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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ567917; SV 1; linear; mRNA; STD; MAM; 1134 BP.
XX
AC   AJ567917;
XX
DT   23-JUN-2003 (Rel. 76, Created)
DT   20-NOV-2003 (Rel. 77, Last updated, Version 2)
XX
DE   Sus scrofa partial mRNA for protein-O-fucosyltransferase (POFUT1 gene)
XX
KW   POFUT1 gene; protein-O-fucosyltransferase.
XX
OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus.
XX
RN   [1]
RP   1-1134
RA   Oriol R.;
RT   ;
RL   Submitted (20-JUN-2003) to the EMBL/GenBank/DDBJ databases.
RL   Oriol R., U504, Inserm, 16 Av. Paul Vaillant-Couturier, 94807, FRANCE.
XX
RN   [2]
RA   Martinez-Dunker I., Mollicone R., Candelier J.J., Breton C., Oriol R.;
RT   "A new superfamily of protein-O-fucosyltransferases,
RT   alpha2-fucosyltransferases, and alpha6-fucosyltransferases: phylogeny and
RT   identification of conserved peptide motifs";
RL   Glycobiology 13(12):1c-5c(2003).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1134
FT                   /organism="Sus scrofa"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:9823"
FT   CDS             <1..>1134
FT                   /codon_start=1
FT                   /gene="POFUT1"
FT                   /product="protein-O-fucosyltransferase"
FT                   /function="addition of fucose to Ser or Thr in
FT                   glycoproteins"
FT                   /db_xref="GOA:Q7YRZ3"
FT                   /db_xref="InterPro:IPR019378"
FT                   /db_xref="UniProtKB/TrEMBL:Q7YRZ3"
FT                   /protein_id="CAD99201.1"
FT                   /translation="SSPLPPLVSLLLLLLPLPGLPAVSWDPAGYLLYCPCMGRFGNQAD
FT                   HFLGSLAFAKLLNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQVYHRVISLEDF
FT                   MEKLAPTHWPPERRVAYCFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFAG
FT                   ISFSASYKDQWIQRFSPKEHPVLALPGAPAQFPVLEEHRPLQKYMVWSDEMVRTGEAQI
FT                   RAHLIRPYVGIHLRIGSDWKNACAMLKDGTAGAHFMASPQCVGYSRHTAAPLTMTMCLP
FT                   DLKEIRRALKLWVTALSAQSVYIATDSESYLPEIQQLFKGKVKVVSLKPEVAQIDLYIL
FT                   GQADHFIGNCVSSFTAFVKRERDLQGRLSSFFGMDRPP"
XX
SQ   Sequence 1134 BP; 223 A; 358 C; 307 G; 246 T; 0 other;
     tcgtcgcccc tgccgccact tgtgtctctc ctgctgctac ttctgccgct cccggggctg        60
     cctgcggtct cctgggaccc ggccggttat ctgctctact gcccatgcat ggggcgcttt       120
     gggaaccagg ctgatcattt cttgggctcc ctggcatttg caaagctgtt gaaccgcacc       180
     ctggctgtac ctccttggat tgagtaccag catcacaagc ctcctttcac caatctccat       240
     gtgtcctacc aaaagtactt caagctggag cccctccagg tctaccaccg ggtcatcagc       300
     ctggaggact tcatggagaa gctggcaccc acccactggc cccctgagag gcgggtggca       360
     tactgttttg aggtggcagc acagcgaagc ccagataaga agacatgccc catgaaggaa       420
     ggaaacccct ttggcccatt ttgggatcag tttcatgtga gtttcaacaa gtcagaactt       480
     tttgcaggca tttccttcag tgcctcctac aaagaccagt ggatccaaag attttctcca       540
     aaggaacatc cagtgcttgc cctgccaggg gccccggctc agttccccgt cctggaggaa       600
     cataggccac ttcagaaata catggtgtgg tcagacgaga tggtgaggac aggggaggcc       660
     cagatccgtg cccacctcat ccggccctac gtgggcattc acctgcgcat tggctctgac       720
     tggaagaacg cgtgcgccat gctgaaggac ggcactgccg gcgctcactt catggcctcc       780
     ccgcagtgcg tgggttacag ccgccacacc gccgccccgc tcaccatgac catgtgcctc       840
     cccgacctga aggagatcag gcgcgccctg aagctctggg tgacggcgct gagcgcccag       900
     tccgtctaca tcgccacgga ctctgagagt tacctgccgg agatccagca gctcttcaaa       960
     ggaaaggtga aggtggtgag tctgaaacct gaggtggccc agatcgacct gtacatcctt      1020
     ggccaggctg accactttat tggcaactgt gtatcctcct tcactgcctt cgtgaagcgg      1080
     gaacgggatc tccaggggag gctgtcctcc ttcttcggca tggacaggcc tcct            1134
//
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