EBI Dbfetch

ID   AJ515151; SV 1; linear; mRNA; STD; INV; 1761 BP.
XX
AC   AJ515151;
XX
DT   05-NOV-2002 (Rel. 73, Created)
DT   01-FEB-2003 (Rel. 74, Last updated, Version 3)
XX
DE   Ciona intestinalis mRNA for putative alpha-6-fucosyltransferase (FUT8
DE   gene), clone 2
XX
KW   alpha-6-fucosyltransferase; alternative splicing; FUT8 gene.
XX
OS   Ciona intestinalis
OC   Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona;
OC   Phlebobranchia; Cionidae; Ciona.
XX
RN   [1]
RP   1-1761
RA   Oriol R.;
RT   ;
RL   Submitted (03-NOV-2002) to the EMBL/GenBank/DDBJ databases.
RL   Oriol R., U504, INSERM, 16 Av. Paul Vaillant-Couturier, 94807, Villejuif,
RL   FRANCE.
XX
RN   [2]
RA   Mollicone R., Michalski J.C., Bauvy C., Cailleau-Thomas A., Candelier J.J.,
RA   Martinez-Duncker I., Breton C., Codogno P., Oriol R.;
RT   "Splice variants of alpha-6-fucosyltransferase are expressed early in human
RT   embryogenesis";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1761
FT                   /organism="Ciona intestinalis"
FT                   /mol_type="mRNA"
FT                   /clone="2"
FT                   /db_xref="taxon:7719"
FT   CDS             122..1660
FT                   /gene="FUT8"
FT                   /product="putative alpha-6-fucosyltransferase"
FT                   /function="adds fucose to the internal GlcNAc of the core
FT                   of N-glycans"
FT                   /EC_number="2.4.1.68"
FT                   /note="short variant"
FT                   /db_xref="GOA:Q8IFW9"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="UniProtKB/TrEMBL:Q8IFW9"
FT                   /protein_id="CAD56161.1"
FT                   /translation="MRNSPCMFYCKIKESLKHGLKVRSLIRSVIVKSFQIQQLLNHDMN
FT                   KLAEKNKDLVQRLVNWDRLLVPLENSLINEMTLLNNKDEEGDRYKLRELNRRAQHLIQH
FT                   TQNQKNCRRAKKLFCNVEAKCGFGCLVHHYGVCLFLAIGTNRVMQWDLKAITDYPGLDE
FT                   VFMPLSETCNNITGGKEAPEWYSEKSSNPTPVDTEVVKVTLIDSHDRQTPFAPMTIPEE
FT                   FYPLVKPIHGDPLVWWAGQVQSYLMRPKAWVTREVQIIKQDIGFKHPVVGVHIRRTDKS
FT                   NEANFQRMEAYMDPVANWYDKYVINNDVTNITKLVYVATDDLEYMDMLRNLYPEFTFIT
FT                   NQQSTSHADTSSRLSSDGLKGIVTDVHLLVECDHFVGTFSSNIGRLVYEMKQQYGSDPT
FT                   FTTTNIDHAYRYWGQAIQLHKAVMDHKPSLGFCKRAAPDMRQIDLSKMELMCEIEIKVG
FT                   DIIEVSPESYHGYRSAGKNVRTQMFGAYPLFKVKDIIKTAPYPSFYRTKSFEVE"
FT   polyA_signal    1733..1738
FT                   /gene="FUT8"
FT                   /note="alternative"
FT   polyA_site      1752
FT                   /gene="FUT8"
FT                   /note="alternative"
XX
SQ   Sequence 1761 BP; 576 A; 335 C; 356 G; 494 T; 0 other;
     cgaggctttt aactgcgccg tttatagttg gtattaaact gaagtgacat ttttaaatag        60
     tttaaatgtt tactgtccgt tttaaaaaga tatattttgt gttagttgtt gtagcattta       120
     tatgcgtaac tctccatgta tgttttattg caagataaaa gaaagcttaa aacatggact       180
     taaggtgaga agtttaatca gaagcgtcat cgttaagtca tttcaaattc aacaactgct       240
     taatcacgat atgaacaaat tggctgagaa aaacaaagat ttagttcagc ggttggtcaa       300
     ctgggatcga ctgttagttc cattggaaaa ttccttaata aatgaaatga cgctgttaaa       360
     caacaaagac gaggaaggcg atcgttacaa acttcgtgaa ttgaatcgta gagcacaaca       420
     tctgatacag cacacacaaa accagaaaaa ctgtcgcaga gcaaagaaac tattctgtaa       480
     tgttgaagca aaatgcggct tcggttgttt ggttcatcat tacggcgtct gcttgtttct       540
     agctatcggt acaaaccgag taatgcaatg ggacctcaag gcaatcactg actatcctgg       600
     gttagatgaa gtcttcatgc cactaagtga aacatgcaac aatattactg gagggaagga       660
     agcaccagaa tggtacagtg aaaagagttc gaatcccacc ccggtcgata cagaagttgt       720
     aaaagtgact ctaatagact cacacgaccg acagactccg tttgctccaa tgacaatacc       780
     ggaggaattt tatcctctcg ttaaaccgat ccacggagat cctctcgtgt ggtgggcagg       840
     tcaagttcaa agttatctta tgagacccaa agcatgggtg acgcgagagg ttcaaattat       900
     aaagcaagat attggtttta agcatcccgt agttggtgtt cacattcgaa gaacggataa       960
     atcaaacgaa gcaaactttc aacgaatgga agcttacatg gaccctgtgg cgaattggta      1020
     cgacaaatac gtcatcaata atgacgttac aaacatcacc aaacttgtct acgttgcaac      1080
     ggacgatctc gaatatatgg atatgctgag aaatctatac cctgagttca cgttcattac      1140
     aaaccaacaa tcaacaagcc acgccgatac ttcgtcaaga ttaagcagtg atggtttgaa      1200
     aggaatcgtc actgacgttc atttactagt agaatgcgat cattttgttg gaactttttc      1260
     atctaatatt ggacgcttgg tatatgaaat gaagcaacag tacggctcag atcccacttt      1320
     cactacaact aatatcgatc atgcttatcg ttactggggg caagctatcc aacttcacaa      1380
     agcggttatg gaccacaaac catcccttgg attttgcaaa cgtgctgcac cagacatgag      1440
     acaaattgat ctttccaaaa tggaactaat gtgtgagatt gaaattaaag tcggagatat      1500
     tatcgaggtt tcccccgagt catatcacgg ctaccgatct gctggcaaaa acgtcagaac      1560
     tcaaatgttt ggcgcctatc cgttgtttaa agtgaaagac attatcaaaa ctgctccgta      1620
     tccttcgttt tatagaacca aatcgtttga agtagagtga taaatgcatc tataataatg      1680
     caactgttag ctttatttgt tctatatttt gtttgcgtaa aaacgttgtg gacataaatg      1740
     gttcaatctt taaaaaaaaa a                                                1761
//