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EBI DbfetchID AJ304794; SV 1; linear; genomic DNA; STD; INV; 4195 BP. XX AC AJ304794; XX DT 22-MAR-2001 (Rel. 67, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 3) XX DE Chlamys islandica chlamysin gene for lysozyme, exons 1-4 XX KW chlamysin gene; lysozyme. XX OS Chlamys islandica OC Eukaryota; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Pectinoida; OC Pectinoidea; Pectinidae; Chlamys. XX RN [1] RP 1-4195 RA Nilsen I.W.; RT ; RL Submitted (18-DEC-2000) to the EMBL/GenBank/DDBJ databases. RL Nilsen I.W., Center of Marine Biotechnology, Norwegian Institute of RL Fisheries & Aquacultures, Breivika, N-9291 Tromso, NORWAY. XX RN [2] RX DOI; 10.1016/S0014-5793(99)01693-2 RX PUBMED; 10618496. RA Nilsen I.W., Oeverboe K., Sandsdalen E., Sandaker E., Sletten K., RA Myrnes B.; RT "Protein purification and gene isolation of chlamysin, a cold-active RT lysozyme-like enzyme with antibacterial activity"; RL FEBS Lett. 464(3):153-158(1999). XX RN [3] RX DOI; 10.1016/S0378-1119(01)00457-7 RX PUBMED; 11376934. RA Nilsen I.W., Myrnes B.; RT "The gene of chlamysin, a marine invertebrate-type lysozyme, is organized RT similar to vertebrate but different from invertebrate chicken-type lysozyme RT genes"; RL Gene 269(1-2):27-32(2001). XX CC Related sequence: AJ250028 XX FH Key Location/Qualifiers FH FT source 1..4195 FT /organism="Chlamys islandica" FT /mol_type="genomic DNA" FT /db_xref="taxon:27808" FT mRNA join(1..88,1493..1530,3017..3128,3977..4195) FT /gene="chlamysin" FT /note="cDNA sequence accession nr. and published in FT citation 1" FT /citation=[2] FT 5'UTR 1..18 FT /gene="chlamysin" FT CDS join(19..88,1493..1530,3017..3128,3977..4170) FT /gene="chlamysin" FT /product="lysozyme" FT /db_xref="GOA:Q9BI29" FT /db_xref="InterPro:IPR008597" FT /db_xref="UniProtKB/TrEMBL:Q9BI29" FT /citation=[2] FT /citation=[3] FT /protein_id="CAC34834.1" FT /translation="MMYFVLLCLLATGTTYGAHNFATGIVPQSCLECICKTESGCRAIG FT CKFDVYSDSCGYFQLKQAYWEDCGRPGGSLTSCADDIHCSSQCVQHYMSRYIGHTSCSR FT TCESYARLHNGGPHGCEHGSTLGYWGHVQGHGC" FT sig_peptide 19..69 FT /gene="chlamysin" FT /citation=[3] FT mat_peptide join(70..88,1493..1530,3017..3128,3977..4119) FT /gene="chlamysin" FT /product="chlamysin" FT /citation=[3] FT exon 1..88 FT /gene="chlamysin" FT /number=1 FT intron 89..1492 FT /gene="chlamysin" FT /number=1 FT repeat_region 863..1277 FT /rpt_type=TANDEM FT /rpt_unit_range=863..879 FT exon 1493..1530 FT /gene="chlamysin" FT /number=2 FT intron 1531..3016 FT /gene="chlamysin" FT /number=2 FT repeat_region 1965..2524 FT /rpt_type=TANDEM FT /rpt_unit_range=1965..1986 FT repeat_region 