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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ548833; SV 1; linear; genomic DNA; STD; PRO; 728 BP.
XX
AC   AJ548833;
XX
DT   16-JUL-2003 (Rel. 76, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Fibrobacter succinogenes partial xynC gene for putative endo-1,4-beta
DE   xylanase, strain U
XX
KW   endo-1,4-beta-xylanase; xynC gene.
XX
OS   Fibrobacter succinogenes
OC   Bacteria; Fibrobacteres; Fibrobacterales; Fibrobacteraceae; Fibrobacter.
XX
RN   [1]
RP   1-728
RA   Ribot Y.;
RT   ;
RL   Submitted (28-FEB-2003) to the EMBL/GenBank/DDBJ databases.
RL   Ribot Y., Unite de Microbiologie, Inra CFd Theix, Saint Genes Champanelle,
RL   63122, FRANCE.
XX
RN   [2]
RX   DOI; 10.1128/AEM.70.4.2172-2179.2004
RX   PUBMED; 15066810.
RA   Bera-Maillet C., Ribot Y., Forano E.;
RT   "Fiber-degrading systems of different strains of the genus Fibrobacter";
RL   Appl. Environ. Microbiol. 70(4):2172-2179(2004).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..728
FT                   /organism="Fibrobacter succinogenes"
FT                   /strain="U"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:833"
FT   CDS             <1..>728
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="xynC"
FT                   /product="putative endo-1,4-beta-xylanase"
FT                   /EC_number="3.2.1.8"
FT                   /db_xref="GOA:Q7WYB0"
FT                   /db_xref="HSSP:1H1A"
FT                   /db_xref="InterPro:IPR013319"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WYB0"
FT                   /protein_id="CAD70178.1"
FT                   /translation="NTLANDMPGSWIGNERKGTITVDGGTYTVYRNTRTGPAIKNSGNV
FT                   TFYQYFSVRTSPRDCGTINISEHMRQWEKMGMTMGKLYEAKVLGEAGNVNGEVRGGHMD
FT                   FPHAKVYVKNGSDPVSSSSVKSSSSTDAPKSSSSKGNGNVSGKIDACKDVMGHEGKETR
FT                   TQGQNNSSVTGNVGSSPYHYEIWYQGGNNSMTFYDNGTYKASWNGTNDFLARVGFKYDE
FT                   KHTYEELGPIDAYYKWSKQG"
XX
SQ   Sequence 728 BP; 197 A; 170 C; 189 G; 172 T; 0 other;
     taacaccctc gccaatgaca tgccgggtag ctggattggt aacgaaagaa agggtaccat        60
     tacggttgac ggcggtacct atactgttta tcgcaatacc cgtacaggtc cggctattaa       120
     gaacagtggt aacgtgacgt tctatcagta tttcagcgtt cgtacctctc cgcgcgattg       180
     cggtaccatc aatatttccg aacacatgag acagtgggaa aagatgggca tgaccatggg       240
     taagctctac gaagccaagg tgcttggtga agctggtaac gtgaatggcg aagtccgcgg       300
     tggtcacatg gacttcccgc atgccaaggt ctatgtgaaa aacggctctg atccggtttc       360
     ttcctcttct gtgaagtcta gctcttctac ggatgcaccg aaatccagtt cctctaaggg       420
     taacggcaac gtttctggta aaattgacgc ctgcaaggac gttatgggcc atgaaggcaa       480
     agaaacgaga actcagggtc agaacaactc tagcgtgacg ggtaacgtcg gcagctctcc       540
     gtaccactat gaaatttggt atcagggtgg taacaactcc atgacgttct acgacaacgg       600
     tacttataag gcaagctgga atggtaccaa cgacttcctt gctcgtgtcg gtttcaagta       660
     tgatgaaaag cacacttacg aagaacttgg ccctatcgat gcctactaca agtggagcaa       720
     gcagggta                                                                728
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