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EBI DbfetchID AJ431666; SV 1; linear; genomic DNA; STD; PRO; 4965 BP. XX AC AJ431666; XX DT 23-FEB-2002 (Rel. 70, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Halomonas eurihalina dapB gene (partial), carA gene and carB gene, strain DE F2-7 XX KW carA gene; carB gene; carbamoylphosphate synthetase large subunit; KW carbamoylphosphate synthetase small subunit; dapB gene; KW dihydrodipicolinate reductase. XX OS Halomonas eurihalina OC Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; OC Halomonadaceae; Halomonas. XX RN [1] RP 1-4965 RA Llamas I.; RT ; RL Submitted (21-FEB-2002) to the EMBL/GenBank/DDBJ databases. RL Llamas I., Microbiology, Faculty of Pharmacy, Campus Universitario Cartuja RL s/n, 18071, Granada, SPAIN. XX RN [2] RX PUBMED; 12768451. RA Llamas I., Suarez A., Quesada E., Bejar V., del Moral A.; RT "Identification and characterization of the carAB genes responsible for RT encoding carbamoylphosphate synthetase in Halomonas eurihalina"; RL Extremophiles 7(3):205-211(2003). XX FH Key Location/Qualifiers FH FT source 1..4965 FT /organism="Halomonas eurihalina" FT /strain="F2-7" FT /mol_type="genomic DNA" FT /country="Spain:Alicante" FT /isolation_source="saline soil" FT /db_xref="taxon:42566" FT CDS <1..246 FT /codon_start=1 FT /transl_table=11 FT /gene="dapB" FT /product="dihydrodipicolinate reductase" FT /db_xref="GOA:Q8RSS5" FT /db_xref="HSSP:1DRW" FT /db_xref="InterPro:IPR000846" FT /db_xref="InterPro:IPR011770" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q8RSS5" FT /protein_id="CAD24313.1" FT /translation="VFERVGQCGPRSDKKXGFATVXAGDIVGEHTVMFXAEGERIEXTH FT KASSRMTFXKGXVRAAXWLSXQPAGRYXMQDVIGLD" FT promoter 247..531 FT /gene="carA" FT /note="putative promoter region" FT RBS 520..525 FT /gene="carA" FT CDS 532..1677 FT /transl_table=11 FT /codon=(seq:"ttg",aa:Met) FT /gene="carA" FT /product="carbamoylphosphate synthetase small subunit" FT /db_xref="GOA:Q8RSS4" FT /db_xref="InterPro:IPR000991" FT /db_xref="InterPro:IPR001317" FT /db_xref="InterPro:IPR002474" FT /db_xref="InterPro:IPR006274" FT /db_xref="InterPro:IPR011702" FT /db_xref="InterPro:IPR017926" FT /db_xref="UniProtKB/Swiss-Prot:Q8RSS4" FT /protein_id="CAD24314.1" FT /translation="MSKPAILALEDGSVFHGTAIGADGQTSGEVVFNTAMTGYQEILTD FT PSYSRQIVTLTYPHIGNTGVNSEDVESSSIAAAGLVIRDLPLLASSFRCEQSMSDYLAQ FT QNVLGIADMHTRRLTRLLRDKGSQNGAILAGPDAEGEDAEARALEAARAFPGLKGMDLA FT KVVSCAEPYEWSEGEWTLGSGYADVSQGDRPYHVVAYDYGMKRNILRMLAARGCRLTVV FT PAQTPAEEVLAMNPDGIFLSNGPGDPEPCDYAISAIQAFLETEIPVFGICLGHQMLALA FT