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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ271692; SV 1; linear; mRNA; STD; FUN; 1200 BP.
XX
AC   AJ271692;
XX
DT   28-JAN-2000 (Rel. 62, Created)
DT   02-JAN-2002 (Rel. 70, Last updated, Version 3)
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DE   Agaricus bisporus partial mRNA for glucuronyl hydrolase (dig1 gene)
XX
KW   dig1 gene; glucuronyl hydrolase.
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OS   Agaricus bisporus
OC   Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC   Agaricomycetidae; Agaricales; Agaricaceae; Agaricus.
XX
RN   [1]
RP   1-1200
RA   Eastwood D.C.;
RT   ;
RL   Submitted (27-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL   Eastwood D.C., Plant Pathology and Microbiology, Horticulture Research
RL   International, Wellesbourne, Warwickshire, UNITED KINGDOM.
XX
RN   [2]
RX   AGRICOLA; IND23258261.
RA   Eastwood D.C., Kingsnorth C.S., Jones H., Burton K.S.;
RT   "Genes with increased transcript levels following harvest of the sporophore
RT   of Agaricus bisporus have multiple physiological roles";
RL   Mycol. Res. 105(10):1223-1230(2001).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1200
FT                   /organism="Agaricus bisporus"
FT                   /strain="Horst U3"
FT                   /mol_type="mRNA"
FT                   /country="Netherlands"
FT                   /dev_stage="detachment/sporulation/senescence"
FT                   /db_xref="taxon:5341"
FT   CDS             <1..>1200
FT                   /codon_start=1
FT                   /gene="dig1"
FT                   /product="glucuronyl hydrolase"
FT                   /function="involved in polysaccharide metabolism"
FT                   /db_xref="GOA:Q9P8B4"
FT                   /db_xref="InterPro:IPR008928"
FT                   /db_xref="InterPro:IPR010905"
FT                   /db_xref="InterPro:IPR012341"
FT                   /db_xref="UniProtKB/TrEMBL:Q9P8B4"
FT                   /protein_id="CAB71006.1"
FT                   /translation="STHLSNMKAVVALGFLAPSVLAATVPNELFSSLVPQKILATFNDL
FT                   PNPTQYPQYTDQRAGDWQYFNPNTWTSGFFPSTLYALNTRRTLCGATSRNGLGIANWLE
FT                   LGREASRALIPLETKNSQGHDVGFLSFPFVEELAVNPNSETAVTAINSFAKLLANRFNP
FT                   TVGCTRSWDAPDPDFQVIIDNMMNLEVLFHSAELTNNDTLRTIGKKHADTTMINHIRQD
FT                   GGTWHVLHYNTFTGAVTAKRTAQGFADSSTWSRGQAWGIYGYATMFKLTGKTEYRDTAV
FT                   RLADYFLDHIPNDGIVPWDFNAPSPKPADSSAATIAANALLLLSQLETTPSLKEKFSNA
FT                   AIELLEKITELAWNPSWQSLLSNGTVNAPARNQLTGTVYGDYYFVKAGNELISMGLASC
FT                   T"
XX
SQ   Sequence 1200 BP; 309 A; 285 C; 274 G; 332 T; 0 other;
     tcaacccacc tatcgaatat gaaagctgtg gtcgcccttg gttttctagc cccgtccgtc        60
     ctcgcggcta cagtccccaa cgaactcttc tcatccctcg tccctcaaaa aatccttgca       120
     accttcaatg acctacccaa tcctacccaa taccctcaat acaccgacca acgagccggc       180
     gattggcaat acttcaatcc caacacatgg acatcaggtt tcttcccctc cacactttac       240
     gctttaaaca cgaggcgcac attgtgcggt gccacatcac gaaatgggtt aggaattgct       300
     aattggttgg agttggggag agaggcgagt agggcgttga tacctcttga gactaagaat       360
     tctcagggac atgatgtcgg atttttgagt tttccgtttg ttgaggagtt ggctgtaaat       420
     ccgaacagtg agacggctgt tactgcgata aacagctttg ccaagttact tgccaatcgg       480
     tttaatccta ctgttgggtg tacaagaagt tgggacgcgc ctgatcctga tttccaggtc       540
     atcatcgaca acatgatgaa ccttgaagtt ctattccatt ccgccgaatt aactaacaac       600
     gacacgttgc gtacgattgg caaaaaacac gcggatacta ctatgataaa ccatatccga       660
     caagacggag ggacttggca tgtccttcat tataacacgt ttactggtgc tgttactgcc       720
     aagaggacgg ctcaaggatt tgcggatagc agcacgtggt cgcgtggtca ggcttggggt       780
     atttatggtt acgccactat gtttaaattg acgggtaaga ccgaatatcg tgatactgcg       840
     gtccgtttag cggattattt ccttgaccat attcctaatg atggaattgt accatgggat       900
     ttcaatgctc cgtctccaaa gccagcagat tcttcagcag caactatcgc tgctaatgct       960
     cttcttctcc tctcacaact cgaaacgaca cctagtctta aagagaaatt cagtaatgct      1020
     gccatcgagt tattggaaaa aatcactgaa ttggcttgga atccgtcgtg gcagagttta      1080
     ttgtcgaatg ggacagtgaa tgcgcctgct cggaatcaac ttacgggtac tgtttatgga      1140
     gattattatt tcgtcaaggc tgggaatgaa ttgatatcta tgggtttggc atcgtgtact      1200
//
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