2551..2718 FT /rpt_type=TANDEM FT /rpt_unit_range=2551..2671 FT exon 3017..3128 FT /gene="chlamysin" FT /number=3 FT intron 3129..3976 FT /gene="chlamysin" FT /number=3 FT exon 3977..4195 FT /gene="chlamysin" FT /number=4 FT 3'UTR 4171..4195 XX SQ Sequence 4195 BP; 1184 A; 765 C; 789 G; 1457 T; 0 other; gcagaccagt acgacataat gatgtatttt gttctgcttt gtttgttggc aacagggacg 60 acttacggcg ctcacaattt tgccacaggt gactatgacc atattatgct ttacttgaat 120 agtattgagg tatcgtttat acaaaaggac caaatctgaa cacagagttt gtttggttat 180 gttaactaag acagggtcaa atgttgtttg ctttttttaa agttgaggaa ttttatatta 240 atggcatttt ggaacgacat tctttgttgt atcactgtac atacaaattt ttcagatgta 300 taacgtcatt gttcccaaaa cgagacattt aaaaaatgaa tatgtgtttt ataccatagt 360 gtcatttcaa aaacaattgt gtttttttca tttttttcac aaatatatac cgtttacttt 420 ttttacttta agttcatata tccggcacgt ggttctataa atagaacgcg aaagtcacgt 480 aggcccttga gcagatttca actgtaacta gaaagagtca cttgggtatt tggctaacat 540 cggcagataa acgatcaata taagcaaaca gttgtacata gttcgaatat ttagagtcag 600 aggacctttt gattaaattt cttcttaaga ctagcattat ttttgaaaaa atcggattct 660 gaaaaagata tcacaataaa tagcgtcgca tggcactttt cgtttcattt ttaactttaa 720 acgttccttg ttatcaaaat cagaggataa taaagttgat atacggttga attgacatga 780 agtaaacatt gcatacctaa aaatagtgtt tagcattgca tgtgaatttc ttcctcgagt 840 gtctggttta tggtgctgtt gtttttgggt aatgtcccgt tttgggtaat gtcccgtttt 900 gggtaatgtc ccgttttggt aatgtcccgt gtttggtaat gttccgtttt gggtaatgtc 960 ccgttttggg cactgttccg ttttgggtac tgttccgttt cgggtattgc ccgttttggg 1020 tactgttccg ttttgggtat tggccgtttt gggtactgtc gcgttttggt aatgtcccgt 1080 tttgggtatt gcccgttttg ggtaatgtcc cgttttgggt aatgtcccgt ttggggtatt 1140 gcccgttttg gtaatgtccc gtgtttggta atgttccgtt ttgggtattg cccgttttgg 1200 gtactgttcc gttttgggta ttggccgttt tggtaatgtc ccgtgtttgg taatgtcccg 1260 ttttgggtat tgcccgtttt tggtaatgtc ccgttagggt actgttccgt tttgggtcca 1320 ctgacgttac atgttattca gttatttgta ccttaatctg caccgatttc ttcatacgaa 1380 atacttgtaa ttttgtttta tttcactatt tttttcgtct ctcctttccg aggaattgtc 1440 tcatacttgt tagttgttta tttcactaat tcttccgtcc cttctttccc aggaattgtc 1500 ccacagagtt gtttggagtg tatttgtaag gtaagtataa tttgtcttgg tagtttaaca 1560 aaagtgcttc gtttgactat gtgctatgtc aggcattaac attcatactc ttattttgtt 1620 gcgtcgatgt gtctgacaga aaatgttcat tatcaacttt tctactaaaa caaaatcttt 1680 catatttaaa caatattgat attcccccat tagggcacag ctaaggtaaa ctctaaacga 1740 gtacaaagat aaccaaggtt agatacgtca taacgtatct aaccttggtt atcttgtact 1800 cgaaactctt gataaagatt ttgttaattt agaagcctgt tatagatatg tatattgatg 1860 tgtttacaat ttgtttgctt gatttatgtt gaaatacttt acggtacctt actgaggcgg 1920 gatcaaggac attttattag ctgtcccaaa aaactgatat tataaaccca gaacactgtt 1980 cacagtaacc cagaacactg