SGAQTVKMNHGHHGANHPVQDLDSGRVMITSQNHGFAVEESTLPDNLRAIHRSLFDGTL FT QGIERTDRPAFSFQGHPEASPGPRDVAPMFDRFVEMMRHRR" FT RBS 1727..1730 FT /gene="carB" FT CDS 1735..4965 FT /transl_table=11 FT /gene="carB" FT /product="carbamoylphosphate synthetase large subunit" FT /db_xref="GOA:Q8RSS3" FT /db_xref="InterPro:IPR005479" FT /db_xref="InterPro:IPR005480" FT /db_xref="InterPro:IPR005481" FT /db_xref="InterPro:IPR005483" FT /db_xref="InterPro:IPR006275" FT /db_xref="InterPro:IPR011607" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR016185" FT /db_xref="UniProtKB/Swiss-Prot:Q8RSS3" FT /protein_id="CAD24315.1" FT /translation="MPKRTDIQSILIIGAGPIVIGQACEFDYSGAQACKALREEGFRVI FT LVNSNPATIMTDPVMADATYIEPITWQAVEKIIEAERPDAVLPTMGGQTALNCALDLDK FT HGVLEKFGVEMIGANADAINMAEDRDLFDQAMKRIGLECPKAKVAHSMDEAWQIQSELG FT FPVIIRPSYTMGGSGGGVAYNKEEFEEICTRGFELSNNHELLIDESLLGWKEYEMEVVR FT DKNDNCIIVCAIENFDPMGVHTGDSITVAPAQTLTDKEYQNMRDASLAVLREIGVETGG FT SNVQFGVDPDTGRVVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDIT FT GGRTPASFEPSIDYVVTKIPRFTFEKFPQANDRLTTQMKSVGEVMAIGRTFQESLQKAL FT RGLETGNDGLDPKVTRFNDDGMAHIKGELQVAGAERIFYVADAMRAGLSVEELFRLTNI FT DRWFLVQLEDLVRTEAELAKRSLSELTPRELFALKRKGFSDARLAGLLGVAEKDFRRTR FT QAAGIRPVYKRVDTCAAEFATDTAYMYSSYEEECEAEVSDRPKIMVLGGGPNRIGQGIE FT FDYCCVHAALAMRDDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIADKEKPA FT GVIVQFGGQTPLKLARELEAAGVPIIGTTPDAIDRAEDRERFQHMVDKLGLKQPANATA FT RSXEEAFAKAEAIGYPXVVRPSYVLGGXAMEIVYDASELENYMTHAVKVSNDSPVLLDH FT FLNCAIEVDIDAVSDGHQVVIGGIMQHIEQAGVHSGDSACALPPYSLPAEVQDEMRDQV FT KRMAVELGVKGLMNVQLAWQDGEIYVIEVNPRASRTVPFVSKCVGTSLAQVAARCMAGI FT SLAEQGFVEEIVPHFYSVKEAVFPFAKFPGVDPILSPEMKSTGEVMGSGDTFAEAFYKA FT QLGAGEAIPALEGERKAFLSVRDPDKQGVIDVARSLLGLGFTLCATRGTASALQQAGLP FT VDVVNKVYEGRPHXVDLLKNDXVAYIVNTTEGRQAINDSSVIRRTALARKVPYATTLAG FT ANAVCLALEYGNAITVRRLQELHAGVSQ" XX SQ Sequence 4965 BP; 922 A; 1530 C; 1559 G; 939 T; 15 other; gtcttcgagc gtgtcgggca gtgcggcccg cgcagcgaca agaagancgg tttcgccaca 60 gtgngggccg gtgacatcgt cggtgagcat accgtgatgt tcnccgccga gggcgagcgc 120 atcgagntta cccacaaggc ctccagccgc atgaccttcn ccaagggcnc cgtgcgggcg 180 gcacnctggt tgtccgncca gccggcaggg cgttatnaca tgcaggacgt catcgggctg 240 gattgaaggg tagccgaacg gcgtcggatg ctttagaatc ccacaaattt tggccgggcg 300 ccggctatcg ccgcgcaaac gcttgtcgcg tcggcccagc attccgagcg aatgacaaca 360 agcgggatga aaccggtctt tatcgtcggg tttcgtcccg cttttttgcg ggtcagccag 420 gcgagaatcg gaggctgtcg ggctcaccat ggctgtcgag cgccattcga aaagcattcc 480 ttgacgagct gtctcttata gctgtctgta aacatatggg aggacgttgc attgagcaaa 540 cccgcgatac tggccctgga agatggcagt gtgtttcatg gcaccgccat tggcgccgat 600 gggcaaacca gcggtgaggt ggtgttcaat acggccatga