 |
|
EBI DbfetchID AJ278385; SV 1; linear; genomic DNA; STD; FUN; 2898 BP. XX AC AJ278385; XX DT 06-NOV-2000 (Rel. 65, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 4) XX DE Penicillium funiculosum xynC gene for endo-1,4-xylanase, exons 1-2 XX KW endo-1,4-xylanase; xynC gene. XX OS Penicillium funiculosum OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Trichocomaceae; mitosporic Trichocomaceae; OC Penicillium. XX RN [1] RP 1-2898 RA Furniss C.S.M.; RT ; RL Submitted (06-JUN-2000) to the EMBL/GenBank/DDBJ databases. RL Furniss C.S.M., Diet, Health and Consumer Sciences Division, Institute of RL Food Research, Norwich Research Park, Colney Lane, Norwich, NR4 7UA, UNITED RL KINGDOM. XX RN [2] RX DOI; 10.1016/S0167-4838(02)00366-7 RX PUBMED; 12147340. RA Furniss C.S.M., Belshaw N.J., Alcocer M.J., Williamson G., Elliott G.O., RA Gebruers K., Haigh N.P., Fish N.M., Kroon P.A.; RT "A family 11 xylanase from Penicillium funiculosum is strongly inhibited by RT three wheat xylanase inhibitors"; RL Biochim. Biophys. Acta 1598(1-2):24-29(2002). XX FH Key Location/Qualifiers FH FT source 1..2898 FT /organism="Penicillium funiculosum" FT /mol_type="genomic DNA" FT /note="IMI-134756" FT /db_xref="taxon:28572" FT mRNA join(1317..1588,1643..2042) FT /gene="xynC" FT CDS join(1317..1588,1643..2042) FT /gene="xynC" FT /product="endo-1,4-xylanase" FT /function="xylan degradation" FT /EC_number="3.2.1.8" FT /db_xref="GOA:Q9HFH0" FT /db_xref="InterPro:IPR018208" FT /db_xref="PDB:1TE1" FT /db_xref="UniProtKB/TrEMBL:Q9HFH0" FT /protein_id="CAC15487.1" FT /translation="MKLFLAAIVLCATAATAFPSELAQRAAGDLSKRQSITTSQTGTNN FT GYYYSFWTNGGGEVTYTNGDNGEYSVTWVDCGDFTSGKGWNPANAQTVTYSGEFNPSGN FT AYLAVYGWTTDPLVEYYILESYGTYNPSSGLTSLGQVTSDGGTYDIYSTQRVNQPSIEG FT TSTFNQYWSVRTEKRVGGTVTTANHFAAWKALGLEMGTYNYMIVSTEGYESSGSSTITV FT S" FT exon 1317..1588 FT /gene="xynC" FT /number=1 FT sig_peptide 1317..1364 FT /gene="xynC" FT mat_peptide join(1416..1588,1643..2039) FT /gene="xynC" FT /product="XYNC" FT /EC_number="3.2.1.8" FT intron 1589..1642 FT /gene="xynC" FT /number=1 FT exon 1643..2042 FT /gene="xynC" FT /number=2 XX SQ Sequence 2898 BP; 802 A; 705 C; 597 G; 794 T; 0 other; catccataca ggtttctcct gtatggaatt tgtaattact tatcactaat tgtcacaatt 60 ctcaggtttt ctgaacatgc tttcttttcc gtccggcatt gttaagcttg atcatagcct 120 gtgtttctta aaggcggttc cggcggtaat ctcagtacta cgtcctacgt atgtaggtag 180 ttatatctat cctacccttt gactgtatgt tccctacttt gcagtactta gacaacgatt 240 ttctaggcag gttcctagaa tgctctcgtt ttcgtttact atcattgttt ttatgcgcgt 300 aatgtggagc tattgacgtg tatgtcactt tacatgccta taactaactt aatctaaacg 360 tccattaggg gttcaacata tgtattcccc gcctccgcat gttcactcca atgtggaaat 420 tatctccacc gtgcccaaca cttccctgat aatgagcaat gtcgatgagt atttcaatgc 480 aagaatctga gccgaatcaa gttttacaag gttagtcatt ggttgatcct gttgtcgaaa 