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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ318956; SV 1; linear; genomic DNA; STD; MAM; 543 BP.
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AC   AJ318956;
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DT   04-SEP-2001 (Rel. 69, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 5)
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DE   Sus scrofa partial EXT1 gene for glycosyltransferase, exon 9 and partial
DE   joined CDS
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KW   ER-resident type II transmembrane glycosyltransferase;
KW   exostoses (multiple)1; ext1 gene.
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OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus.
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RN   [1]
RP   1-543
RA   Cepica S.;
RT   ;
RL   Submitted (28-AUG-2001) to the EMBL/GenBank/DDBJ databases.
RL   Cepica S., Department of Genetics, Inst. Animal Physiology and Genetics,
RL   Libechov, 277 21, CZECH REPUBLIC.
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RN   [2]
RX   DOI; 10.1046/j.1365-2052.2002.0742g.x
RX   PUBMED; 11849148.
RA   Cepica S., Rohrer G.A., Masopust M.;
RT   "Linkage mapping of a HaeIII PCR-RFLP within the porcine EXT1 gene";
RL   Anim. Genet. 33(1):81-82(2002).
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CC   Related sequence AJ318957
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FH   Key             Location/Qualifiers
FH
FT   source          1..543
FT                   /organism="Sus scrofa"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9823"
FT   misc_feature    1..543
FT                   /phenotype="exostoses (multiple)1"
FT   CDS             join(<1..76,AJ318957.1:213..>339)
FT                   /codon_start=3
FT                   /gene="EXT1"
FT                   /product="ER-resident type II transmembrane
FT                   glycosyltransferase"
FT                   /db_xref="GOA:Q95KP6"
FT                   /db_xref="HSSP:1OMZ"
FT                   /db_xref="InterPro:IPR015338"
FT                   /db_xref="UniProtKB/TrEMBL:Q95KP6"
FT                   /protein_id="CAC67995.1"
FT                   /translation="ERWGYTSKWTNDYSMVLTGAAIYHKFYHYLYTHYLPASLKNMVDQ
FT                   LANCEDILMNFLVSAVTKLPPI"
FT   exon            1..76
FT                   /gene="EXT1"
FT                   /number=9
FT   repeat_region   complement(<122..>342)
FT                   /gene="EXT1"
FT                   /rpt_family="SINE SSPRE"
FT                   /rpt_unit_range=122..342
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SQ   Sequence 543 BP; 130 A; 127 C; 138 G; 148 T; 0 other;
     aagagcggtg ggggtacaca tccaagtgga caaatgacta ctccatggtg ttgacaggag        60
     ctgctattta ccacaagtga gggatttgga cattattcat ttatttattt ttggtctttt       120
     tagggccgca cctgcggcat atgggggtcc ccaggcgagg ggtcgaattg gagccacagc       180
     tgccggccta cacctcaacc acagcaacgc aggatctgag ctgtgtctcg cgagctacac       240
     cacacgctca cggcaacgct ggatccttaa cccactgagt ggggccaggg atggaacctg       300
     catcctcatg gatcctagtc agattcattt gcactgagac acatttggga ctcctggatg       360
     tcattttata tcgctcctca tatgagtttt tggctgctgc agaaatagta tgttgcacca       420
     gatctgggtt atgaccttaa caaaaatcag ttttgcatcc ccgtttcagg tctgttgatg       480
     tgaccaacat gtgtctttga agccagtaga actgttcggc atatggcaat tctagagatt       540
     atg                                                                     543
//
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