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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ627627; SV 1; linear; mRNA; STD; VRT; 1545 BP.
XX
AC   AJ627627;
XX
DT   17-FEB-2004 (Rel. 78, Created)
DT   21-OCT-2008 (Rel. 97, Last updated, Version 3)
XX
DE   Danio rerio partial mRNA for beta-galactosamide alpha-2,6-sialyltransferase
DE   II
XX
KW   beta-galactosamide alpha-2,6-sialyltranferase II; st6Gal II.
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
XX
RN   [1]
RP   1-1545
RA   Harduin-Lepers A.;
RT   ;
RL   Submitted (13-FEB-2004) to the EMBL/GenBank/DDBJ databases.
RL   Harduin-Lepers A., Universite de Lille 1, UGSF, UMR CNRS USTL no8576,
RL   Villeneuve d'Ascq, 59655, FRANCE.
XX
RN   [2]
RX   DOI; 10.1093/glycob/cwi063
RX   PUBMED; 15843597.
RA   Harduin-Lepers A., Mollicone R., Delannoy P., Oriol R.;
RT   "The animal sialyltransferases and sialyltransferase-related genes: a
RT   phylogenetic approach";
RL   Glycobiology 15(8):805-817(2005).
XX
DR   Ensembl-Gn; ENSDARG00000039335; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000009560; Danio_rerio.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1545
FT                   /organism="Danio rerio"
FT                   /strain="Wistar"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7955"
FT   CDS             <1..>1542
FT                   /codon_start=1
FT                   /product="beta-galactosamide alpha-2,6-sialyltransferase
FT                   II"
FT                   /function="transfers sialic acid residue in alpha 2,6
FT                   linkage to galactose residues"
FT                   /note="ST6Gal II"
FT                   /db_xref="GOA:Q701R2"
FT                   /db_xref="InterPro:IPR001675"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q701R2"
FT                   /db_xref="ZFIN:ZDB-GENE-060322-4"
FT                   /protein_id="CAF29495.1"
FT                   /translation="MKSSLKQWRRLALGLILVWALLFLALLSYFMESRVDDPHAAAALS
FT                   YTDTRRLTSLQGNPRTIMATHLGLATSSAPSTSSNTQQEQSQEENPSADPQPSPLSQEA
FT                   YPYPDPQSLAAWSAFGTQDVGSRSTGVSRNRERQEYNQDSPQEDEDEEEEVIGGEEEDE
FT                   EGGDEGRGRTTKRVARHGSSDPHEYYVPRYKSIVHGLWKGSLSMGMLSPRLQRAMKDYL
FT                   NNNKHGVAYRGHRKAKQSRQQVLCELKKREKIRTLDGAEMPFSKLGWQKIVPALPLSQI
FT                   HRPGLKTCAVVTSAGAMLHSGLGKEIDSHDAVLRFNTAPTVGYERDVGNKTTIRIINSQ
FT                   ILANPMHRFNRSSLYKNVTLVAWDPAPYTLNLHQWYSNPDYNLFTPYMEYRMRFPSQPF
FT                   YILHPKYIWQLWDVIQANNLENIQPNPPSSGFIGILLMMSLCEEVHVYEYIPSLRQTDL
FT                   CHYHERYYDAACTLGAYHPLLYEKMLIQRMNIGSEDELKRKGKVTLPGFNKVHCEP"
XX
SQ   Sequence 1545 BP; 392 A; 437 C; 408 G; 308 T; 0 other;
     atgaagtcca gtctgaaaca gtggcggcgg ctcgccctcg gcctcattct ggtctgggca        60
     ctgctcttcc tggcgctcct ctcttacttc atggagtcaa gagtggatga cccgcacgcc       120
     gcggccgctc tatcttacac agacacccga cgcctgacct ccctgcaggg caaccctcgg       180
     accatcatgg ccacccattt gggcctggcc acctcatcag ccccatccac ctccagcaac       240
     acccagcagg agcagagcca ggaggaaaac ccaagcgccg acccccaacc tagtccactc       300
     agccaggaag cctaccctta ccctgaccct cagagcctgg cagcctggtc cgcattcggc       360
     acccaggatg tgggctcgag gtcgaccggc gtgagtcgca accgtgaacg acaagagtac       420
     aaccaggatt cacctcaaga agacgaggat gaagaggagg aggtgattgg gggggaagag       480
     gaggatgagg agggtggtga tgaaggtaga gggaggacca caaaacgggt tgcaaggcat       540
     gggagctctg acccgcatga atattacgtt cccagataca aatccatagt tcatggtctg       600
     tggaaaggga gtttgtcgat ggggatgctc agtccacgcc tgcagagggc tatgaaagac       660
     tacctgaata ataataagca tggagtggcc tacagggggc accggaaggc gaagcagagc       720
     cgccagcagg tgctgtgtga gctgaaaaaa agggagaaga ttcgaacatt ggatggggcc       780
     gagatgcctt tctccaaatt gggctggcag aagattgtgc ctgcattacc cctaagccag       840
     atccacaggc caggcttaaa gacctgtgct gtggtcacct ctgctggagc catgctgcac       900
     tctggacttg gcaaggagat tgactcccat gatgcagtgc tgcggtttaa tacagctcct       960
     actgtgggtt atgaaagaga cgttgggaat aaaaccacca tacgcatcat caactctcag      1020
     atcctggcga atcccatgca taggttcaac agaagctcat tgtataaaaa tgtaacgctg      1080
     gtggcgtggg accctgcacc gtacaccctc aacctgcacc agtggtactc caatccagac      1140
     tacaacctct tcacaccata catggagtac aggatgcgct tcccttctca gcctttctac      1200
     atcctgcacc ccaagtacat ctggcagtta tgggacgtga ttcaagctaa taatctggag      1260
     aacatccagc ccaatccacc ctcctcaggg ttcataggca tcctgctaat gatgtcctta      1320
     tgtgaagagg tgcatgtgta cgagtacatt ccctccctgc gtcagacgga cctgtgccat      1380
     tatcacgagc gctactacga tgccgcctgc actctgggtg cgtatcatcc tctgctctac      1440
     gagaagatgc tcatccagcg catgaacatc ggctcagagg atgagctcaa acgcaaaggc      1500
     aaagtcacac tgcccggatt caacaaagtc cactgtgagc cttga                      1545
//
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