 |
|
EBI DbfetchID AJ278990; SV 1; linear; genomic DNA; STD; PLN; 6014 BP. XX AC AJ278990; XX DT 19-MAR-2001 (Rel. 67, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 2) XX DE Arabidopsis thaliana gcs1 gene for alpha-glucosidase 1, exons 1-22 XX KW alpha-glucosidase 1; GCS1 gene. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-6014 RA Lepiniec L.; RT ; RL Submitted (08-SEP-2000) to the EMBL/GenBank/DDBJ databases. RL Lepiniec L., Biologie Des Semences, Inra, INRA, centre de versailles, Route RL de St Cyr, Versailles 78026 Cedex, FRANCE. XX RN [2] RX DOI; 10.1093/emboj/20.5.1010 RX PUBMED; 11230125. RA Boisson M., Gomord V., Audran C., Berger N., Dubreucq B., Granier F., RA Lerouge P., Faye L., Caboche M., Lepiniec L.; RT "Arabidopsis glucosidase I mutants reveal a critical role of N-glycan RT trimming in seed development"; RL EMBO J. 20(5):1010-1019(2001). XX FH Key Location/Qualifiers FH FT source 1..6014 FT /organism="Arabidopsis thaliana" FT /chromosome="1" FT /variety="Wassilewskija" FT /mol_type="genomic DNA" FT /db_xref="taxon:3702" FT CDS join(1..300,388..459,540..795,939..1105,1267..1354, FT 1456..1520,1639..1740,2153..2231,2595..2701,2821..2946, FT 3096..3202,3279..3351,3703..3830,4081..4145,4452..4604, FT 4692..4741,4846..4905,5025..5175,5281..5368,5445..5557, FT 5667..5728,5803..5949) FT /gene="gcs1" FT /product="alpha-glucosidase 1" FT /function="essential for N-glycan trimming" FT /db_xref="GOA:Q9C5B4" FT /db_xref="InterPro:IPR004888" FT /db_xref="InterPro:IPR008928" FT /db_xref="UniProtKB/TrEMBL:Q9C5B4" FT /protein_id="CAC34725.1" FT /translation="MTGASRRSARGRIKSSSLSPGSDEGSAYPPSIRRGKGKELVSIGA FT FKTNLKILVGLIILGIIVIYFVINRLVRHGLLFDESQKPRVITPFPAPKVMDLSMFQGE FT HKESLYWGTYRPHVYFGVRARTPLSLVAGLMWLGVKDEMYVMRHFCENSDDLSTFGWRE FT HNGRDYGRQELVENDMVIETSFVKSKGDGLGYGGDWAVRIDVKNKGLNDDVKRSAHLFF FT YLADEGGNVLNLGQDGLDFQGSSLLVSGSREDVGDWQIHLKSQNQLETHYSGFKTPHIY FT NLSDLVQQNLALQARKFGRLQLSDTSEDSSNIYIFQISGRLPFTIDIPFISGIKGESSN FT VEKRLTSLTGLPLSDLLKKKHQEFDAKFNECFNLSEKHDSETLGVGRTAIANMLGGIGY FT FYGQSKIYVPKSTQPGSRDNFLLYWPAELYTAVPSRPFFPRGFLWDEGFHQLLIWRWDI FT RITLDIVGHWLDLLNIDGWIPREQILGAEALSKVPEEFVVQYPSNGNPPTLFLVIRDLI FT DAIRMEKFVASEKDEVLSFLERASVRLDAWFQWFNTSQKGKEIGSYFWHGRDNTTTQEL FT NPKTLSSGLDDYPRASHPSEDERHVDLRCWMYRAADCMHSITELLGKEDKLSKENYNST FT AKLLSNFNLLNQMHYDSDYGAYFDFGNHTEKVKLIWKEVIQENGQLSRQLVRKTFGKPK FT LKLVPHLGYVSFFPFMSRIIPPDSPILEKQLNLISNRSILWSDYGLVSLAKTSSMYMKR FT NTEHDAPYWRGPIWMNMNYMILSSLYHYSIVDGPYREKSKAIYTELRSNLIRNVVRNYY FT ETGYIWEQYDQVKGTGKGTRLFTGWSALTLLIMSEDYPIF" FT exon <1..300 FT /gene="gcs1" FT /number=1 FT intron 301..387 FT /gene="gcs1" FT /number=1 FT exon 388..459 FT /gene="gcs1" FT /number=2 FT intron 460..539 FT /gene="gcs1" FT /number=2 FT exon 540..795 FT /gene="gcs1" FT /number=3 FT intron 796..938 FT /gene="gcs1" FT /number=3 FT exon 939..1105 FT /gene="gcs1" FT /number=4 FT intron 1106..1266 FT /gene="gcs1" FT /number=4 FT exon 1267..1354 FT /gene="gcs1" FT /number=5 FT intron 1355..1455 