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EBI Dbfetch

ID   AJ508404; SV 1; linear; genomic DNA; STD; PRO; 3420 BP.
XX
AC   AJ508404;
XX
DT   19-SEP-2002 (Rel. 73, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Clostridium stercorarium bxlA gene for beta-xylosidase A
XX
KW   beta-xylosidase A; bxlA gene.
XX
OS   Clostridium stercorarium
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
OC   Clostridium.
XX
RN   [1]
RP   1-3420
RA   Schwarz W.H.;
RT   ;
RL   Submitted (18-SEP-2002) to the EMBL/GenBank/DDBJ databases.
RL   Schwarz W.H., Research Group Microbiology, Technical University Muenchen,
RL   Am Hochanger 4, 85350 Freising, GERMANY.
XX
RN   [2]
RA   Adelsberger H.;
RT   "Das Hemicellulase-System von Clostridium stercorarium: Struktur und
RT   Expression des Xylanase-Gens xynA und beta-Xylosidase-Gene bxlA und bxlB,
RT   sowie Charakterisierung der rekombinanten Genprodukte.";
RL   Thesis (1992), Department of Inst. Microbiology, Technical University,
RL   Muenchen, Germany.
XX
RN   [3]
RX   DOI; 10.1099/mic.0.27066-0
RX   PUBMED; 15256568.
RA   Adelsberger H., Hertel C., Glawischnig E., Zverlov V.V., Schwarz W.H.;
RT   "Enzyme system of Clostridium stercorarium for hydrolysis of arabinoxylan:
RT   reconstitution of the in vivo system from recombinant enzymes";
RL   Microbiology (Reading, Engl.) 150(Pt 7):2257-2266(2004).
XX
DR   CABRI; NCIMB 11745.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3420
FT                   /organism="Clostridium stercorarium"
FT                   /strain="NCIMB 11745"
FT                   /mol_type="genomic DNA"
FT                   /note="type strain"
FT                   /db_xref="taxon:1510"
FT   RBS             1081..1085
FT   CDS             1099..2601
FT                   /transl_table=11
FT                   /gene="bxlA"
FT                   /product="beta-xylosidase A"
FT                   /EC_number="3.2.1.37"
FT                   /db_xref="GOA:Q8GJ43"
FT                   /db_xref="HSSP:1UHV"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:Q8GJ43"
FT                   /protein_id="CAD48308.1"
FT                   /translation="MAREITIPAAGKPFKNNATFCVGSGRLGLALQKEYIDHLKIVQER
FT                   IHFKYIRGHGLFCDDVGIYRETEEDGKHVAYYNFTYLDRIIDSFLEHDIRPFLELGFMP
FT                   EKLKSGEQTIFYWKGNTTPPVSYEKWAELVETTLAHLIDRYGAEEVITWPVEVWNEPNI
FT                   AFWAGTMEEYFKLYEYSAKRERVDPNKVGGPVICGIETEKWLRAFFEHCIENNLPLDFV
FT                   SRHCYTVGKPVRKGQFIYHEIFSPTYMIEELKETRKIMADYPQIANLPLHITEFNSSYV
FT                   PVCPVHDTTFQAAYIARILSEAGEYADSYSYWTFSDVFEEYDVPRSAFHGGFGLVALNS
FT                   IKKPVFHTFEFFANAGKELLYRDENLIVTRDDKRYVIIGWNYHDTRKGEPGPDKEYVLS
FT                   IPSIGQQAILIKKQVGGNYANPLQTWSNLGKPRTLNKEQRKILMAASEPLQTDVKLFDE
FT                   KGFYKVKLTIQCNHLYMLEILPVKDFTDTYDGFEPDEFFGLE"
FT   mat_peptide     1102..2598
FT                   /gene="bxlA"
FT                   /product="BxlA"
FT   stem_loop       2743..2768
FT                   /function="transcription terminator"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
XX
SQ   Sequence 3420 BP; 1039 A; 615 C; 833 G; 933 T; 0 other;
     ttcatccata aaggaatatc cgatagaggc agcggctgag actgcatcga gaaactgggg        60
     agggaaaacg gttattatac attgcgacag ctgcggtgcg gaaactgtta tggatgcaaa       120
     ccggttaacg gcagaatgcg ctttctgcgg ttcaatacat atcagaaccc agtccaatga       180
     ggacgttatt aagcctgaat cccttgttcc gttcaaaatt gacaagcaaa ctgcaataaa       240
     taagttcagg acatggctta aaaaacgcta tctgtcaccg ggcaacctaa aaattttggc       300
     acgggaagag aaaatacatg gagtgtatat tccgttctgg acgttcgatg ccgacacaaa       360
     ctctttttac actgccgaaa agggaatata ctactatgac accgagcgtg tttatgtgaa       420
     ggacggaaaa ggcggaggac ggtatgagca gagaagagtc agaaaaaccc gctggtaccc       480
     tacatcaggc gtatacagac attactttaa cgacgttttg gtatgtgctt caaatcagga       540
     aggaaggaac ctgataaaaa gaattgaacc tttttataca acggagctgg ttccgtacag       600