ttcacagtaa cccagaacac tgttcacagt ttaacccaga 2040 acactgttca cagtaaccca gaacactgtt cacagtaacc cagaacactg ttcatagtaa 2100 cccagaacac tgttcacagt aacccagaac actattcaca gtaacccaga acactgttca 2160 tagtaaccca gaacactgtt cacagtaacc cagaacactg ttcatagtaa cccagaacac 2220 tgttcacagt aacccagaac actgttcaca gtaacccaga acactgttcg ttcacagtaa 2280 cccagaacac tgttcacaga cagtaaccca gaacactgtt cacagtaacc cagaacactg 2340 tttacagtaa cccagaacac tgttcatagt aacccagaac actgttcaca gtaacccaga 2400 acactgttca cagtaaccca ggacactgtt cacagtaaac cagaacactg ttcacagtaa 2460 cctaggacac tgttcacagt aacccagaac actgttcaca gtaacccaga acactgttca 2520 cagtaactca gaacactgtt cactgttcac tgttcacagt attgttgatt gtgttcacag 2580 tattgttgat tgtgttcaca gtattgttga ttgtgttcac agtattgttg attgtgttca 2640 cagtattgtt gattgtgttc acagtattgt tgattgtgtt cacagtattg ttgattgtgt 2700 tcacagtatt gttgattgtc ttttgtttat ttcatctttc ttatttctca tggaagtccc 2760 acaatctttg tgaagtcttt gtgaagtccc cacaatcttt ggttttcttt ttagaaatgg 2820 gtgatcaaag ctattgtcaa acagttccaa tacgtagtga cagtgtctgg cagaggtacg 2880 gggatctgtc cctatacttt gtatgttagg acgctatcca gctcatcttt atgctaattg 2940 ataaaaagga ataaatatag ttgatactaa ggtttgtagg gttttctttt gacattgtgt 3000 ccttgtttta ttatagacgg agtccggatg tagagctatt ggatgcaaat ttgacgtata 3060 ctccgactcg tgtggctact ttcagttaaa acaggcctac tgggaggact gtggcaggcc 3120 aggaggatgt gagtctaaat atagacattg ctaatatttc agataaaaga aatacagtgt 3180 ttgtcaacaa tcgtctcctc gaaccataca catttatctg cgcacactcg acaaatatgt 3240 acaagaaaat tagttatgtg atatatagag atatgtgaat cgatagactt tttcaattat 3300 tacctgctat attctacaaa tatgacattt aaaaataact actgaagagt gcatgaaaga 3360 aaatcaaaat cacaccatat gaatttccgg tttattccga caaggtaagg agatgcgaat 3420 gatacgatgc gagggaatat ttaatttgat gccataatgc catagttttg tttcgcatga 3480 atcaaattaa tatcttacat aaagtattac aatagttatc ttataaatat gactttagtt 3540 acattctcta taaataaact ataaacagtc gtttttacat gatgttacga ataacacgag 3600 ttttcgtgtt gatgaatgca tcaaggaatg gatgtgaaag tccgcgttat aaacgagagt 3660 aataactctc tcggtactta agccttactg acgctaaaat actcctttaa ttagttattt 3720 gaatcagggg aaaataaccg gtcagttcaa gttaaatgaa ccttttgtta ataggtacat 3780 ctttattata acagtgttaa atacgttacg caaaaaatgt ttcatttacg tgatataaca 3840 acattttatt tcgaacatat acacaaatcg atctcagaaa tgtctaacat aatacatatt 3900 tttaaagtaa gtgtcaaagc atgaactcat ttctattatt attcttgttt actttttaca 3960 ttttttcgtt tattagctct cacttcttgt gctgatgaca tccactgttc gtcccagtgt 4020 gtacagcact acatgagcag atacataggc catacttcgt gttcacgaac ctgtgagagc 4080 tatgcccggt tacacaatgg tggcccacat ggttgtgaac atggctctac cttaggctac 4140 tggggtcatg tacagggtca cggctgctga aggtcgcagt cattattgtt ttata 4195 // |
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