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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ507152; SV 1; linear; genomic DNA; STD; MAM; 857 BP.
XX
AC   AJ507152;
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DT   18-SEP-2002 (Rel. 73, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 3)
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DE   Sus scrofa partial GYS gene for glycogen synthase, exons 13-15
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KW   glycogen synthase; GYS gene.
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OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus.
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RN   [1]
RP   1-857
RA   te Pas M.F.;
RT   ;
RL   Submitted (27-AUG-2002) to the EMBL/GenBank/DDBJ databases.
RL   te Pas M.F., Animal Sciences, ID-Lelystad, P.O. Box 65, 8200 AB Lelystad,
RL   NETHERLANDS.
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RN   [2]
RX   DOI; 10.1046/j.1365-2052.2003.00965_9.x
RX   PUBMED; 12648107.
RA   te Pas M.F., Leenhouwers J.I., Knol E.F., Booij M., Priem J.,
RA   van der Lende T.;
RT   "Marker polymorphisms in the porcine genes for muscle glycogen synthase
RT   (GYS1) and muscle glycogen phosphorylase (PYGM)";
RL   Anim. Genet. 34(2):157-158(2003).
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FH   Key             Location/Qualifiers
FH
FT   source          1..857
FT                   /organism="Sus scrofa"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9823"
FT   CDS             join(<1..101,231..401,702..>857)
FT                   /codon_start=2
FT                   /gene="GYS"
FT                   /product="glycogen synthase"
FT                   /note="expressed in muscle"
FT                   /db_xref="GOA:Q8HYV0"
FT                   /db_xref="InterPro:IPR008631"
FT                   /db_xref="UniProtKB/TrEMBL:Q8HYV0"
FT                   /protein_id="CAD47844.1"
FT                   /translation="QYLPTSPASAAXWRNTSQTPRLTVSARTESWDSLTGIYILDRRFR
FT                   SLDDSCSQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKYLGRALSVHSSCIKVVAS
FT                   VFPRPKSAPAGADLTPAFXMPALLSPCPQVLHVCTPQA"
FT   exon            <1..101
FT                   /gene="GYS"
FT                   /number=13
FT   intron          102..230
FT                   /gene="GYS"
FT                   /number=13
FT   exon            231..401
FT                   /gene="GYS"
FT                   /number=14
FT   intron          402..701
FT                   /gene="GYS"
FT                   /number=14
FT   variation       418
FT                   /gene="GYS"
FT                   /replace="a"
FT                   /note="SNP"
FT   exon            702..>857
FT                   /gene="GYS"
FT                   /number=15
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SQ   Sequence 857 BP; 165 A; 252 C; 226 G; 209 T; 5 other;
     ccagtatctc cccacctctc cggcttcggc tgcttmatgg aggaacacat cgcagacccc        60
     tcggcttacg gtmagcgccc ggactgagag ctgggactct tggatcatga gggaggaggg       120
     gagggggtgg actcctgact cccagtggga ggaggcagtc ttggtgccgc tgagtctcag       180
     agtgaatgga ggtttcccca gtctgttttc tgagaccccc gtcctggccc tgacaggcat       240
     ctacattctg gaccggcggt tccgcagcct ggatgattcc tgctcgcagc tcacctcctt       300
     cctctacagc ttctgccagc agagtcggcg gcagcgcatt atccagcgga accgcaccga       360
     gcgcctctcc gaccttctgg actggaaata cctaggccgg gtataactcc cttccctgtc       420
     ctttgctgct gaatcagccg cttctggctc tgggtctcgg ctttcgcagt actaaaagcc       480
     cggtctcttc ctaattgtaa tggttgcggc ccctttaaga aattaatcca cattggctgg       540
     aagaccctct ggggtggttc tctatttgca taggagtttg gaccgagaga ttaccrtgat       600
     tgaagagttc tgcgttccta gtgtgtggct cagaaatttc ttgcagcagc tctgctcatc       660
     tacataaggg ggtggagcca gaaagaggcc aattgaaaga ccgctcagtg tgcactcatc       720
     atgcataaaa gttgtagcca gcgttttccc sagacccaaa tctgctccag cgggggcaga       780
     tttgactcca gccttctyga tgcccgctct cctctctccc tgcccccaag tactacatgt       840
     ctgcacgcca caggcat                                                      857
//
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