FT /gene="gcs1" FT /number=5 FT exon 1456..1520 FT /gene="gcs1" FT /number=6 FT intron 1521..1638 FT /gene="gcs1" FT /number=6 FT exon 1639..1740 FT /gene="gcs1" FT /number=7 FT intron 1741..2152 FT /gene="gcs1" FT /number=7 FT exon 2153..2231 FT /gene="gcs1" FT /number=8 FT intron 2232..2594 FT /gene="gcs1" FT /number=8 FT exon 2595..2701 FT /gene="gcs1" FT /number=9 FT intron 2702..2820 FT /gene="gcs1" FT /number=9 FT exon 2821..2946 FT /gene="gcs1" FT /number=10 FT intron 2947..3095 FT /gene="gcs1" FT /number=10 FT exon 3096..3202 FT /gene="gcs1" FT /number=11 FT intron 3203..3278 FT /gene="gcs1" FT /number=11 FT exon 3279..3351 FT /gene="gcs1" FT /number=12 FT intron 3352..3702 FT /gene="gcs1" FT /number=12 FT exon 3703..3830 FT /gene="gcs1" FT /number=13 FT intron 3831..4080 FT /gene="gcs1" FT /number=13 FT exon 4081..4145 FT /gene="gcs1" FT /number=14 FT intron 4146..4451 FT /gene="gcs1" FT /number=14 FT exon 4452..4604 FT /gene="gcs1" FT /number=15 FT intron 4605..4691 FT /gene="gcs1" FT /number=15 FT exon 4692..4741 FT /gene="gcs1" FT /number=16 FT intron 4742..4845 FT /gene="gcs1" FT /number=16 FT exon 4846..4905 FT /gene="gcs1" FT /number=17 FT intron 4906..5024 FT /gene="gcs1" FT /number=17 FT exon 5025..5175 FT /gene="gcs1" FT /number=18 FT intron 5176..5280 FT /gene="gcs1" FT /number=18 FT exon 5281..5368 FT /gene="gcs1" FT /number=19 FT intron 5369..5444 FT /gene="gcs1" FT /number=19 FT exon 5445..5557 FT /gene="gcs1" FT /number=20 FT intron 5558..5666 FT /gene="gcs1" FT /number=20 FT exon 5667..5728 FT /gene="gcs1" FT /number=21 FT intron 5729..5802 FT /gene="gcs1" FT /number=21 FT exon 5803..5949 FT /gene="gcs1" FT /number=22 XX SQ Sequence 6014 BP; 1634 A; 1067 C; 1218 G; 2095 T; 0 other; atgaccggag ctagccgtcg gagcgcgcgt ggtcgaatca aatcatcatc attatctccc 60 ggctccgatg aaggaagcgc ttatcctccg agtatccgcc gcggcaaagg caaggaactt 120 gtatcgatcg gtgctttcaa gacgaatctc aagatattgg ttgggttaat catattaggg 180 attatagtaa tctacttcgt aatcaatcgg ctagttcgtc acgggttgtt gtttgatgag 240 tcccagaagc ctagggttat cactcctttt cctgctccga aagtcatgga tttgtcaatg 300 gtacactaat attatattca ctactcgttt ttttaaatca tcaaagtcat gaattggaaa 360 gattcgtttt ttgtatatgt gtaccagttt cagggcgagc acaaagagag cttatactgg 420 ggaacttatc gtcctcatgt ttattttgga gttcgagcta ggtatgcaaa ttccactgtg 480 aatgaatctc tactctggga tattctttgt acaagtaaag aagttgtata tggcaatgca 540 gaactccatt gtccttggta gctggcttga tgtggcttgg tgtcaaagat gagatgtatg 600 ttatgcggca tttctgtgaa aactctgatg atttaagtac atttggctgg agagaacata 660 atggacggga ttatggtcgg caagagctgg ttgaaaacga tatggtaata gagacgagtt 720 ttgtgaagtc caagggagac ggccttggtt atggtgggga ttgggcagtt cggattgatg 780 taaaaaataa agggtaattg ctaatatgca ttcgtactgt aatatacttt tcttcacagt 840 gtcggctttt tgttattttg gcttattgat agaaattcat tttacactgt ggcatgacaa 900 tggtcttttt atttgaccat ggtggaacta aactaggttg aatgatgatg tgaagagaag 960 tgcacatctc ttcttttatt tagctgatga aggtggcaat gttttaaatt taggccaaga 1020 tggtttagat ttccaaggga