caggctacca ggagatcctc 660 accgatccgt cctacagccg tcagatcgtc accctgacct atccgcacat cggtaatacc 720 ggcgtcaaca gcgaggatgt ggagtcttcg agcattgctg ccgccgggct ggtgattcgc 780 gacctgccgc tgctggccag cagttttcgt tgcgagcagt cgttgtcaga ttatctggcg 840 cagcagaacg tgctgggcat cgccgatatg catacccgtc ggctgactcg cctgctgcgc 900 gacaagggct cccagaatgg cgccatcctg gccggccccg acgccgaggg cgaggatgcc 960 gaggcgcgag ccctggaagc ggccagggcc tttcccggcc tgaagggcat ggatctggcc 1020 aaggtcgtct cctgcgccga gccctatgag tggagcgaag gcgagtggac gctgggcagc 1080 gggtatgccg atgtctctca gggcgatcgg ccctatcacg tcgtcgccta cgattacggg 1140 atgaagcgca acatcctgcg catgctggcc gctcggggct gccggctgac cgtggtgccg 1200 gcccagacgc cggccgagga agtgctggcg atgaatccgg atggcatctt cctttccaac 1260 ggcccgggcg atcccgagcc ctgcgactac gccatcagcg ccatccaggc gtttctggag 1320 accgagattc cggtctttgg tatttgcctc ggccaccagt tgctggcgct ggccagtggc 1380 gcgcaaacgg tgaagatgaa ccatggccac catggcgcca accacccggt gcaggatctc 1440 gatagcggcc gggtgatgat caccagccag aaccatggct tcgccgtcga ggaatccact 1500 ctgcccgata acctgcgcgc cattcatcgt tccctgttcg atggcaccct gcagggcatc 1560 gagcgcaccg accgcccggc gttcagcttc cagggacacc ccgaggcgag ccccggcccc 1620 agggacgtag ctccgttgtt cgaccgcttc gtcgagatga tgcggcaccg gcgctgacgc 1680 ccgtacacga tcgatcgccg cccctcgtct gccactattc ttgcgggaag caccatgccc 1740 aaacgtaccg acatccagag catcctgatc atcggcgcag gccccatcgt catcggccag 1800 gcctgtgaat tcgactattc cggcgcccag gcctgcaagg ccctgcgcga ggaaggcttc 1860 cgggtcatct tggtcaactc caatccggcg accatcatga ccgacccggt gatggccgac 1920 gccacctata tcgagccgat cacctggcag gccgtggaga agatcatcga ggccgagcgc 1980 cccgacgccg tgctgccgac catgggtggc cagacggccc tcaactgtgc cctggacctg 2040 gacaagcacg gcgtactcga gaagttcggt gtggaaatga tcggtgccaa cgccgacgcc 2100 atcaatatgg ccgaagaccg tgacctcttc gatcaggcga tgaagcgcat cggcctggag 2160 tgccccaagg ctaaggtcgc ccacagcatg gacgaggcct ggcagatcca gagcgagctg 2220 ggctttccgg tcatcattcg cccctcctac accatggggg gctccggcgg cggtgtggcc 2280 tacaacaagg aagagttcga ggaaatctgc actcggggtt tcgagctctc caacaaccat 2340 gagttgttga tcgacgagtc gctgctgggc tggaaggaat acgagatgga ggtcgttcgc 2400 gacaagaacg acaactgtat catcgtctgt gccatcgaga acttcgatcc catgggcgtg 2460 cacaccgggg attccatcac cgtggcaccc gcccagacgc tgacggacaa ggaataccag 2520 aacatgcgcg acgcctccct ggcggtgttg cgtgagatcg gcgtcgagac ggggggctcc 2580 aacgttcagt ttggcgtcga ccctgacacc gggcgcgtgg tggtcatcga gatgaacccg 2640 cgggtgagtc gttcctcggc gctggcctcc aaggccaccg gcttccccat cgccaagatc 2700 gccgccaagc tggccgtcgg ctataccctg gatgagctct cgaacgacat taccggcggg 2760 cgcactccgg cctcgttcga gccatccatc gattacgtgg ttaccaagat cccgcgtttc 2820 actttcgaga