540 gctagtgcag gttatgctcc gccgatgaag gctaaatata taacgggaga taaccctaac 600 tacctaggta tcaacccaac gcgacattga aaaatcttca aaaacatcct tactagcgga 660 tatcaatagc gagaactgcg attaaacatt gtcgatcttc ggcactttag cagcatgact 720 tcaggctaaa cacattgatg caaaccgctt tctcatttta cctgaaactt gggatgacga 780 atcctccaac cagttgtcga aacgaacagg ctccacatct cgcaacaaat caaagcaacg 840 agtctaatat atgtattcgt catctagtaa agatcaaacg atttcgtttc agcggtggta 900 cataccccaa gcactccgac aagtcggtta tccagacctg tcgatcttga atatcgccca 960 tacagagctc ttctttaaag accacgaccg aacatcaagg agaatttagc cagaaatttt 1020 ccggtatgcg agaatgatcc cagatttgca acagaaaagt gctctattgc gaatatcctc 1080 aagcatattc cccgaaactc cgcgatggag accttgaggg gggtcatatg gatgcgaggc 1140 atgatgaaac aaacaacccg ttactgttaa atgagaaatg agaatgcggg tatataaaca 1200 tgcggattgt cctcgccaga aaatcccccc cccccccccc caccaaaaca aaagacgtac 1260 cactcatttt ctggatatcc acacttggcg agaatcaaag aaccatttca atcaagatga 1320 agctcttcct agctgcaatt gtcctttgcg caactgccgc gacagccttc ccatcagaac 1380 ttgctcaacg cgctgcggga gaccttagca agcgtcaatc aatcacgacc agccagactg 1440 ggacgaacaa cggctactac tactcgttct ggaccaacgg cggaggagaa gtcacttaca 1500 caaatggcga caatggcgag tacagcgtga catgggtcga ttgtggtgac tttacatctg 1560 gcaagggctg gaatccagcc aatgcacagt aagtttccct ctttccttct aagcttatat 1620 tgtacgtact cacaatttgc aggactgtca cgtactcagg agaatttaac ccctctggaa 1680 acgcttattt ggctgtctac gggtggacaa cagatcctct tgtcgaatac tacatcctgg 1740 agtcctacgg cacctataac ccatcatctg gacttacttc acttggccag gtcactagcg 1800 atggtggcac ctacgatatc tactcaaccc agcgtgtcaa ccagccttcc attgagggaa 1860 cttccacctt caaccagtac tggtcagttc gcaccgagaa gcgagtcggc ggaactgtca 1920 ccacggccaa ccactttgca gcatggaagg cacttggact tgaaatgggc acttataact 1980 atatgattgt gtccaccgaa ggctacgaga gcagtggctc tagtaccatc acagtgtcct 2040 agacatgtct caatgacgct tgttacacag ctgtcccttt attgacactt ataaatgact 2100 tatggaaggg agtcggcaaa atttttatgt tcgaagtttc atatgtctat tgtggaaatc 2160 ggcccatatt ttcagggcta gtcactcttt gattgcatct taagttactt gatcaaatta 2220 agccctaaca ccaagatctg gaatgcgagc aatatcaagt atttattcat ttattttaaa 2280 ccccggagtg ggctgtcttt gatagtatag taatgatgca catttgttgt ggcagcctta 2340 cctgtttttc cattggcatt cgagatatct accgacatgt tccttcagca agcagtattt 2400 atcgcgtctc gatcaagcat cgacggcctt ttggggaaac caagaaaaat attttggcct 2460 ccatatctct gtcgcacatt ccctccttct ctgaaacctt tgcttttggg aacgttcgaa 2520 aaaacagagc ggttgcaagc agtagctcca tccaggcaag atgcataccg atgcatacta 2580 gtgagtaggc cagttagcga attgtttgtt ctcagtgccg atgatgaaat tatgcaatta 2640 aagacttact gcgagacccg ccaccaaagg gcatgaaaac atgcttcatc tcttttgtgg 2700 gattctccca tctgcttgga tcaaagctat atcccggaca tcaatagtta gcgatattga 2760 atcgaacatc tgccatgcct tgtaggcggg aaagtgacac cgaataggct ataggaacca 2820 ctcacgcatg aggattggga aacacatcag ggtcgcgatg taaagtatat gcctgagtag 2880 atactgtgac acctccag 2898 // |
|