gctctctcct ggtttcgggg tcacgtgaag atgtaggaga 1080 ctggcagata cacttaaaat cacaggtaat ttgtgattga agttgctctg tagaattctt 1140 aggacttttg tagctgtctc tgctggaagt ggatctgcgg gtggtttgac attttctgtc 1200 atgtttcgga tgtcatccgc tgatgctcat ctggatataa ccattttgat tgttcttcat 1260 ttgcagaatc agctcgagac acattattcc ggtttcaaga cgcctcacat atataatttg 1320 tctgatctag ttcagcaaaa tcttgctctg caggtctgct agttttcgag ctcataactc 1380 attttgaaag ggtccaaagt atattttttt aaagaccgca atgcttacag ttctctttgc 1440 ttgtatgttt tcaggcaagg aagtttggac gacttcagct ctctgacaca tcagaggatt 1500 cttctaacat ttacatcttt caggtaatca gtcttaataa agatgtatgc atgtgtattt 1560 ttgtaaaaat atatagaatt ttcttaactc ctatggaatc tgtgatcaat atgtttcacc 1620 atgtccaatg gcaacataca gatttctggg aggctaccat ttacgattga tattcccttc 1680 atctccggga tcaaaggaga aagttcaaat gtggaaaagc gtttaacaag tctcacaggt 1740 atagttaacc tcctgttatt atcaagcatc attagtgatg tgttttgatt ttcttaacct 1800 tagtttgtgg atgtgacttc catttgagtt tgagtatgga agaacttctc ctccgtttat 1860 gagtttttta cggcaacatt atccttttga gtttcataac tcagataaag aatgctagtc 1920 tgaaatttat gtttgggttc tgtgtgtatt tttgtgtttc ttaagtgtcc ctccaacctg 1980 aggaaaagca gtagcttatt attctgtagc ttcgctaaga atactaatta tgtgtatctg 2040 ttatgattca gtggagcgtc catttaagaa atgttctctg atggcactat atcattgatg 2100 ttgtctactt ttattgcatt tgtactaagt ttcatgtata tgtcgtgtag gtttgccact 2160 ctctgatcta cttaaaaaga aacatcaaga atttgatgca aagtttaatg aatgcttcaa 2220 cctttctgaa aaggtatgct acacatgtta cccatgctaa taaatattct ttagctcacc 2280 cagaggtctt gtttcatgga tcttcatgtt gttgtgaaaa aatcactgtt aacaactttg 2340 tctggatgtg aagtcgagaa cagcgattgc tgagcacttg ctgtattgac ttcagcagtt 2400 tcattcttca cctctcagaa tctccttcca ctaggattag tctctctctg cttatgtgct 2460 attctgtttc tcaatggcgt acatatgttg tcagctccta gttgtcataa cgtacatata 2520 gttaatactt tgcatctatt caaatcgatg ttcataaaag attgagggtc tcaatctcag 2580 tttcctctgg ttccagcatg attcagaaac attgggggtt ggaaggactg caattgcaaa 2640 catgcttggg ggcattggtt acttctatgg ccaatcaaaa atttatgttc ctaaaagcac 2700 tcaggcgagt ttatttccat ccagcatctt atgtattatt ttttcatcct atttatgttc 2760 ctcccatctg caaactagct tggacctctc acagaaccac acaattgata ccttctattg 2820 cagcctggaa gtcgggataa tttcttgctg tattggccag ccgagctgta cacagctgtt 2880 ccaagccgac ctttttttcc tagggggttt ttgtgggacg aaggtttcca tcaattgttg 2940 atctggttcg ttcttattaa tcatttgtct gttgaagatt tctttgctat gctattgcca 3000 cttttgtttg accaattatt attacaaaat tacaagctat attcctccta ctagttgatc 3060 atactttgga atttgttgtg tgtgctttga tcaggcggtg ggatattcgt ataaccttgg 3120 atatcgttgg acactggtta gacctattga acatagatgg atggattcca cgtgagcaaa 3180 ttttgggtgc tgaagctttg aggtatttac tctctctcac taaccgtggt agtcatggtt 3240 attgttgtaa ttgttttata gtgtttctct acctgcagta aggttccaga ggaattcgta 3300 gttcaatacc cgagtaatgg caatccacca actctgtttt tggtgatacg tggtaagaat 3360 ctgttgttct tttatctcta cttacttttt cgtttgtcat tgctctcttt gtttcatgta 3420 tgcctttgtg tcataaaaat tagtttattt tactaccaat ccttgaccag catttattat 3480 agaagaggga atcagcaata tcgttatcag cttccttccg tttgttgtac