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EBI DbfetchID AJ438339; SV 1; linear; genomic DNA; STD; PRO; 2420 BP. XX AC AJ438339; XX DT 07-MAR-2002 (Rel. 71, Created) DT 24-FEB-2003 (Rel. 74, Last updated, Version 2) XX DE Erwinia chrysanthemi rhiE gene for putative rhamnogalacturonase XX KW rhamnogalacturonase; rhiE gene. XX OS Erwinia chrysanthemi OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Dickeya. XX RN [1] RP 1-2420 RA Condemine G.; RT ; RL Submitted (07-MAR-2002) to the EMBL/GenBank/DDBJ databases. RL Condemine G., Unite Microbiologie et Genetique, cnrs umr5122, 10 rue RL raphael dubois, 69622 villeurbanne, FRANCE. XX RN [2] RX DOI; 10.1128/JB.185.5.1642-1649.2003 RX PUBMED; 12591882. RA Laatu M., Condemine G.; RT "Rhamnogalacturonate lyase RhiE is secreted by the out system in Erwinia RT chrysanthemi"; RL J. Bacteriol. 185(5):1642-1649(2003). XX FH Key Location/Qualifiers FH FT source 1..2420 FT /organism="Erwinia chrysanthemi" FT /strain="3937" FT /mol_type="genomic DNA" FT /db_xref="taxon:556" FT CDS 426..2162 FT /transl_table=11 FT /gene="rhiE" FT /product="putative rhamnogalacturonase" FT /function="putative role in rhamnogalacturonan degradation" FT /db_xref="GOA:Q8RJP2" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR010325" FT /db_xref="InterPro:IPR011013" FT /db_xref="InterPro:IPR013784" FT /db_xref="UniProtKB/Swiss-Prot:Q8RJP2" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAD27359.1" FT /translation="MHMNKPLQAWRTPLLTLIFVLPLTATGAVKLTLDGMNSTLDNGLL FT KVRFGADGSAKEVWKGGTNLISRLSGAARDPDKNRSFYLDYYSGGVNEFVPERLEVIKQ FT TPDQVHLAYIDDQNGKLRLEYHLIMTRDVSGLYSYVVAANTGSAPVTVSELRNVYRFDA FT TRLDTLFNSIRRGTPLLYDELEQLPKVQDETWRLPDGSVYSKYDFAGYQRESRYWGVMG FT NGYGAWMVPASGEYYSGDALKQELLVHQDAIILNYLTGSHFGTPDMVAQPGFEKLYGPW FT LLYINQGNDRELVADVSRRAEHERASWPYRWLDDARYPRQRATVSGRLRTEAPHATVVL FT NSSAENFDIQTTGYLFSARTNRDGRFSLSNVPPGEYRLSAYADGGTQIGLLAQQTVRVE FT GKKTRLGQIDARQPAPLAWAIGQADRRADEFRFGDKPRQYRWQTEVPADLTFEIGKSRE FT RKDWYYAQTQPGSWHILFNTRTPEQPYTLNIAIAAASNNGMTTPASSPQLAVKLNGQLL FT TTLKYDNDKSIYRGAMQSGRYHEAHIPLPAGALQQGGNRITLELLGGMVMYDAITLTET FT PQ" FT sig_peptide 426..506 FT /gene="rhiE" FT /experiment="experimental evidence, no additional details FT recorded" XX SQ Sequence 2420 BP; 559 A; 736 C; 677 G; 448 T; 0 other; cttgatggcc agcgccagta atcccagcga tagccccaga taaaccggag ccagcagcca 60 ccgtgcagcg tacatcgtat tttccagaaa acgttcccat agcgcctatc aggtacaggt 120 ttgagaggaa tgcataatag cgaaaaaccg cagcggagtg ttattcaatt acttatcgat 180 ataatttgtt gattttaaaa aaaataacct gattttcacc gaattatacc gccaatagcc 240 caagtgcagc cccacaacat ccgaatcgac aaatatgatc