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EBI DbfetchID AJ294944; SV 1; linear; genomic DNA; STD; PRO; 1662 BP. XX AC AJ294944; XX DT 13-JUN-2001 (Rel. 68, Created) DT 13-JUN-2001 (Rel. 68, Last updated, Version 1) XX DE Clostridium difficile partial tcdB-C34 gene for TcdB-C34 Cluster1-2 XX KW TcdB toxin; TcdB-C34 Cluster1-2; tcdB-C34 gene. XX OS Clostridium difficile OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. XX RN [1] RP 1-1662 RA Mehlig M.; RT ; RL Submitted (11-OCT-2000) to the EMBL/GenBank/DDBJ databases. RL Mehlig M., Medical Microbiology, Universitaetsklinik Mainz, Hochhaus Am RL Augustusplatz, 55131 Mainz, GERMANY. XX RN [2] RX DOI; 10.1111/j.1574-6968.2001.tb10638.x RX PUBMED; 11430410. RA Mehlig M., Moos M., Braun V., Kalt B., Mahony D.E., von Eichel-Streiber C.; RT "Variant toxin B and a functional toxin A produced by Clostridium difficile RT C34"; RL FEMS Microbiol. Lett. 198(2):171-176(2001). XX FH Key Location/Qualifiers FH FT source 1..1662 FT /organism="Clostridium difficile" FT /strain="C34" FT /mol_type="genomic DNA" FT /country="Canada" FT /db_xref="taxon:1496" FT CDS 1..>1662 FT /transl_table=11 FT /gene="tcdB-C34" FT /product="TcdB-C34 Cluster1-2" FT /function="glucosyltransferase" FT /db_xref="InterPro:IPR007577" FT /db_xref="UniProtKB/TrEMBL:Q93L39" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAC41640.1" FT /translation="MSSVNRKQLEKMANVRFRVQEDEYVAILDALEEYHNMSENTVVEK FT YLKLKDINSLTDTYIDTYKKSGRNKALKKFKEYLVTEILELKNSNLTPVEKNLHFIWIG FT GQINDTAINYINQWKDVNSDYNVNVFYDSNAFLINTLKKTIIESASNDTLESFRENLND FT PEFNHTAFFRKRMPIIYDKQQNFINYYKVQKEENPDLIIDDIVKTYLSNEYSKDIDELN FT AYIEESLNKVTENSGNDVRNFEEFKTGEVFNLYEQELVERWNLAGASDILRVAILKNIG FT GVYLDVDMLPGIHPDLFKDINKPDSVKTAVDWEEMQLEAIMKYKEYIPEYTSKHFDTLD FT EEVQSSFESVLASKSNKSEIFLPLGDIEVSPLEVKIAFAKGSIINQALISAKDSYCSDL FT LIKQIQNRYKTLNDTLGPIISQGNDFNTTMNNFGESLGAIANEENISFIAKIGSYLRVG FT FYPEANTTITLSGPTIYAGAYKDLLTFKEMSIDTSILSSELRNFEFPKVNISQATEQEK FT NSLWQFNEERAKIQFEEYKKNYFEGALGEDDNLDFSQ" XX SQ Sequence 1662 BP; 686 A; 190 C; 275 G; 511 T; 0 other; atgagctcag ttaatagaaa acagttagaa aaaatggcaa atgtaagatt tcgtgttcag 60 gaagatgaat atgtagcaat attagatgca ttagaagaat atcataatat gtcagaaaat 120 actgtagttg aaaagtatct aaaattaaaa gatataaaca gtttaacaga tacctatata 180 gatacatata aaaaatctgg ccgaaataaa gccttaaaaa aatttaaaga gtacttagtt 240 acagagatat tagaattaaa aaatagcaat ttaactccag tcgagaaaaa tttacatttt 300 atatggattg gagggcaaat aaatgatact gctattaatt atataaatca atggaaagat 360 gtaaatagtg actataatgt taatgttttt tatgatagta atgcattttt gataaacaca 420 ttgaaaaaaa ctataataga atcagcatca aatgatactc ttgaatcatt tagagaaaat 480 ttaaatgatc ctgaatttaa ccacactgca tttttcagaa aacgtatgcc aatcatctat 540 gataaacagc aaaatttcat aaattactat aaagttcaaa aagaagaaaa tcctgacctt 600 ataattgatg atattgtaaa gacatatctt tcaaacgagt attcaaagga tatagatgaa 660 cttaatgctt atattgaaga gtcattaaac aaagtcacag aaaatagtgg aaatgatgtt 720 agaaactttg aagaatttaa aactggagaa gtattcaatt tatatgaaca agagttagta 780 gaaagatgga atcttgctgg tgcatctgat atattaagag tcgctatatt gaaaaatatt 840 ggtggagtct atctagatgt tgatatgtta ccaggaatac acccagattt atttaaagat 900 ataaataagc ctgattcagt aaagacagct gtagattggg aagagatgca gttagaagcc 960 ataatgaaat ataaagaata tataccagaa tatacttcaa aacattttga tacattggat 1020 gaagaagttc aaagtagctt tgaatctgtt ctagcttcta agtctaataa gtcagaaata 1080 tttttaccac taggagatat agaggtatca cctttagaag taaaaattgc atttgccaaa 1140 ggttctatta taaatcaagc tctaatttct gcaaaagact catattgtag tgacttacta 1200 ataaaacaaa tccaaaacag atataagaca ctgaatgata ctttaggtcc aattattagt 1260 caaggtaatg attttaatac tacaatgaac aattttggtg aaagtttggg agctatagct 1320 aatgaagaga atataagttt tatagcaaaa atcggaagtt atttaagggt tggattttat 1380 cctgaagcta atactacaat tactttaagt ggtcctacaa tatatgcagg agcttataaa 1440 gatttattaa catttaaaga gatgagcata gatacttcta tattgtcatc tgagttaaga 1500 aatttcgaat ttcctaaggt taatatatct caagcaacag aacaagagaa aaatagctta 1560 tggcaattta acgaagaaag agctaaaatt caatttgaag aatacaagaa aaattatttt 1620 gaaggtgcac ttggagaaga tgataatctt gatttttctc ag 1662 // |
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