EBI Dbfetch

ID   AJ575656; SV 1; linear; mRNA; STD; INV; 1681 BP.
XX
AC   AJ575656;
XX
DT   09-JUL-2003 (Rel. 76, Created)
DT   20-NOV-2003 (Rel. 77, Last updated, Version 2)
XX
DE   Ciona intestinalis mRNA for putative protein-O-fucosyltransferase (fut13
DE   gene)
XX
KW   fut13 gene; protein-O-fucosyltransferase.
XX
OS   Ciona intestinalis
OC   Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona;
OC   Phlebobranchia; Cionidae; Ciona.
XX
RN   [1]
RP   1-1681
RA   Oriol R.;
RT   ;
RL   Submitted (07-JUL-2003) to the EMBL/GenBank/DDBJ databases.
RL   Oriol R., U504, Inserm, 16 Av. Paul Vaillant-Couturier, 94807, FRANCE.
XX
RN   [2]
RA   Martinez-Dunker I., Mollicone R., Candelier J.J., Breton C., Oriol R.;
RT   "A new superfamily of protein-O-fucosyltransferases,
RT   alpha2-fucosyltransferases, and alpha6-fucosyltransferases: phylogeny and
RT   identification of conserved peptide motifs";
RL   Glycobiology 13(12):1c-5c(2003).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1681
FT                   /organism="Ciona intestinalis"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7719"
FT   CDS             17..1321
FT                   /gene="fut13"
FT                   /product="putative protein-O-fucosyltransferase"
FT                   /function="adds fucose to serine or threonine in
FT                   glycoproteins"
FT                   /db_xref="InterPro:IPR019378"
FT                   /db_xref="UniProtKB/TrEMBL:Q7YZS7"
FT                   /protein_id="CAE02609.1"
FT                   /translation="MSNCALYFILNLVFILLSYNYAVCEDAKPAGNKRYLLYDCNPGEG
FT                   FNLRRDVYMRVANLVKSLRESKSCKGDDWVLVLPPWGRISYHWKEHGMEQSLIPWSMFF
FT                   NVKSMSGFVPVIEYEDYIEEVGEAVIDELWYLQNYAEGWSSGTWEEKMHERDCIENPVY
FT                   ETDSEGKIRGWFWGYEETYAKTFKCVSVQGMSKLFVKPLCGGNTTAKSVMLDRGENMLH
FT                   DMFGGKRYWDCRRSMVFADALIKTADQFRSKYLDSDDVRDKTVMPENWKDHKCTEDAIG
FT                   GPYIAAHVRRKDFLYARKEFVPSIKQVAKVLSEKMKEYKVDKVFIASDGTKEEMKELKS
FT                   LLPGMFMYKPTKTEKSEFKMGGVAIIDQIICSHARFFMGTKESTFSFRIQEEREIMCFP
FT                   KHTTFNRICSDEGSDDCEQPAKWKIVWKSDSEIWD"
FT   polyA_signal    1624..1629
FT                   /gene="fut13"
FT   polyA_site      1676
FT                   /gene="fut13"
XX
SQ   Sequence 1681 BP; 549 A; 236 C; 389 G; 507 T; 0 other;
     tcggcaagta agaggaatgt ctaattgtgc cttgtatttt attttgaatt tggtttttat        60
     attgctgagt tataactacg ctgtatgtga agatgcaaaa ccagcaggca ataaaaggta       120
     tctcttatat gactgtaacc ctggtgaggg cttcaaccta cgtagagatg tttacatgcg       180
     agttgcaaac cttgtaaaaa gcttgcgtga aagcaaatcc tgtaagggag atgactgggt       240
     tttggttctg cccccttggg gaagaatcag ctaccattgg aaagagcatg gaatggaaca       300
     gagccttatc ccatggtcaa tgttttttaa tgtaaaaagc atgagtgggt ttgttccagt       360
     tattgaatat gaggattaca ttgaagaggt gggagaagca gtgatagacg agttgtggta       420
     tctacagaac tatgcagaag gatggagtag tgggacttgg gaggaaaaaa tgcatgagag       480
     agattgcatt gagaaccctg tttatgaaac tgatagcgaa gggaaaattc gcgggtggtt       540
     ttggggctat gaagaaactt atgcaaaaac ttttaaatgt gtttcggtgc aaggaatgtc       600
     taagctgttt gtgaagccgt tgtgtggtgg aaatacaaca gcaaagtcgg ttatgctgga       660
     cagaggagag aatatgctcc atgatatgtt tggtgggaag aggtattggg attgtagaag       720
     aagcatggtg tttgcggatg ctttgattaa aacagcggac caatttcggt caaagtatct       780
     ggattctgat gatgttcgtg ataaaactgt catgccggaa aattggaagg atcataaatg       840
     tacagaagat gctattggtg gaccatatat tgccgctcat gtaagaagga aggacttcct       900
     gtatgctaga aaggagtttg tgccgtcaat taaacaagtt gcgaaggttt tgagcgaaaa       960
     aatgaaagaa tataaagtgg acaaagtatt tattgcttct gatgggacaa aagaagaaat      1020
     gaaagaacta aaatcgcttc ttcctggcat gtttatgtac aaacccacaa aaactgagaa      1080
     gagtgaattt aaaatgggtg gcgtggcgat catagaccag ataatttgtt cacatgctcg      1140
     atttttcatg ggaaccaaag aatcaacttt ttctttccga attcaagaag agagagaaat      1200
     tatgtgcttt ccaaaacaca caacttttaa cagaatatgc tcggatgagg gcagcgatga      1260
     ttgtgaacaa ccagccaagt ggaaaattgt gtggaaaagt gatagcgaaa tctgggatta      1320
     acttttgcag tgtttgttgc cctgagatta gatcttctac tagttcaaac gtcatttaat      1380
     gataaagtat attatattat tattatacat tctgaaatgt tgcaatttat acagcatctt      1440
     tttctactaa acctttctta ctttgctagt aaatttaacc aattcctata cataacttac      1500
     ttagctaata gcttatctgc aaaaaacata caatcattcc aacacaatgt agaatttatt      1560
     tcttaaaaca aaaaacattt tttcattaat tatttaagat gcagttaact ttttattgtt      1620
     ctgaataaag cgggaaattt attgttacta gaagtgctag tgttgttata cgggcaaaaa      1680
     a                                                                      1681
//