aattccctca ggccaatgac cgcctgacca ctcagatgaa gtcggtcggc 2880 gaagtgatgg ccatcgggcg caccttccag gaatccctgc agaaggcgct gcgtggcctg 2940 gaaaccggta atgatggcct tgatccgaaa gtcacgcgct tcaatgacga tggcatggcg 3000 catatcaagg gcgagctgca ggtggccggt gccgagcgca tcttctatgt ggccgatgcc 3060 atgcgcgcgg gcttgagtgt cgaggaactg ttccgcctga ccaatatcga ccgttggttc 3120 ctggttcagc tcgaagacct ggtgcgtacc gaggccgagc tggccaagcg ttcgctctcc 3180 gagctgacac ctcgcgagct gttcgctctc aagcgcaagg gattctccga cgcgcggctg 3240 gctgggctgc ttggcgttgc agagaaggat ttccgccgga cccgtcaggc agccggtatc 3300 cgccccgtct acaagcgggt cgacacctgt gccgccgagt tcgccaccga cacggcctac 3360 atgtactcct cctatgagga agagtgcgag gcggaggttt ccgatcggcc caagatcatg 3420 gtgctgggcg gcggccccaa ccgtatcggt cagggcatcg agttcgacta ctgctgtgtg 3480 catgccgcgc tcgccatgcg tgacgatggc tatgaaacca tcatggtcaa ctgtaacccg 3540 gagaccgtct ccaccgacta tgacacctcg gatcggctct acttcgagcc ggtgacgctc 3600 gaggacgtgc tggagatcgc cgacaaggag aagccggccg gggtgatcgt gcagttcggt 3660 ggccagacgc cactcaagct ggcgcgtgag ctcgaggccg ccggggtgcc gatcatcggc 3720 actacgccgg atgccatcga tcgggccgag gatcgcgagc gtttccagca tatggtcgac 3780 aagctggggc tnaagcagcc ggccaacgcc actgcgcgta gcttngagga ggccttcgcc 3840 aaggccgagg ccatcggtta cccgntggtg gtgcgcccct cctatgtgct gggtggtnga 3900 gccatggaga tcgtctacga cgcttccgag ctggagaact acatgaccca tgcggtcaag 3960 gtctccaatg actcgccggt gctgctcgac cacttcctca attgcgccat cgaggtcgac 4020 attgacgccg tgtccgacgg tcatcaggtg gtgatcggtg gcatcatgca gcacatcgag 4080 caggccgggg tgcactcggg cgattccgcc tgtgccttgc cgccgtactc gttgccggcc 4140 gaggtccagg atgagatgcg cgatcaggtc aagcgcatgg ctgtggagct cggggtcaag 4200 ggcctgatga acgtgcagct ggcctggcag gatggcgaga tctacgtcat cgaggtcaac 4260 cctcgtgcct cgcgtaccgt gcctttcgtc tccaagtgcg tcggcacctc gctggcgcag 4320 gtcgcggcgc gttgcatggc cggtatttcg cttgctgagc agggtttcgt cgaggagatc 4380 gtgccgcact tctacagcgt caaggaagcg gtgttcccgt tcgccaagtt ccccggtgtc 4440 gacccgattc tctcgccgga aatgaagtcc accggcgagg tgatgggcag cggcgatacc 4500 tttgccgaag ccttctacaa ggcgcagttg ggcgctggcg aggcgattcc ggccctggag 4560 ggcgagcgca aggcattcct ctcggtgcgt gaccccgaca agcagggtgt tatcgatgtg 4620 gcccgatctt tgttaggatt agggttcaca ctgtgcgcga cgcgtggcac ggcatcggcc 4680 ctgcaacaag ccggcctgcc cgtggacgtc gtcaacaagg tttatgaagg ccgtcctcat 4740 atngtcgatc tgctcaagaa cgacnaggtc gcctatatcg tcaacactac cgagggccgc 4800 caggccatta atgattcctc ggtgatccgc cgcactgcac tcgctcgcaa ggttccctat 4860 gccaccacac tggcgggggc caatgccgtt tgcttggcac tcgaatatgg taatgccatc 4920 accgtgcggc ggttacagga attgcatgca ggagtcagtc aatga 4965 // |
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