EBI Dbfetch

ID   AJ489171; SV 1; linear; genomic DNA; STD; PRO; 1860 BP.
XX
AC   AJ489171;
XX
DT   05-JUL-2002 (Rel. 72, Created)
DT   20-AUG-2004 (Rel. 80, Last updated, Version 2)
XX
DE   Flavobacterium sp. 92 cdase gene for cyclomaltodextrinase
XX
KW   cdase gene; cyclomaltodextrinase.
XX
OS   Flavobacterium sp. 92
OC   Bacteria; Bacteroidetes; Flavobacteria; Flavobacteriales;
OC   Flavobacteriaceae; Flavobacterium.
XX
RN   [1]
RP   1-1860
RA   Schulz G.E.;
RT   ;
RL   Submitted (04-JUN-2002) to the EMBL/GenBank/DDBJ databases.
RL   Schulz G.E., Institut fuer Org. Chemie und Biochemie,
RL   Albert-Ludwigs-Universitaet Freiburg, Albertstr. 21, 79104 Freiburg,
RL   GERMANY.
XX
RN   [2]
RX   DOI; 10.1046/j.1432-1033.2003.03603.x
RX   PUBMED; 12752453.
RA   Fritzsche H.B., Schwede T., Schulz G.E.;
RT   "Covalent and three-dimensional structure of the cyclodextrinase from
RT   Flavobacterium sp. no. 92";
RL   Eur. J. Biochem. 270(10):2332-2341(2003).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1860
FT                   /organism="Flavobacterium sp. 92"
FT                   /strain="92"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:197856"
FT   CDS             1..1860
FT                   /transl_table=11
FT                   /gene="cdase"
FT                   /product="cyclomaltodextrinase"
FT                   /EC_number="3.2.1.54"
FT                   /db_xref="GOA:Q8KKG0"
FT                   /db_xref="InterPro:IPR006047"
FT                   /db_xref="InterPro:IPR006589"
FT                   /db_xref="InterPro:IPR013780"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR014756"
FT                   /db_xref="InterPro:IPR015171"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="InterPro:IPR019492"
FT                   /db_xref="PDB:1H3G"
FT                   /db_xref="PDB:3EDD"
FT                   /db_xref="PDB:3EDE"
FT                   /db_xref="PDB:3EDF"
FT                   /db_xref="PDB:3EDJ"
FT                   /db_xref="PDB:3EDK"
FT                   /db_xref="UniProtKB/TrEMBL:Q8KKG0"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAD32957.1"
FT                   /translation="MRRSFATLFLPTWPAPLPAAPTAIEHMEPPFWWAGMQHKGLQLMV
FT                   HGRDIGRMEAALDYPGVRLVSTTRVPNANYLFVDLEIGPEAQPGSFDIVFKGDGRSERY
FT                   RYRLLAREQGSAQRQGFGPGDAIYQIMPDRFANGDPSNDNVAGMREQADRRHGGGRHGG
FT                   DIRGTIDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRL
FT                   STEARKRGMGLIQDVVLSHIGKHHWWMKDLPTPDWINYGGKFVPTQHHRVAVQDPYAAQ
FT                   ADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAGLSGLRIDTYGYSDGAFLT
FT                   EYTRRLMAEYPRLNMVGEEWSTRVPVVARWQRGKANFDGYTSHLPSLMDFPLVDAMRNA
FT                   LSKTGEENGLNEVYETLSLDYLYPEPQNLVLFGGNHDMARMFSAAGEDFDRWRMNLVFL
FT                   MTMPRIPQFYSGDEILMTSTVKGRDDASYRRDFPGGWAGDKANAFSGAGLTSQQRAAQD
FT                   LVRKLANWRKNQPVIHNGRLMHFGPEENTWVYFRYNKDKRIMVAMNNNDKPMTLPTARF
FT                   QEMLKGAPSGVDFLSGKTVGLGRELRLAPKSVVVIELPGLPEA"
