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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ515152; SV 1; linear; mRNA; STD; INV; 1897 BP.
XX
AC   AJ515152;
XX
DT   05-NOV-2002 (Rel. 73, Created)
DT   01-FEB-2003 (Rel. 74, Last updated, Version 2)
XX
DE   Ciona intestinalis mRNA for putative alpha-6-fucosyltransferase (FUT8
DE   gene), clone 5
XX
KW   alpha-6-fucosyltransferase; alternative splicing; FUT8 gene.
XX
OS   Ciona intestinalis
OC   Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona;
OC   Phlebobranchia; Cionidae; Ciona.
XX
RN   [1]
RP   1-1897
RA   Oriol R.;
RT   ;
RL   Submitted (03-NOV-2002) to the EMBL/GenBank/DDBJ databases.
RL   Oriol R., U504, INSERM, 16 Av. Paul Vaillant-Couturier, 94807, Villejuif,
RL   FRANCE.
XX
RN   [2]
RA   Mollicone R., Michalski J.C., Bauvy C., Cailleau-Thomas A., Candelier J.J.,
RA   Martinez-Duncker I., Breton C., Codogno P., Oriol R.;
RT   "Splice variants of alpha-6-fucosyltransferase are expressed early in human
RT   embryogenesis";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1897
FT                   /organism="Ciona intestinalis"
FT                   /mol_type="mRNA"
FT                   /clone="5"
FT                   /db_xref="taxon:7719"
FT   CDS             29..1711
FT                   /gene="FUT8"
FT                   /product="putative alpha-6-fucosyltransferase"
FT                   /function="adds fucose to the internal GlcNAc of the core
FT                   of N-glycans"
FT                   /EC_number="2.4.1.68"
FT                   /note="long variant"
FT                   /db_xref="GOA:Q8IFW8"
FT                   /db_xref="InterPro:IPR015827"
FT                   /db_xref="UniProtKB/TrEMBL:Q8IFW8"
FT                   /protein_id="CAD56162.1"
FT                   /translation="MRLRQFLHMDLRWRTFIVTFSIACCTFFYMFQITSRKSRVIVEGK
FT                   FTKTERWFHNNDAGESFDLQERQHIRNAMSDVEQIQAMVRHQLIKIYQESPKAQPLVIK
FT                   MIKQFFPLKSALTAEIEELKELTKQEDGELFKKLRKTVERRIDLNQNPAKCSTAKKLYC
FT                   NVQSACGFGCIIHHYTICLFISLGTGRVMMSNMSNLAYPNMDKIFLPLSRTCLTAEGNV
FT                   DDYPEWESPNDEHPSSSDAPIVKVSIVYHRDRKTPFAPWTVPKDLIPSLERIHGNPMLW
FT                   WIGQLQSYLMRPQKWLSDSIKEAKGEEFQHPIVGVHVRRSDKISEASYMANDAYMTAVS
FT                   DWYDTYEMRHPNETVVRRIFLATDDILIGSQLKITYPKYRIVQIQKNAVVALAKRFSGS
FT                   GLEGILQDVFLMAECDYFVGTMSSNVGRLVHELMQTRDYDTSNAAITIDHSFRYYGQFP
FT                   ERHLVLNDHHAENPCPPEFEPLPPNQFPKYVRERLQLENILKQGCEVELRKGDIIDAWP
FT                   ELNNNYMRGGVNIRSGRWGLYPKFKVKQIIEPAPYPVIENTSL"
XX
SQ   Sequence 1897 BP; 608 A; 389 C; 404 G; 496 T; 0 other;
     cggcacgagg gtaaactcta ccgctgcaat gcgtttaagg caatttttac acatggactt        60
     aaggtggcgc actttcattg tgacgttttc aattgcttgc tgcacgtttt tttacatgtt       120
     ccaaatcacg tctcgtaaaa gccgagtaat cgttgaaggc aagttcacaa agacagaacg       180
     ttggttccac aataatgatg ctggggaatc attcgattta caagaaaggc aacatataag       240
     aaacgctatg tcggatgtag aacagattca agcaatggtc agacatcagc tcattaaaat       300
     ttaccaagaa tcaccaaagg cgcaacctct cgtgattaaa atgattaaac agttttttcc       360
     actgaaaagt gccctgaccg ccgaaatcga agagttaaaa gagctaacaa agcaagagga       420
     tggagaatta ttcaagaaac taaggaagac tgtggaaaga agaattgatc tcaaccagaa       480
     tcctgcaaaa tgctctacag cgaagaagtt gtattgtaat gttcaatccg catgcggatt       540
     tggttgcatc atacatcatt atacaatctg cttgttcata tctctcggta caggaagagt       600
     aatgatgtct aatatgagta acctcgctta cccaaacatg gacaagatat ttcttccact       660
     aagcagaaca tgtttaacag ctgagggaaa cgttgatgac tacccggaat gggaaagtcc       720
     aaacgacgag catccaagtt cttcagacgc accaatcgta aaggtgtcta tcgtttacca       780
     cagagataga aaaacgccat tcgctccctg gacggtgcca aaggatttaa ttccaagttt       840
     agaacggatt cacggcaatc cgatgttatg gtggatcgga cagttgcaat cttatcttat       900
     gcgacctcaa aaatggctct ctgattcaat caaagaagcg aaaggcgaag aatttcagca       960
     tccgatagtg ggggtacacg ttcgaagatc tgacaaaata tcagaagcct catatatggc      1020
     gaacgacgct tacatgacag cggtatcaga ctggtatgac acctacgaga tgcgacatcc      1080
     aaacgaaact gtcgtcagaa gaatatttct tgcaaccgat gacatattga tcggatccca      1140
     actcaagatt acctacccaa aatacaggat tgtgcagata cagaagaacg ctgttgttgc      1200
     gcttgcgaaa cgtttcagcg gatctggttt ggaaggtatt ctacaagacg ttttcctgat      1260
     ggccgaatgc gattattttg ttggcacaat gtcttcaaac gttggaagac ttgtgcacga      1320
     actgatgcag acacgcgact atgatacaag taatgctgcc atcacaattg accactcgtt      1380
     cagatattat ggccagtttc cggagagaca tttagtttta aatgaccacc acgctgaaaa      1440
     cccttgcccc cctgagttcg aacctctacc tcccaaccag ttcccaaaat atgtgagaga      1500
     gagattgcaa ttggaaaata ttctcaagca agggtgcgag gtggaattac gaaaaggtga      1560
     tataattgat gcgtggccag aactaaacaa caactacatg agaggtgggg tgaacattag      1620
     gagcggtcgg tggggtcttt accccaagtt taaggtgaaa caaataatcg aaccagcccc      1680
     ttatccagtt atcgagaata caagtttgta acaatacgaa agaacaatat atgattgtgt      1740
     tttcaatgtg acgtcatatg atttcacatt aaatattaaa ttctttaagt atcactgtat      1800
     attaccgctc acgtgactta tttaatgttt gcatttcgat ttttaatttg acattcaata      1860
     aacttccata ttcgagtgcg gcaatcgccc tgcgcgg                               1897
//
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