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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ514324; SV 1; linear; mRNA; STD; HUM; 1396 BP.
XX
AC   AJ514324;
XX
DT   28-OCT-2002 (Rel. 73, Created)
DT   07-OCT-2008 (Rel. 97, Last updated, Version 4)
XX
DE   Homo sapiens mRNA for fucosyltransferase 8 (FUT8 gene), retina isoform,
DE   clone Rc1000
XX
KW   alternative splicing; fucosyltransferase 8; FUT8 gene.
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1396
RA   Oriol R.;
RT   ;
RL   Submitted (25-OCT-2002) to the EMBL/GenBank/DDBJ databases.
RL   Oriol R., U504, INSERM, 16 Av. Paul Vaillant-Couturier, 94807, Villejuif,
RL   FRANCE.
XX
RN   [2]
RX   DOI; 10.1093/glycob/cwh006
RX   PUBMED; 14514715.
RA   Martinez-Duncker I., Michalski J.C., Bauvy C., Candelier J.J.,
RA   Mennesson B., Codogno P., Oriol R., Mollicone R.;
RT   "Activity and tissue distribution of splice variants of
RT   alpha6-fucosyltransferase in human embryogenesis";
RL   Glycobiology 14(1):13-25(2004).
XX
RN   [3]
RX   DOI; 10.1159/000066611
RX   PUBMED; 12438718.
RA   Coullin P., Crooijmans R.P.M.A., Groenen M.A.M., Heilig R., Mollicone R.,
RA   Oriol R., Candelier J.J.;
RT   "Assignment of FUT8 to chicken chromosome band 5q1.4 and to human
RT   chromosome 14q23.2-->q24.1 by in situ hybridization. Conserved and compared
RT   synteny between human and chicken";
RL   Cytogenet. Genome Res. 97(3-4):234-238(2002).
XX
DR   ASTD; TRAN00000049674.
DR   Ensembl-Gn; ENSG00000033170; Homo_sapiens.
DR   Ensembl-Tr; ENST00000342677; Homo_sapiens.
DR   H-InvDB; HIT000248383.
XX
CC   Related sequence: AJ514325
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1396
FT                   /organism="Homo sapiens"
FT                   /chromosome="14"
FT                   /map="14q23.2-24.1"
FT                   /mol_type="mRNA"
FT                   /country="France"
FT                   /dev_stage="40-70 day"
FT                   /clone="Rc1000"
FT                   /tissue_type="whole embryo"
FT                   /db_xref="taxon:9606"
FT   CDS             26..535
FT                   /gene="FUT8"
FT                   /product="fucosyltransferase 8"
FT                   /note="retina isoform"
FT                   /db_xref="GOA:Q8IUA5"
FT                   /db_xref="HGNC:4019"
FT                   /db_xref="InterPro:IPR001452"
FT                   /db_xref="UniProtKB/TrEMBL:Q8IUA5"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAD55804.1"
FT                   /translation="MHRQIWHLHWTLVRYPNYEFISDNSISWSAGLHNRYTENSLRGVI
FT                   LDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAI
FT                   YAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPT
FT                   YPEAEK"
FT   3'UTR           218..1369
FT                   /gene="FUT8"
FT   polyA_signal    1248..1253
FT                   /gene="FUT8"
FT                   /note="alternative"
FT   polyA_site      1263
FT                   /gene="FUT8"
FT                   /note="alternative"
FT   polyA_signal    1336..1341
FT                   /gene="FUT8"
FT   polyA_site      1372
FT                   /gene="FUT8"
XX
SQ   Sequence 1396 BP; 449 A; 261 C; 260 G; 426 T; 0 other;
     ctgtatttag gcctgtaagt gagacatgca cagacagatc tggcatctcc actggacact        60
     ggtcaggtac cccaattatg aatttattag tgataactct atttcctggt cagctggact       120
     gcacaatcga tacacagaaa attcacttcg tggagtgatc ctggatatac attttctctc       180
     tcaggcagac ttcctagtgt gtactttttc atcccaggtc tgtcgagttg cttatgaaat       240
     tatgcaaaca ctacatcctg atgcctctgc aaacttccat tctttagatg acatctacta       300
     ttttgggggc cagaatgccc acaatcaaat tgccatttat gctcaccaac cccgaactgc       360
     agatgaaatt cccatggaac ctggagatat cattggtgtg gctggaaatc attgggatgg       420
     ctattctaaa ggtgtcaaca ggaaattggg aaggacgggc ctatatccct cctacaaagt       480
     tcgagagaag atagaaacgg tcaagtaccc cacatatcct gaggctgaga aataaagctc       540
     agatggaaga gataaacgac caaactcagt tcgaccaaac tcagttcaaa ccatttgagc       600
     caaactgtag atgaagaggg ctctgatcta acaaaataag gttatatgag tagatactct       660
     cagcaccaag agcagctggg aactgacata ggcttcaatt ggtggaattc ctctttaaca       720
     agggctgcaa tgcctcatac ccatgcacag tacaataatg tactcacata taacatgcaa       780
     acaggttgtt ttctactttg cccctttcag tatgtcccca taagacaaac actgccatat       840
     tgtgtaattt aagtgacaca gacattttgt gtgagactta aaacatggtg cctatatctg       900
     agagacctgt gtgaactatt gagaagatcg gaacagctcc ttactctgag gaagttgatt       960
     cttatttgat ggtggtattg tgaccactga attcactcca gtcaacagat tcagaatgag      1020
     aatggacgtt tggttttttt ttgtttttgt ttttgttttt tcctttataa ggttgtctgt      1080
     tttttttttt ttaaataatt gcatcagttc attgacctca tcattaataa gtgaagaata      1140
     catcagaaaa taaaatattc actctccatt agaaaatttt gtaaaacaat gccatgaaca      1200
     aattctttag tactcaatgt ttctggacat tctctttgat aacaaaaaat aaattttaaa      1260
     aaggaatttt gtaaaagttt ctagaatttt atatcattgg atgatatgtt gatcagcctt      1320
     atgtggaaga actgtgataa aaaaaggagc tttttagttt ttcagcttaa aaaaaaaaaa      1380
     aaaaaaaaaa aaaaaa                                                      1396
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