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EBI DbfetchID AJ621749; SV 1; linear; mRNA; STD; MAM; 1638 BP. XX AC AJ621749; XX DT 22-JUL-2004 (Rel. 80, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 4) XX DE Pongo pygmaeus mRNA for succinic semialdehyde dehydrogenase precursor DE (aldh5a1 gene), isolate subject 1 XX KW aldh5a1 gene; ssadh gene; ssdh gene; KW succinic semialdehyde dehydrogenase precursor. XX OS Pongo pygmaeus (Bornean orangutan) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Pongo. XX RN [1] RP 1-1638 RA Malaspina P.; RT ; RL Submitted (22-JAN-2004) to the EMBL/GenBank/DDBJ databases. RL Malaspina P., Biology, Universita Tor Vergata, Via della Ricerca RL Scientifica, Rome, 00133, ITALY. XX RN [2] RX DOI; 10.1007/s00239-005-0154-8 RX PUBMED; 16786440. RA Blasi P., Palmerio F., Aiello A., Rocchi M., Malaspina P., Novelletto A.; RT "SSADH variation in primates: intra- and interspecific data on a gene with RT a potential role in human cognitive functions"; RL J. Mol. Evol. 63(1):54-68(2006). XX DR Ensembl-Gn; ENSPPYG00000016280; Pongo_pygmaeus. DR Ensembl-Tr; ENSPPYT00000018929; Pongo_pygmaeus. XX FH Key Location/Qualifiers FH FT source 1..1638 FT /organism="Pongo pygmaeus" FT /isolate="subject 1" FT /mol_type="mRNA" FT /db_xref="taxon:9600" FT CDS 1..1608 FT /gene="aldh5a1" FT /product="succinic semialdehyde dehydrogenase precursor" FT /function="GABA metabolism" FT /EC_number="1.2.1.24" FT /note="synonyms: ssdh, ssadh" FT /db_xref="GOA:Q6A2H2" FT /db_xref="InterPro:IPR010102" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016160" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/Swiss-Prot:Q6A2H2" FT /protein_id="CAF21866.1" FT /translation="MATCFWLRSCGAQRLGSTFPGCRLRPRAGGLVPASRPAPXPAQLR FT GYAGGLAGLSAALLRTDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRA FT AYEAFCSWREVSAKERSSLLRKWYXLMIXNKDDLARIITAESGKPLKEAHGEILYSAFF FT LEWFSEEARRVYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAG FT CTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKIS FT FTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTC FT VCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDA FT VSKGATIVTGGKRHQLGKNFFEPTLLXNVTQDMLCTHEETFGPLAPVIKFNTEEEAIAI FT ANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGS FT KYGIDEYLELKYVCYGGL" FT exon 1..354 FT /gene="aldh5a1" FT /number=1 FT sig_peptide 1..141 FT /gene="aldh5a1" FT mat_peptide 142..1605 FT /gene="aldh5a1" FT /product="succinic semialdehyde dehydrogenase" FT /EC_number="1.2.1.24" FT intron 354^355 FT /gene="aldh5a1" FT /number=1 FT exon 355..438 FT /gene="aldh5a1" FT /number=2 FT intron 438^439 FT /gene="aldh5a1" FT /number=2 FT exon 439..609 FT /gene="aldh5a1" FT /number=3 FT intron 609^610 FT /gene="aldh5a1" FT /number=3 FT exon 610..726 FT /gene="aldh5a1" FT /number=4 FT intron 726^727 FT /gene="aldh5a1" FT /number=4 FT exon 727..870 FT /gene="aldh5a1" FT /number=5 FT intron 870^871 FT /gene="aldh5a1" FT /number=5 FT exon 871..1014 FT /gene="aldh5a1" FT /number=6 FT intron 1014^1015 FT /gene="aldh5a1" FT /number=6 FT exon 1015..1173 FT /gene="aldh5a1" FT /number=7 FT intron 1173^1174 FT /gene="aldh5a1" FT /number=7 FT exon 1174..1343 FT /gene="aldh5a1" FT /number=8 FT intron 1343^1344 FT /gene="aldh5a1" FT /number=8 FT exon 1344..1402 FT /gene="aldh5a1" FT /number=9 FT intron 1402^1403 FT /gene="aldh5a1" FT /number=9 FT exon 1403..1608 FT /gene="aldh5a1" FT /number=10 FT 3'UTR 1609..1638 FT /gene="aldh5a1" XX SQ Sequence 1638 BP; 361 A; 427 C; 484 G; 359 T; 7 other; atggcgacct gcttttggct gcggagctgt ggggcccagc gcctcgggtc gacgtttcca 60 ggctgccgcc tccgcccccg cgccggsggc ctggtccctg cctcccggcc tgcgccckgc 120 ccggcccagc tccgcggcta cgctgggggc ctggcgggcc tctctgcggc gctgctgcgc 180 accgacagct tcgtgggcgg ccgctggctc ccrgccgccg ccaccttccc cgtgcaagac 240 ccggccagcg gcgccgctct gggcatggtg gccgactgcg gggtgcgaga ggcccgtgcc 300 gccgtgcgcg ctgcctacga ggctttctgc agctggaggg aggtctcggc caaggagagg 360 agttcattac ttcggaagtg gtacwattta atgatacwaa ataaggatga ccttgccaga 420 ataatcacag ctgaaagtgg aaagccactg aaggaggcac atggagaaat tctctattcc 480 gcctttttcc tagagtggtt ctctgaggaa gcccgccgtg tttacggaga cattatctac 540 accccggcaa aggacaggcg ggccctggtc ctcaagcagc ccataggtgt ggctgcagtc 600 atcaccccgt ggaatttccc cagtgccatg atcacccgga aggtgggggc ygccctggca 660 gccggctgta ccgtcgtggt gaagcctgcc gaagacacgc ccttctccgc cctggccctg 720 gctgagcttg caagccaggc tgggattcct tcaggcgtat acaatgttat tccctgttct 780 cgaaagaatg ccaaggaagt aggggaggca atttgtactg atcctctggt gtccaaaatt 840 tcctttactg gttcaacaac tacaggaaag atcctgttgc accacgcagc aaactctgtg 900 aaaagggtct ccatggagct gggcggcctt gctccattta tagtatttga cagtgccaac 960 gtggaccagg ctgtagcagg ggccatggca tctaaattta ggaacactgg acagacttgt 1020 gtttgctcaa accaattctt ggtgcaaagg ggcatccacg atgcctttgt aaaagcattc 1080 gctgaggcca tgaagaagaa cctgcgcgta ggtaatggat ttgaggaagg aaccactcag 1140 ggcccattaa ttaatgaaaa agcggtagaa aaggtggaga aacaggtgaa tgatgccgtt 1200 tctaaaggtg ccaccattgt gacaggtgga aaacgacacc aacttggaaa aaatttcttt 1260 gagcctaccc tgctgwgcaa tgtcacccag gacatgctgt gcactcatga agagactttt 1320 gggcctctgg caccagttat caagttcaat acagaggagg aggctatagc aatcgctaac 1380 gcagctgacg ttgggttagc aggttatttt tactctcaag acccagccca gatctggaga 1440 gtggcagagc agctggaagt gggcatggtt ggcgtcaacg aaggattaat ttcctctgtg 1500 gagtgccctt ttggtggagt gaagcagtcc ggcctcgggc gagaggggtc caagtatggc 1560 attgatgagt atctggaact caagtacgtg tgttacgggg gcttgtagga ttctttggtt 1620 ctttaaaaaa aattaaaa 1638 // |
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