cgatatttct 3540 gttcctacta caattagatg tttagaactt tgtagccaag atcataagag tgctttcggc 3600 ttcctactaa ttttgtggat tgaaaatgtg acctatcctt gtaaatatag ataaaggctt 3660 acaattaatt cagctccata tagtgacaat ctcttttttt cagatctgat tgacgctata 3720 aggatggaaa agtttgtcgc atcagaaaag gatgaagtat tgtcattcct tgagcgagct 3780 tctgtacgct tagatgcttg gtttcagtgg tttaatactt cccagaaagg taacaacatg 3840 gatgtcctct agtgtataga tttatagaat cctttcagtc ttcaactgct atgtgtttta 3900 gagttagtag taatatctta agtgactatt gcttaccaat cacaattgga tttcttgttg 3960 ttaatcacga tccgtagatg tgatgagttt ttatatagaa ctgatatttt tataggctta 4020 atatggttgg agtgggctag ttcatatgtt tagtaattaa tgaattgatt aaactctagg 4080 caaggagatc ggaagctact tttggcatgg cagagacaac acaacaactc aagaacttaa 4140 ccctaaggta ctatttcttt gtttctcata aactgaaggc tctattttta accctcacat 4200 agactgtgtc gagttttaag gttttctctg actttagctg cttccgtatg ctctatatca 4260 atatatgata ccattgattg atgaattttt gctgcagtat attcttgtta gcgacaaaat 4320 gtctcaaaat ttattgggtg tgtgagcgac catttttagt aggattgcta ctgtgtcagc 4380 tgtttatttg cggatatggt agatcaattg acagatcctc agagatgaat ttgatatctt 4440 aaatttcttg cagacgcttt cgtcggggct ggatgattat ccccgggctt cgcaccctag 4500 tgaagatgag cgacatgttg atcttagatg ctggatgtac cgtgctgcag attgcatgca 4560 ttccatcaca gagcttttag gaaaagaaga caaactttca aaggttagca caagatggaa 4620 aagaaagggg cgtctttttt tttttttttt ttttcacatg ttactgacgt aaaaaaaaaa 4680 aatcctgcag gagaattaca attcaactgc caagctgctt tcaaatttca atcttctgaa 4740 tcaggtttat tctctatcag atgccaacaa ttttctcact ttaacttcat taattttctt 4800 tttcttctca ccattctcta ttctcattca tggataattt ctgagcagat gcactatgat 4860 agtgactatg gggcttactt tgactttggc aatcatacag aaaaagtaag agaagcttca 4920 taaatcaaca agtctgagtg tcaaattttt gtcatataga agaagaagaa cggatgattc 4980 ttggtctttt cattaaccca aatgttcggt gaattgatcc ccaggttaag ttgatatgga 5040 aagaggtaat tcaagaaaat ggtcaattat ctcgacaact tgtaaggaag acttttggga 5100 agccaaagct aaaattggtt cctcacttgg gttacgtcag cttctttccc ttcatgtcta 5160 gaatcatccc acctgtgagt ttttggccaa tatgttttcc actattcgtg atctttgaag 5220 ccctcatgga tcagttgttt tttaaaatct aaatcgtcac atatttttgg ttgagaaagg 5280 attctccaat tctcgagaaa cagctcaatc tcatttcaaa taggagcatc ttatggagtg 5340 actatggact agtttcgctt gccaaaacca ggtaagccca caagaaggag catacatagt 5400 cgaaattatc ttcttcaatg ataagaaaga acattgtttt gatgcagttc tatgtatatg 5460 aaacgtaaca ctgagcatga tgcaccatac tggagaggtc ctatatggat gaacatgaac 5520 tacatgattc tttcttctct ttaccattac tctataggta attttctacc ctccacttgg 5580 tcaaaagcgc cacatcatac tacaagacct ctacgttttc ttactatcat atgcattcgg 5640 tttaccatgt gtcaaaattc ctgcagtgga tggaccgtat agagaaaagt cgaaagcaat 5700 ttacacggaa ctaaggagca atttgataag gtatattatt atatggtatc tgcgatagag 5760 aggtctggtt tgatattaac ttgaaacatg tcataaaaat acaggaacgt ggttagaaac 5820 tattacgaga cggggtacat ctgggaacaa tatgatcaag ttaagggaac aggcaaaggc 5880 acgcgtctct tcaccggctg gtctgcgctt accttgttaa ttatgtcaga agattatcct 5940 attttttaga ttagaacctc ttcgggaacg aaactttaaa ttaccaacac atttgagtta 6000 gaagatcagt tttg 6014 // |
|