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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ292370; SV 1; linear; mRNA; STD; INV; 1445 BP.
XX
AC   AJ292370;
XX
DT   07-DEC-2000 (Rel. 66, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Echinococcus multilocularis mRNA for putative mannose-6-phosphate-isomerase
DE   (pmih gene)
XX
KW   mannose-6-phosphate-isomerase; pmih gene; trans-splicing.
XX
OS   Echinococcus multilocularis
OC   Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea;
OC   Taeniidae; Echinococcus.
XX
RN   [1]
RP   1-1445
RA   Brehm K.R.;
RT   ;
RL   Submitted (07-JUL-2000) to the EMBL/GenBank/DDBJ databases.
RL   Brehm K.R., Institute for Hygiene and Microbiology, University of
RL   Wuerzburg, Josef-Schneider-Strasse 2, 97080 Wuerzburg, GERMANY.
XX
RN   [3]
RX   DOI; 10.1074/jbc.M006091200
RX   PUBMED; 10973970.
RA   Brehm K., Jensen K., Frosch M.;
RT   "mRNA trans-splicing in the human parasitic cestode Echinococcus
RT   multilocularis";
RL   J. Biol. Chem. 275(49):38311-38318(2000).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1445
FT                   /organism="Echinococcus multilocularis"
FT                   /lab_host="Meriones unguiculatus"
FT                   /isolate="H-95"
FT                   /mol_type="mRNA"
FT                   /country="Germany"
FT                   /clone="Em2342"
FT                   /db_xref="taxon:6211"
FT   misc_RNA        1..36
FT                   /function="trans_splicing"
FT                   /note="spliced leader RNA"
FT   CDS             40..1341
FT                   /gene="pmih"
FT                   /product="putative mannose-6-phosphate-isomerase"
FT                   /function="synthesis of GDP-mannose"
FT                   /db_xref="GOA:Q9GP38"
FT                   /db_xref="HSSP:1PMI"
FT                   /db_xref="InterPro:IPR014710"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9GP38"
FT                   /protein_id="CAC18544.1"
FT                   /translation="MLRLKCASQRYDWGKVGVNSIVYKLQVASENPDISHVDLPYAELW
FT                   MGTHPSGSSCLWDNPHVTLAAHIQENPASLGKPSLIYFGRRLPFLFKVLSVAKALSIQA
FT                   HPDKKMAVRLHAEQPDLYKDGSHKPEMAIALTDFEALLGFRPLNQILAFIQAFPELAEL
FT                   TTLELPSPEEKRDVQPPSIKQLYSNLMRSSPEKVESTIKSLLNRFTTGSKSVCDPPLSI
FT                   LGVDLQEEDVQALVDLFLRLTQAFPGDVGCLSIFFLNYIRLKSGEAIFLKANTPHAYLS
FT                   GDCVECMANSDNVVRAGLTPKFKDVERLLEMLDYTPLTDSLRLGATQPIPTPEGISMKS
FT                   FIPPVSEFAVDVIQFDAESRGFSLPSVPTASILLFLHGQGTITCPSTGEACSQETKFGP
FT                   GFVYFVPADMIVNLVSKEDRKGSLHAFRAYVNRK"
FT   polyA_signal    1407..1412
FT                   /gene="pmih"
FT   polyA_site      1432
FT                   /gene="pmih"
XX
SQ   Sequence 1445 BP; 348 A; 382 C; 322 G; 393 T; 0 other;
     caccgttaat cggtccttac cttgcagttt tgtatgatca tgcttagact taagtgtgct        60
     tcgcagcgct atgactgggg aaaggtgggc gtgaacagca ttgtctacaa attacaggtc       120
     gcatcagaaa atccggacat ctctcatgtc gatttaccct acgcagaact gtggatgggt       180
     actcatccct ctgggtcttc ctgtctctgg gacaatccgc atgttacctt ggcagcccac       240
     attcaggaga atcctgcttc tctcggaaaa ccctccttga tctactttgg gcgacgcttg       300
     cccttcctct tcaaagtgct ttcagttgct aaggcactct ctatccaagc acatcctgat       360
     aagaaaatgg cggttcgttt gcacgcagag cagccagacc tctacaaaga cgggagtcac       420
     aagcccgaga tggcaattgc gctgaccgat tttgaggcgt tgctgggatt ccgtccactc       480
     aaccaaattc ttgcctttat tcaagccttt cccgagttgg ccgaacttac taccctggaa       540
     ctgccatccc cagaagaaaa gagagatgtg caacctcctt ccatcaaaca actctactcc       600
     aatctgatga ggtcttcccc agagaaagtt gaatcgacta tcaaatccct tttgaatcgc       660
     tttacgactg gttcgaagtc ggtctgtgat ccacccctta gtattctagg tgtggatctg       720
     caggaggaag atgtccaagc gttggttgat ctcttcctcc gtctaaccca ggcatttcct       780
     ggtgatgttg gctgtctcag cattttcttt ctcaactaca tcaggctaaa atcgggagaa       840
     gccatcttct taaaggcgaa tacaccacac gcctacctct ccggcgactg tgtagaatgc       900
     atggccaact cggacaacgt ggtgcgcgcg ggtctgacgc ccaagttcaa ggacgtggag       960
     aggttattgg agatgctgga ttacactcca ctaacagatt cgctgcggct cggtgcgact      1020
     cagccgatcc caacgcctga ggggatttct atgaagtcat ttatacctcc ggtgtctgag      1080
     ttcgcagtcg atgtgattca gttcgacgcg gagagccgag gctttagtct cccttcagtc      1140
     cccacagcga gtattctcct ctttcttcat ggtcaaggca ccatcacatg ccccagcaca      1200
     ggcgaagcct gctcacaaga aacaaaattc ggtcctggct ttgtctactt cgtgccagcc      1260
     gatatgatag tcaatttggt ttcgaaggag gatagaaaag gttcgttgca tgcctttcgt      1320
     gcctacgtga acaggaagtg atttcgtact tacgctatca atcgttccca ttgcttacca      1380
     tactactcgt tgctttttcc aatagcatta taattacatt tacctctttt aaaaaaaaaa      1440
     aaaaa                                                                  1445
//
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