     aagtgaatat ttgccgggct tttgcgccga aaaatacagt attggccttg aggagggatt       660
     cattgaagca agagcgagaa tggattccga gctgagaaaa cttatcacca ggcacattgc       720
     tgccgatgag gtaaggaatt taagagtacg aacgtcttat tcaaacgtaa aattcaaaca       780
     tatccttttg cccgtgtgga tagctgcata cagatacggg gacaggatat acaaatttgt       840
     tgtaaacggc cagaccgggc tggtaaaggg tgaagcgcca gtcagtatcg taaaggcgcg       900
     caatagctgt tgtggtattg ctcttattgt gctgtattat ttaccgcaca aacggttagc       960
     atgcttactt atgttgtccg gattggcaga aaaccacaga agtagtataa tattgaccgg      1020
     tatttccaca gttttctttt aggctgtggc agtaaatgac ggcgataggc ggaatacaat      1080
     gcggaggagg atatttctat ggcaagggaa atcacaatac cggctgccgg taagcctttt      1140
     aaaaacaacg ccaccttctg cgtgggaagc ggaagattag gactggcact gcagaaggaa      1200
     tacatagacc atttgaaaat tgtccaggaa cgcatccatt ttaaatatat ccgcgggcac      1260
     gggctgttct gcgatgatgt gggaatatac cgcgaaaccg aagaggacgg gaagcacgtc      1320
     gcctactata attttacata ccttgaccgc attatagatt cttttcttga acacgatata      1380
     agaccgtttc ttgaattggg atttatgcct gaaaagctga aatccgggga acagacaata      1440
     ttctactgga aaggaaatac cacgccccct gtttcgtatg aaaaatgggc cgaacttgtg      1500
     gaaactacgt tagcccatct tatcgacagg tatggagcgg aagaggttat aacatggccg      1560
     gttgaagtct ggaatgaacc caatatagct ttttgggcgg gaacaatgga agagtatttc      1620
     aaactgtatg agtattccgc aaagcgtgaa agggttgatc cgaataaagt cggcgggccg      1680
     gtgatatgtg gtatagaaac cgaaaaatgg ctgcgtgcct tttttgagca ttgcatagaa      1740
     aataatttgc ctctggattt cgtaagccgg cattgttata ctgtgggaaa gccggtgcgc      1800
     aaggggcagt ttatttatca tgaaatattc agtccaacgt atatgataga ggaattaaag      1860
     gaaacaagaa aaataatggc cgattatccg cagattgcta atctgccgct gcatataacc      1920
     gaatttaaca gttcttacgt tcctgtatgc ccggtgcatg acacaacttt ccaggctgca      1980
     tatattgcga ggattctcag tgaggccggt gaatatgccg attcctattc ttactggaca      2040
     ttcagtgatg tttttgagga atatgacgtt ccaagatcgg cgtttcacgg aggttttggc      2100
     cttgtggcgc tgaattcaat taaaaaaccg gtatttcata cttttgaatt ttttgccaat      2160
     gcgggcaagg aactgcttta ccgcgatgag aatctgattg ttacaaggga tgacaaaaga      2220
     tatgttataa taggctggaa ctaccatgac acaagaaagg gtgagccggg cccggataaa      2280
     gagtatgtac tctcaattcc ctccatcggg cagcaggcaa tactgattaa aaagcaggtg      2340
     ggagggaatt atgccaatcc gctgcagaca tggagcaatc tgggaaagcc acggacgctg      2400
     aataaggaac aaagaaaaat actgatggcg gcgtctgaac cgcttcagac agatgtgaaa      2460
     ctgtttgacg aaaagggttt ttataaagtg aaactgacca ttcagtgcaa tcatctgtat      2520
     atgctggaaa ttctgcctgt taaggatttt accgatacat atgacggttt tgaaccggat      2580
     gaattttttg gacttgaata aaaataaaaa atcagtctct ggtatacacg accgagaggg      2640
     gacttgttct ggcaaaggac gcgttccctt tttttctgta attacttggt gaaggttttg      2700
     caatatttat tgaaagctct gttgaactgg gaaaaacttg aaaaaccgca ttgagtggca      2760
     atgtcggtta tttttttgtc tgtgaacaga agaagctgtt gggcgtttct tatccttgtc      2820
     atctgaatgt aatcggtcag ggaaaaacct gtaacttcct tgaataaatg ggacaaataa      2880
     tacttgctga ggaaaaactt gtttgcaagt acgctgaggg ataaatcctc attatagtga      2940
     ttgtgaatat atgcggtgat tgaataaatt tttgaagcag gagtattaag ggtttcaggc      3000
     atataaatgt tttcattccg gtgattgtat attgtgcata aaagatctat gaacctgcag      3060
     tgaatggata aatcccgaac cggggttttc ggatttggat attataaaaa tgtcgttcag      3120
     agtatctata attttatcct tgttattctg ctcaaaacgg taaatgggca aaggcgcttc      3180
     aaaaatactc agcagttcgt ttaaattatc ctgcaatatc cctgtctgcg caggtatgtt      3240
     gaactggatt atcagccttt ttttcggcgg acctttcgga tactcggatt tgtgaaggct      3300
     ataaggtttc aggcatacaa aatccaaaaa ttcaattctg taaaggttac cttcgattat      3360
     gtggttggca tgatcatcga gtaaaacgtg tatttcgtaa aaattatgaa aatgctggaa      3420
//


  
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