spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ626815; SV 1; linear; mRNA; STD; INV; 1140 BP.
XX
AC   AJ626815;
XX
DT   05-FEB-2004 (Rel. 78, Created)
DT   11-JUL-2005 (Rel. 84, Last updated, Version 2)
XX
DE   Ciona intestinalis mRNA for alpha-2,3-sialyltransferase ST3Gal I (siat4
DE   gene)
XX
KW   alpha-2,3-sialyltransferase ST3Gal I; siat4 gene.
XX
OS   Ciona intestinalis
OC   Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona;
OC   Phlebobranchia; Cionidae; Ciona.
XX
RN   [1]
RP   1-1140
RA   Harduin-Lepers A.;
RT   ;
RL   Submitted (27-JAN-2004) to the EMBL/GenBank/DDBJ databases.
RL   Harduin-Lepers A., Universite de Lille 1, UGSF UMR CNRS USTL no8576,
RL   Villeneuve d'Ascq, 59655, FRANCE.
XX
RN   [2]
RX   DOI; 10.1093/glycob/cwi063
RX   PUBMED; 15843597.
RA   Harduin-Lepers A., Mollicone R., Delannoy P., Oriol R.;
RT   "The animal sialyltransferases and sialyltransferase-related genes: a
RT   phylogenetic approach";
RL   Glycobiology 15(8):805-817(2005).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1140
FT                   /organism="Ciona intestinalis"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7719"
FT   CDS             1..1140
FT                   /codon_start=1
FT                   /gene="siat4"
FT                   /product="alpha-2,3-sialyltransferase ST3Gal I"
FT                   /function="transfers sialic acid residues in alpha 2,3
FT                   linkage to galactose"
FT                   /note="belongs to the CAZy glycosyltransferase family 29,
FT                   encodes a type II transmembrane Golgi protein"
FT                   /db_xref="GOA:Q702S3"
FT                   /db_xref="InterPro:IPR012163"
FT                   /db_xref="UniProtKB/TrEMBL:Q702S3"
FT                   /protein_id="CAF25173.1"
FT                   /translation="MLINFKLSRVIAMLLVVAIFLTYSWLLLWSTKTALQTNRKNKAGQ
FT                   DEVPVINVIKEDSYVQQKTQNLNKGKRFDLGRVNHSHPREEIQQNNKCGHQLDASQTRW
FT                   FRARFNPEIEPVWTQSALEIDYLVYDWWLSLQSSEAENLDKTFEALYKEGVPRKDPFAR
FT                   LTHDREAGCRSCAVVGNSGNILNSNYGNVIDGHDFVIRMNKGPTYNYENDVGSKTTHRF
FT                   MYPTTAASSLPQGVSLVLVPFQPLDIKWLLSALTTGEITRTYQPLVRRVTCDKSKITII
FT                   SPTFIRYVHDRWTQHHGRYPSTGLLALIYALHECDEVDVYGFGANRAGNWHHYWEDLPP
FT                   HVAGAFRKTGVHDSAQENEIIDQLHIHGLLRVHRSEQSS"
XX
SQ   Sequence 1140 BP; 362 A; 225 C; 269 G; 284 T; 0 other;
     atgttaatca actttaaatt aagtcgtgtg attgctatgc tgctcgtagt agcaattttt        60
     ctaacctata gctggctctt gctatggtca acaaagactg cattacaaac aaaccggaaa       120
     aacaaagccg gccaagatga ggttccggtt ataaacgtga taaaggaaga tagttatgtg       180
     cagcagaaaa ctcaaaacct taataaagga aagaggtttg atttaggaag agtaaatcat       240
     tcgcatcctc gggaggagat acagcagaac aataaatgcg gacatcaact tgatgcttct       300
     caaacacggt ggtttagagc acggtttaac ccagaaattg aacctgtgtg gacacagagc       360
     gcactggaga ttgattactt ggtatatgac tggtggctat cgctgcagtc aagcgaagca       420
     gagaatctgg acaaaacgtt cgaagcattg tacaaagaag gcgtgccaag gaaagatcca       480
     tttgctagac taactcatga cagagaggct ggctgtagaa gttgtgctgt ggttggaaac       540
     tctggtaata tactcaactc aaactatgga aatgtgatag acggacatga ttttgtcatt       600
     cgtatgaaca aaggtcctac ctataactat gaaaatgatg tgggttcaaa aacaacacac       660
     agatttatgt atcctacaac tgctgcaagc tcactgcctc aaggagtcag tttggtactg       720
     gtgccatttc aaccactgga cattaaatgg cttctcagtg ctttaaccac aggagaaata       780
     acaaggacct accaaccgct ggttaggcga gttacatgcg acaaatcaaa gattaccatc       840
     attagtccta cattcatacg ctatgtacat gaccgatgga ctcagcacca tgggaggtat       900
     ccctccacag gattgttggc acttatatat gcactacacg agtgtgatga agttgatgtg       960
     tatggatttg gagctaacag agcggggaac tggcaccatt actgggagga cttgcccccc      1020
     catgtggcgg gggcttttcg taaaactggc gtccatgatt cagcgcaaga aaatgagatt      1080
     attgaccagt tacatataca tggactgcta agggtacaca ggtcggaaca atcgtcatag      1140
//
spacer
spacer