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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ420777; SV 1; linear; genomic DNA; STD; PRO; 1448 BP.
XX
AC   AJ420777;
XX
DT   29-NOV-2001 (Rel. 69, Created)
DT   13-JAN-2003 (Rel. 74, Last updated, Version 2)
XX
DE   Burkholderia cepacia waaA gene for Kdo transferase
XX
KW   kdo transferase; waaA gene.
XX
OS   Burkholderia cepacia
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
XX
RN   [1]
RP   1-1448
RA   Gronow S.;
RT   ;
RL   Submitted (20-NOV-2001) to the EMBL/GenBank/DDBJ databases.
RL   Gronow S., Medical and Biochemical Microbiology, Research Center Borstel,
RL   Parkallee 22, 23845 Borstel, GERMANY.
XX
RN   [3]
RX   DOI; 10.1074/jbc.M206942200
RX   PUBMED; 12427755.
RA   Gronow S., Noah S., Blumenthal A., Lindner B., Brade H.;
RT   "Construction of a deep-rough mutant of Burkholderia cepacia ATCC 25416 and
RT   characterization of its chemical and biological properties";
RL   J. Biol. Chem. 278(3):1647-1655(2003).
XX
DR   StrainInfo; 43431; ATCC 25416.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1448
FT                   /organism="Burkholderia cepacia"
FT                   /strain="ATCC 25416"
FT                   /mol_type="genomic DNA"
FT                   /note="genomovar I"
FT                   /db_xref="taxon:292"
FT   CDS             1..1359
FT                   /transl_table=11
FT                   /gene="waaA"
FT                   /product="kdo transferase"
FT                   /function="glycosyltransferase"
FT                   /db_xref="GOA:Q8VVA1"
FT                   /db_xref="InterPro:IPR001296"
FT                   /db_xref="InterPro:IPR007507"
FT                   /db_xref="UniProtKB/TrEMBL:Q8VVA1"
FT                   /protein_id="CAD12639.1"
FT                   /translation="MLRVIYRALWWLVAPAAVIRLYVRSRKERGYREHIAERFGHVAGR
FT                   SRDDRAPLIWVHAVSVGETRAAQPLIDALMRARPDARILLTHMTPSGRATGEQIFGDRV
FT                   LRCYLPYDMPGAVRRFLRAWRPTLGLVMETEVWPTLIGECRRADVPLVLTNARMSARSF
FT                   RRAAKFGAATRDVFGGFSRVLAQSPADAERLTSLGARNVTVLGNLKFDMTTPPELAARG
FT                   HAWRDAIGARPVWVAASTRENEEALVLQAFAAMRTPGALLVLVPRHPQRFAEVEALVGR
FT                   NGLKCVRRSAWAADAAALAAGRPAAEPLPDDVTVLLGDSMGELGAYYAAADIVFIGGSL
FT                   LPLGGQNLIEACAVGVPVLIGKHVFNFTQATADAVAAGAALQVEDPLDLAHVLDALFAD
FT                   NARRIAMGAAGAAFAARHRGATARTVDVLAALLPPAEAGAHALPGVQDAADDA"
XX
SQ   Sequence 1448 BP; 181 A; 506 C; 549 G; 212 T; 0 other;
     atgctgcggg tgatctatcg cgcgctgtgg tggctcgtcg cgccggccgc ggtcatccgg        60
     ctctacgtgc gctcgcgcaa ggagcgcggc tatcgcgagc acatcgccga acgtttcggc       120
     cacgtggcgg gccgctcgcg cgacgaccgc gcgccgctga tctgggtgca tgcggtgtcg       180
     gtcggcgaga cgcgcgccgc gcagccgctg atcgacgcgc tgatgcgcgc gcgtcccgat       240
     gcgcgcatcc tgctcacgca catgacgccg agcggccgcg cgaccggcga acagatcttc       300
     ggcgatcgcg tgctgcgctg ttacctgccg tacgacatgc ccggcgcggt gcggcgcttc       360
     ctgcgcgcgt ggcggccgac gctcggcctc gtgatggaaa ccgaggtgtg gcccacgctg       420
     atcggcgagt gccgccgcgc ggacgtgccg ctggtgctga ccaatgcgcg gatgtccgcg       480
     cgttcgttcc ggcgcgcggc gaagttcggc gcggcgacgc gcgacgtgtt cggcggcttc       540
     tcgcgcgtgc tcgcgcagag cccggccgat gcggagcggc tgacgtcgct cggcgcgcgc       600
     aacgtgaccg tgctcggcaa cctgaagttc gacatgacga cgccgccgga actggcggcg       660
     cgcggccatg cgtggcgcga cgcgatcggc gcgcggccgg tgtgggtcgc cgcgagcacg       720
     cgcgagaacg aggaggcgct ggtgctgcag gcgttcgccg cgatgcgtac gcccggcgcg       780
     ctgctggtgc tcgtgccgcg tcatccgcaa cgtttcgcgg aggtcgaggc gctcgtcggg       840
     cgcaacgggc tcaagtgcgt gcgacgctcc gcatgggcgg ccgacgcggc ggcactcgca       900
     gccggccgtc cggccgccga gccgctgccg gacgacgtga cggtgctgct cggcgattcg       960
     atgggcgagc tcggcgcgta ttacgcggcc gccgacatcg tgttcatcgg cggcagcctg      1020
     ctgccgctcg gcggacagaa cctgatcgaa gcgtgcgcgg tcggcgtacc ggtactgatc      1080
     gggaagcacg tattcaactt cacgcaggcg accgccgacg cggtcgcggc cggcgcggca      1140
     ctgcaggtcg aggatccgct cgatctcgcg cacgtgctcg acgcgctgtt tgccgacaac      1200
     gcgcggcgca tcgcgatggg tgcggccggc gcggcgttcg ctgcgcgtca ccgcggcgcg      1260
     accgcgcgca cggtcgacgt gctcgcggca ctgctgccgc ccgccgaagc cggcgcgcat      1320
     gcgctgccgg gcgtgcagga cgctgccgac gacgcataga cggcgggcgg cgcgatgccg      1380
     cccggactcg cgtaagccga attctgcaga tatccatcac actggcggcc gctcgagcat      1440
     gcatctag                                                               1448
//
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