ccgatcgcgc cgatcttcgc 300 gctattgcca ccttcgcccc gcggatgacc atccaacaaa ggagcgccat tcatcaccgc 360 gttaggctgt gtactgctgt attcctctcc ctacaacgca ccacacatca aaagacaaat 420 ggacgatgca catgaataaa cctctgcagg catggcgtac cccgttgttg acactgatat 480 tcgtgctgcc gctgacggcg acaggcgcgg tgaaactgac gctcgacggc atgaacagta 540 cgctggacaa cgggctgctg aaagtccgct ttggcgcgga cggcagcgcg aaggaagtgt 600 ggaaaggcgg caccaacctg atttcccgcc tctccggcgc ggcgcgcgat ccggataaaa 660 accgcagttt ttacctcgat tactactccg gcggcgtcaa cgaattcgtg ccggaacgac 720 tggaggtgat caaacagacg ccggatcaag tccatctggc ctatatcgac gaccagaacg 780 gcaaactgcg gctggaatat cacctgatca tgacccgcga cgtcagcggc ctttacagtt 840 atgtggtggc cgccaacacc ggttcagcgc cggtgacggt cagcgaactg cgcaacgttt 900 accgtttcga cgccacccgg ctggacacgt tgttcaacag catccggcgc ggcacgccgc 960 tactgtacga cgaactggag cagttgccga aagtgcagga tgaaacctgg cggttgcctg 1020 acggtagcgt ctactccaaa tacgactttg ccggttatca acgcgaaagc cgctactggg 1080 gggtgatggg caacggttac ggcgcctgga tggtgcccgc cagcggcgag tattactcag 1140 gcgacgcgct gaaacaggaa ctgctggtgc atcaggacgc gattatcctg aactatctta 1200 ccggttctca cttcggcacc ccggatatgg tggcgcagcc gggttttgag aaactctacg 1260 gtccgtggct gctgtacatc aatcagggca acgaccggga actggtggcg gacgtcagcc 1320 gtcgggccga gcatgaacgc gccagttggc cctaccgctg gctggacgat gcgcgctatc 1380 cacgtcaacg cgccaccgtc agcggccgtc tgcgcaccga ggcgcctcac gccacggtgg 1440 tgctgaacag cagcgcggaa aactttgata ttcagactac cggttatctg ttcagcgccc 1500 gcaccaaccg cgacggccgt ttcagcctga gcaatgtgcc gccgggtgaa taccggctgt 1560 cggcctacgc cgatggcggc acgcaaatcg gcctgctggc gcaacaaacc gtgcgggtag 1620 aaggcaagaa aacccgactc ggccagattg acgcgcggca acctgcgccg ctggcatggg 1680 ccatcggtca ggccgaccgc cgggccgacg agttccgctt cggcgacaag ccacgtcagt 1740 atcgctggca aaccgaggtg ccggccgacc tgaccttcga gatcggcaaa agccgcgaac 1800 gtaaggactg gtactacgcc cagactcaac cgggtagctg gcatatcctg ttcaacaccc 1860 gcacgcccga gcagccttac accctgaata tcgctatcgc cgccgccagc aacaacggca 1920 tgaccacgcc ggccagttcg ccgcaactgg cggtgaaact caacggccag ttgctgacca 1980 cgctgaagta cgacaacgat aagtccatct accggggcgc catgcaaagc ggtcgttacc 2040 atgaagcgca tattccgctg cccgcgggcg cactgcaaca gggcggcaac cgcatcacgc 2100 tggaactgct cggcggcatg gtgatgtatg acgccattac gctgacggaa acgccgcaat 2160 aacccgcagc gctcatcacg cctcgttccg cgtcggcatc aggtcggcgc ggaacgcccc 2220 gtctttcttt aataacgata ttcatatcca tgcgggcggc tgtcggatca agatcaagcc 2280 agcgacgtga taggtgaccg gagattaatt tgactggaga ttgatttggc tggcggtaaa 2340 tagccccaga aacgccaacg ctgcgtcaaa gcgcagcgtc gtcggcgtgt gtcatcgagc 2400 ttggcactgg ccgtcgtttt 2420 // |
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