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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ548832; SV 1; linear; genomic DNA; STD; PRO; 725 BP.
XX
AC   AJ548832;
XX
DT   16-JUL-2003 (Rel. 76, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Fibrobacter intestinalis partial xynC gene for putative endo-1,4-beta
DE   xylanase, strain NR9
XX
KW   endo-1,4-beta-xylanase; xynC gene.
XX
OS   Fibrobacter intestinalis
OC   Bacteria; Fibrobacteres; Fibrobacterales; Fibrobacteraceae; Fibrobacter.
XX
RN   [1]
RP   1-725
RA   Ribot Y.;
RT   ;
RL   Submitted (28-FEB-2003) to the EMBL/GenBank/DDBJ databases.
RL   Ribot Y., Unite de Microbiologie, Inra CFd Theix, Saint Genes Champanelle,
RL   63122, FRANCE.
XX
RN   [2]
RX   DOI; 10.1128/AEM.70.4.2172-2179.2004
RX   PUBMED; 15066810.
RA   Bera-Maillet C., Ribot Y., Forano E.;
RT   "Fiber-degrading systems of different strains of the genus Fibrobacter";
RL   Appl. Environ. Microbiol. 70(4):2172-2179(2004).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..725
FT                   /organism="Fibrobacter intestinalis"
FT                   /strain="NR9"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:28122"
FT   CDS             <1..>725
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="xynC"
FT                   /product="putative endo-1,4-beta-xylanase"
FT                   /EC_number="3.2.1.8"
FT                   /db_xref="GOA:Q7WYB1"
FT                   /db_xref="HSSP:1H1A"
FT                   /db_xref="InterPro:IPR013319"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WYB1"
FT                   /protein_id="CAD70177.1"
FT                   /translation="NTLANDMPGSWIGNERKGTITVDGGTYTVYRNTRTGPAIKNSGNV
FT                   TFYQYFSVRTSPRDCGTINISEHMRQWEKMGMTMGKLYEAKVLGEAGNVNGEVRGGHMD
FT                   FPHAKVYVKNGSDPASSSSVKSSSSSAAPKSSSSKGGSVSGTIDACKDAMGHEGKETRT
FT                   QGQNNSSVTGNVGSSPYHYEIWYQGGNNSMTFYDNGTYKASWNGTNDFLARVGFKYNED
FT                   KTYEQVGPIDAYFKWSKQG"
XX
SQ   Sequence 725 BP; 188 A; 166 C; 192 G; 179 T; 0 other;
     taacaccctc gccaatgaca tgccgggtag ctggattggt aacgaaagaa agggtaccat        60
     tacggttgac ggcggtacct atactgttta tcgcaatacc cgtacaggtc cggctattaa       120
     gaacagcggt aacgtgacgt tctatcagta tttcagcgtt cgtacctctc cgcgcgattg       180
     tggtaccatc aatatttccg aacacatgag acagtgggaa aagatgggca tgacgatggg       240
     taagctctac gaagctaagg tgcttggtga agctggtaac gtcaatggtg aagttcgtgg       300
     cggtcacatg gatttcccgc atgccaaggt ctatgtgaaa aacggctctg atccggcttc       360
     ttcctcttct gtgaagtcta gctcttctag cgcagctccg aagtccagtt cttctaaggg       420
     tggttctgtt tccggtacga ttgacgcttg caaggacgct atgggccatg aaggcaaaga       480
     aacgagaact cagggtcaga acaactctag cgtgacgggt aacgtcggca gctctccgta       540
     ccactatgaa atttggtatc agggtggtaa caactccatg acgttctacg acaacggtac       600
     ttataaggca agctggaatg gtaccaacga cttccttgct cgtgtcggct tcaagtataa       660
     cgaagataag acctatgaac aggttggccc tatcgatgcc tatttcaagt ggagcaagca       720
     gggta                                                                   725
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