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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ508931; SV 1; linear; genomic DNA; STD; FUN; 1281 BP.
XX
AC   AJ508931;
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DT   01-OCT-2002 (Rel. 73, Created)
DT   24-JUL-2007 (Rel. 92, Last updated, Version 3)
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DE   Chaetomium thermophilum xyn11A gene for endoxylanase 11A
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KW   endoxylanase 11a; xyn11A gene.
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OS   Chaetomium thermophilum
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC   Sordariomycetidae; Sordariales; Chaetomiaceae; Chaetomium.
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RN   [1]
RP   1-1281
RA   Paloheimo M.;
RT   ;
RL   Submitted (26-SEP-2002) to the EMBL/GenBank/DDBJ databases.
RL   Paloheimo M., Roal Oy, Tykkimaentie 15, Rajamaki FIN-05200, Finland.
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RN   [2]
RX   DOI; 10.1007/s00253-007-1020-y
RX   PUBMED; 17549471.
RA   Mantyla A., Paloheimo M., Hakola S., Lindberg E., Leskinen S., Kallio J.,
RA   Vehmaanpera J., Lantto R., Suominen P.;
RT   "Production in Trichoderma reesei of three xylanases from Chaetomium
RT   thermophilum: a recombinant thermoxylanase for biobleaching of kraft pulp";
RL   Appl. Microbiol. Biotechnol. 76(2):377-386(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1..1281
FT                   /organism="Chaetomium thermophilum"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:209285"
FT   CDS             join(195..423,483..1039)
FT                   /gene="xyn11A"
FT                   /product="endoxylanase 11A"
FT                   /db_xref="GOA:Q8J1V6"
FT                   /db_xref="InterPro:IPR018208"
FT                   /db_xref="PDB:1H1A"
FT                   /db_xref="UniProtKB/TrEMBL:Q8J1V6"
FT                   /protein_id="CAD48749.1"
FT                   /translation="MVNFSTLFLAASTAALAAAAPSIEKRQTLTSSATGTHNGYYYSFW
FT                   TDGQGNIRFNLESGGQYSVTWSGNGNWVGGKGWNPGTDNRVINYTADYRPNGNSYLAVY
FT                   GWTRNPLIEYYVVESFGTYDPSTGATRMGSVTTDGGTYNIYRTQRVNAPSIEGTKTFYQ
FT                   YWSVRTSKRTGGTVTMANHFNAWRQAGLQLGSHDYQIVATEGYYSSGSATVNVGGSTTG
FT                   GNNGGNNGGNNGGNNGGNTGSNVSISRPRKMGSLASTRS"
FT   sig_peptide     195..251
FT                   /gene="xyn11A"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT   mat_peptide     join(252..423,483..1036)
FT                   /gene="xyn11A"
FT                   /product="endoxylanase 11A"
XX
SQ   Sequence 1281 BP; 308 A; 385 C; 324 G; 264 T; 0 other;
     actgtctaga tgcaactata cccagcagag gttgtgatcg agctcaagtc taaacttgga        60
     agaagcaccc agaggacagg tttggaggac ctctcacgaa tacataaagg cctcaagacc       120
     tctcccagag cttcctctac tcctttcatc ttcaccgacc gtgatacaaa cagaaaatag       180
     catcatatat caagatggtc aacttctcaa ctctcttcct cgcggcttcg accgcagcac       240
     ttgctgctgc tgcccccagc atcgagaagc gtcagacgct caccagcagt gccaccggca       300
     cccacaatgg ctactactac agcttctgga ccgatggcca aggcaacatt cgcttcaacc       360
     tcgagagcgg tggccagtac agcgtgacat ggtctggtaa cggcaactgg gttggcggca       420
     aaggtatgtc tctttaatgt ttccagcgct atggaatgaa ctaaatgcta acctgttaac       480
     aggctggaac cccggtaccg ataaccgtgt catcaactac acagccgact acagacccaa       540
     cggcaactcc tacctcgccg tctacggctg gacccgcaac ccgctgatcg agtactacgt       600
     ggtcgagagc ttcggcactt acgacccgtc gacgggcgcc acccgcatgg gcagcgtgac       660
     caccgacggc ggcacctaca acatctaccg cacgcagcgc gtcaacgcgc cctccatcga       720
     gggcaccaag accttctacc aatactggtc tgtgcgcacc tccaagcgca ccggcggtac       780
     tgttaccatg gccaaccact tcaatgcttg gaggcaggct ggtctgcagc tgggttccca       840
     tgattatcag attgtggcta ctgagggtta ctactcgtct ggctcggcga ctgtcaatgt       900
     tggcggcagc actactggtg gtaacaatgg cggtaacaat ggcggtaaca atggcggtaa       960
     caatggcggc aacactggct cgaacgtgag tatctccaga ccccgcaaga tgggaagttt      1020
     agccagtaca agaagctaac aagcatgcag tgctctccta tttggggtca gtgcggcggc      1080
     cagggctgga ccggcccgac ctgctgccag agcggctcga cctgccgctt ccagaacaac      1140
     tggtactctc agtgcctgta aattttcgaa cttcatcaca agcatccgcc aaattctgtc      1200
     gtcgtcaaat cacgcaggct tgggaacttt ttatctcatg tcctgggcca ggacgcagga      1260
     gttaggaccc ggatgaggcc t                                                1281
//
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