FT   sig_peptide     1..54
FT                   /gene="cdase"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT   mat_peptide     55..1857
FT                   /gene="cdase"
FT                   /product="cyclomaltodextrinase"
FT                   /function="hydrolysis of cyclodextrins and linear
FT                   malto-oligosaccharides"
FT                   /EC_number="3.2.1.54"
FT                   /note="location: periplasmic space"
XX
SQ   Sequence 1860 BP; 357 A; 628 C; 587 G; 288 T; 0 other;
     atgagacgtt cttttgcaac acttttcctt ccgacgtggc cggcgccttt gccggctgcg        60
     ccgactgcta tcgaacacat ggaaccgccc ttctggtggg ccggcatgca gcacaagggc       120
     ctgcagctga tggtccacgg cagggacatc ggccgcatgg aagcggcgct cgactatccg       180
     ggcgtgcgcc tggtctcgac cacccgggtg ccgaatgcga actacctgtt cgtcgacctc       240
     gagatcggcc ccgaggcgca gccgggcagc ttcgacatcg tgttcaaggg cgatggccgc       300
     agcgaacgct atcgctaccg gctgctggcg cgcgaacagg gctcggcgca gcgccagggc       360
     ttcgggccgg gcgacgccat ctaccagatc atgccggacc gcttcgccaa cggtgacccg       420
     tcgaacgaca acgtggccgg gatgcgtgag caggccgacc gcaggcatgg cggcgggcgc       480
     cacggcggcg acatccgggg caccatcgac cacctcgact acatcgccgg cctgggcttt       540
     acccagttgt ggccgacgcc gctggtcgag aacgacgccg cggcgtactc gtatcacggc       600
     tacgccgcca ccgaccatta caggatcgac ccgcgctacg gcagcaacga ggacttcgtg       660
     cgcttgtcga ccgaggccag gaagcgcggc atgggcctga tccaggacgt ggtgctgtcc       720
     cacatcggca agcaccactg gtggatgaag gacttgccga cgccggactg gatcaactac       780
     ggcggcaagt tcgttccgac ccagcaccac cgcgtcgccg tgcaggaccc gtatgccgcg       840
     caggccgaca gcgagaactt caccaagggc tggttcgtcg aaggcatgcc ggacctgaac       900
     cagaccaatc cgctggtcgc caactacctc atccagaaca acatctggtg gatcgagtac       960
     gccggcctgt ccggcctgcg catcgacacc tatggttatt ccgacggcgc cttcctgacc      1020
     gagtacaccc ggcgcctgat ggccgagtac ccgcgcctga acatggtggg cgaggaatgg      1080
     agcacgcgcg ttcccgtcgt ggcgcgctgg cagcgcggaa aggccaactt cgacggctac      1140
     accagccacc tgcccagcct gatggatttt ccattggtcg atgcgatgcg caatgcgctc      1200
     tcgaagaccg gcgaggaaaa cggcctgaac gaggtctacg agacgctctc gctcgactac      1260
     ctgtatccgg agccgcagaa cctcgtgctc ttcggcggca accacgacat ggcgcgcatg      1320
     ttcagcgccg cgggcgagga cttcgaccgc tggcgcatga acctggtgtt cctgatgacg      1380
     atgccgcgca tcccgcagtt ctacagcggc gacgagatcc tgatgaccag cacggtgaaa      1440
     ggccgcgacg acgccagcta ccgccgcgac tttcccggcg gctgggcggg cgacaaggcg      1500
     aatgccttca gcggcgccgg cctcaccagc cagcagcgcg cggcgcagga cctggtgcgc      1560
     aagcttgcca actggcgcaa gaaccagccg gtcatccaca acgggcgcct gatgcacttc      1620
     ggccccgagg agaacacctg ggtctacttc cgatataaca aggacaaacg catcatggtc      1680
     gccatgaaca acaacgataa accgatgacc ctgcccaccg cgcgcttcca ggagatgctc      1740
     aagggcgccc cttccggcgt cgatttcctg agcgggaaga cggtcggcct gggccgcgaa      1800
     ctgcgcctgg cgccgaagtc ggtcgtcgtg atcgaacttc caggactgcc ggaggcatga      1860
//