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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ626814; SV 1; linear; mRNA; STD; INV; 1125 BP.
XX
AC   AJ626814;
XX
DT   05-FEB-2004 (Rel. 78, Created)
DT   11-JUL-2005 (Rel. 84, Last updated, Version 2)
XX
DE   Ciona savignyi mRNA for alpha-2,3-sialyltransferase ST3Gal I (siat4 gene)
XX
KW   alpha-2,3-sialyltransferase ST3Gal I; siat4 gene.
XX
OS   Ciona savignyi
OC   Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona;
OC   Phlebobranchia; Cionidae; Ciona.
XX
RN   [1]
RP   1-1125
RA   Harduin-Lepers A.;
RT   ;
RL   Submitted (27-JAN-2004) to the EMBL/GenBank/DDBJ databases.
RL   Harduin-Lepers A., Universite de Lille 1, UGSF UMR CNRS USTL no8576,
RL   Villeneuve d'Ascq, 59655, FRANCE.
XX
RN   [2]
RX   DOI; 10.1093/glycob/cwi063
RX   PUBMED; 15843597.
RA   Harduin-Lepers A., Mollicone R., Delannoy P., Oriol R.;
RT   "The animal sialyltransferases and sialyltransferase-related genes: a
RT   phylogenetic approach";
RL   Glycobiology 15(8):805-817(2005).
XX
DR   Ensembl-Gn; ENSCSAVG00000006803; Ciona_savignyi.
DR   Ensembl-Tr; ENSCSAVT00000011732; Ciona_savignyi.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1125
FT                   /organism="Ciona savignyi"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:51511"
FT   CDS             1..1125
FT                   /codon_start=1
FT                   /gene="siat4"
FT                   /product="alpha-2,3-sialyltransferase ST3Gal I"
FT                   /function="transfers sialic acid residues in alpha 2,3
FT                   linkage to galactose"
FT                   /note="belongs to the CAZy glycosyltransferase family 29,
FT                   encodes a type II transmembrane Golgi protein"
FT                   /db_xref="GOA:Q702S4"
FT                   /db_xref="InterPro:IPR001675"
FT                   /db_xref="InterPro:IPR012163"
FT                   /db_xref="UniProtKB/TrEMBL:Q702S4"
FT                   /protein_id="CAF25172.1"
FT                   /translation="MLINFKTRRVVAMLLVVAIIITYSWLLIWSTRNALTQSPQNMSEK
FT                   KAPVINLVAGERKRPQQARVQGRRIDLGRSNYSHLHNETFPNKKCGRDLDASEKRWFKG
FT                   RFNPEIQPVWTESTLEIDYLVYDWWLSLQSSRGENLDKVFENLYKIGVPRNNPFARPNH
FT                   DNEAICRRCAVVGNSGNLINSKYGNIDSHDFVIRLNKGPTEGFENDVGRKTTHRFMYPA
FT                   TASSLAQDVSLVLLPFQPQDVKWLLSALTTGELTNTYQPVISRVTCDKSKIVIISPTFI
FT                   RYVHDRWTQHHGRYPSTGLIAIIYALHECDQVDLYGFGADSAGNWHHYWEDLPPHIAGA
FT                   FRQTGVHDSDKESSMINQLHIHRLLTLHVPGKDL"
XX
SQ   Sequence 1125 BP; 375 A; 218 C; 243 G; 289 T; 0 other;
     atgcttatta actttaaaac acgccgtgta gttgccatgc tgttggttgt tgctattatt        60
     ataacctaca gttggctttt gatatggtcc acaagaaatg cacttactca aagtccacaa       120
     aacatgtctg aaaagaaagc ccctgtaata aatttggtag caggagaacg aaaacgacca       180
     caacaagcaa gagttcaagg tagaagaatt gaccttggaa gatcgaacta ttcacattta       240
     cataatgaga catttccaaa caaaaaatgt ggacgagatc ttgatgcatc ggagaaacga       300
     tggtttaaag ggcggtttaa tccagaaatc caaccagtat ggacagaaag tacactggaa       360
     attgattatt tggtctatga ttggtggctc tcattacagt ctagtagagg ggagaatttg       420
     gacaaggttt ttgaaaattt gtacaagata ggtgtaccta ggaacaaccc atttgcacga       480
     ccaaatcatg acaacgaagc catatgcaga agatgtgctg tggtgggcaa ttcaggcaat       540
     ttgatcaact caaaatatgg aaacattgac tcacatgatt ttgttatacg ccttaacaaa       600
     ggaccaacag aaggatttga aaatgacgtg ggaaggaaaa ctactcacag gtttatgtat       660
     ccagctacag caagctcact ggctcaagat gtcagtttgg tgttgttacc ttttcaacca       720
     caagatgtga aatggctact gagtgcactg actacagggg agcttaccaa tacctatcaa       780
     ccagttataa gtcgagtaac ttgcgataaa tccaaaattg ttatcattag tccaacattt       840
     attaggtatg tccatgaccg gtggacacaa caccacggaa gatacccatc cactgggtta       900
     atcgccatca tatatgccct gcatgaatgt gaccaagtgg acttgtatgg gtttggagct       960
     gacagtgctg gaaactggca ccactattgg gaagacttac caccccatat agcaggggca      1020
     tttcgacaaa ctggtgtaca cgattcagac aaggaaagtt ctatgataaa ccaattacac      1080
     atacaccggt tgctgacact acatgtacca ggaaaggact tgtaa                      1125
//
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