STD; VRT; 1554 BP.
XX
AC   AJ627628;
XX
DT   17-FEB-2004 (Rel. 78, Created)
DT   11-JUL-2005 (Rel. 84, Last updated, Version 2)
XX
DE   Xenopus tropicalis partial mRNA for beta-galactosamide
DE   alpha-2,6-sialyltransferase II
XX
KW   beta-galactosamide alpha-2,6-sialyltranferase II; st6Gal II.
XX
OS   Xenopus (Silurana) tropicalis (western clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Silurana.
XX
RN   [1]
RP   1-1554
RA   Harduin-Lepers A.;
RT   ;
RL   Submitted (13-FEB-2004) to the EMBL/GenBank/DDBJ databases.
RL   Harduin-Lepers A., Universite de Lille 1, UGSF, UMR CNRS USTL no8576,
RL   Villeneuve d'Ascq, 59655, FRANCE.
XX
RN   [2]
RX   DOI; 10.1093/glycob/cwi063
RX   PUBMED; 15843597.
RA   Harduin-Lepers A., Mollicone R., Delannoy P., Oriol R.;
RT   "The animal sialyltransferases and sialyltransferase-related genes: a
RT   phylogenetic approach";
RL   Glycobiology 15(8):805-817(2005).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1554
FT                   /organism="Xenopus (Silurana) tropicalis"
FT                   /strain="Wistar"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:8364"
FT   CDS             <1..>1551
FT                   /codon_start=1
FT                   /product="beta-galactosamide alpha-2,6-sialyltransferase
FT                   II"
FT                   /function="transfers sialic acid residue in alpha 2,6
FT                   linkage to galactose residues"
FT                   /note="ST6Gal II"
FT                   /db_xref="GOA:Q701R1"
FT                   /db_xref="InterPro:IPR001675"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q701R1"
FT                   /protein_id="CAF29496.1"
FT                   /translation="MKPNLKQWKQFMLFGICAWGLLFLVIFVYFTDSNSVEPVPSAFSY
FT                   VESKKHFPLQGKQRAIMGAHQDQLFSYAIDDQDLLKEGILDSFIVGPGSMKKMAGADNY
FT                   FESEQEFIMSKKTQKSTSNNHEDDDDEIYLHKNIDSVSGKKAPAYGKRYYHDTQRQHKK
FT                   IRRNMQRKKQHMIEDSYDWNGFSSSMSKSFLQKLWKGNVSSKMLTPRLQKARREYLRAN
FT                   KLGVNFNGKQNSRKLNPQELLCVLKDRAQVKTLDGKDAPFSSLGWEKYFPKIALNKLYP
FT                   HGFSTCAVVSSAGAILNSSLGAEIDSHDAVLRFNSAPTRNYEKDVGNKTTLRIINSQIL
FT                   TNPNHHFTDSSLYKDVTLIAWDPSPYYADLHMWYHKPDYNLFPPYEKHRKRNPDQPFYI
FT                   LHPKFTWELWKIIQENSNEKIQPNPPSSGFIGILIMMSMCRTVHVYEYIPSYRQTDLCH
FT                   YHEQYYDAACTLGAYHPLLYEKMLIQRINQGTEDNLLRKGKVILPGFSSIHCPIKDHIT
FT                   "
XX
SQ   Sequence 1554 BP; 522 A; 323 C; 294 G; 415 T; 0 other;
     atgaaaccaa acttgaagca atggaaacaa ttcatgctat ttggtatctg tgcatggggt        60
     ctcctgttcc tcgtaatctt tgtctacttt acggacagca attctgtaga accagtacca       120
     agcgctttct cttatgtcga gtctaaaaaa cattttccgc tacagggtaa acagcgggcc       180
     ataatgggag cacatcaaga tcagttattc tcttatgcaa ttgatgacca agatttactt       240
     aaagaaggca ttttagattc ctttattgtg ggcccaggta gtatgaaaaa gatggctggt       300
     gcagacaatt attttgaaag tgaacaagaa tttattatgt caaaaaaaac acaaaagtcc       360
     acttcgaata atcatgaaga tgatgatgat gaaatctatt tgcataaaaa tattgattca       420
     gtttctggaa aaaaggcccc ggcatatggt aaaagatatt atcatgacac acaaagacag       480
     cacaaaaaaa tcagaaggaa tatgcaacgc aagaaacagc atatgattga agactcttat       540
     gactggaatg gattttcttc gtcaatgtcc aaatcttttc tgcagaaact gtggaagggc       600
     aatgtctcat cgaaaatgtt gactccacgt ctacagaaag ccagacgaga gtatctcaga       660
     gctaataaac ttggcgttaa cttcaatggt aaacaaaact ccaggaaact gaatccgcaa       720
     gaacttcttt gtgttctcaa ggatcgtgcc caagttaaaa ctttagatgg aaaggatgct       780
     ccattctcca gtcttggatg ggaaaagtat ttccccaaga tagctttgaa taaattatat       840
     ccacatggct tctcaacctg tgctgtagtt tcatcagctg gagcaatatt gaactcctcc       900
     cttggggcag agattgattc gcatgatgca gtgctgagat ttaattctgc accaacacgg       960
     aactatgaaa aagatgttgg aaacaagaca acgttgcgaa ttataaactc tcagattctt      1020
     accaatccga accaccattt taccgacagc tcattgtata aagatgtcac tttaatcgct      1080
     tgggacccat ctccgtatta tgcagatctt cacatgtggt accacaaacc agactacaac      1140
     ctattcccgc catatgagaa acatcgtaaa aggaacccag accagccctt ttatattctt      1200
     cacccaaaat tcacatggga gctgtggaag ataattcagg agaacagcaa tgagaaaata      1260
     cagcccaacc ctccctcatc tggattcatt ggtatcctca tcatgatgtc aatgtgccgg      1320
     acggtgcacg tgtacgaata tattccttcc tataggcaaa cagacctgtg tcactatcat      1380
     gaacaatatt atgatgcagc atgtacactg ggagcctacc accctttact gtatgaaaaa      1440
     atgctcatcc aaaggattaa tcaagggaca gaagacaatc ttctaagaaa agggaaagta      1500
     atcttgccag gattcagctc tatacattgc ccaataaagg atcacattac ataa            1554
//
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