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EBI Dbfetch

ID   AJ250858; SV 1; linear; genomic DNA; STD; PRO; 2465 BP.
XX
AC   AJ250858;
XX
DT   19-NOV-1999 (Rel. 61, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Bacillus megaterium bamM gene for beta-amylase, strain DSM319
XX
KW   bamM gene; beta-amylase.
XX
OS   Bacillus megaterium
OC   Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
XX
RN   [1]
RP   1-2465
RA   Meinhardt F.;
RT   ;
RL   Submitted (17-NOV-1999) to the EMBL/GenBank/DDBJ databases.
RL   Meinhardt F., Westfaelische Wilhelms-Universitaet, Institut fuer
RL   Mikrobiologie, Corrensstrasse 3, D-48149 Muenster, GERMANY.
XX
RN   [2]
RX   DOI; 10.1007/s002530100645
RX   PUBMED; 11499932.
RA   Wittchen K.D., Lee J.S., Stahl C., Strey J., Meinhardt F.;
RT   "Cloning, expression, and carbon catabolite repression of the bamM gene
RT   encoding beta-amylase of Bacillus megaterium DSM319";
RL   Appl. Microbiol. Biotechnol. 56(1-2):205-211(2001).
XX
DR   CABRI; DSM 319.
DR   StrainInfo; 156585; DSM 319.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2465
FT                   /organism="Bacillus megaterium"
FT                   /strain="DSM319"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1404"
FT   promoter        443..470
FT                   /gene="bamM"
FT   RBS             504..508
FT                   /gene="bamM"
FT   CDS             515..2152
FT                   /transl_table=11
FT                   /gene="bamM"
FT                   /product="beta-amylase"
FT                   /function="hydrolyzes 1,4-alpha-glucosidic linkages of
FT                   starch and liberates beta-maltose"
FT                   /EC_number="3.2.1.2"
FT                   /db_xref="GOA:Q9RM92"
FT                   /db_xref="HSSP:1J18"
FT                   /db_xref="InterPro:IPR000125"
FT                   /db_xref="InterPro:IPR001554"
FT                   /db_xref="InterPro:IPR002044"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="InterPro:IPR018238"
FT                   /db_xref="UniProtKB/TrEMBL:Q9RM92"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAB61483.1"
FT                   /translation="MKQLCKKGLAFVLMFIFVNAFILSPINGAAAVDGKSMNPGYKTYL
FT                   MAPLKKVTDYTTWEAFENDLRKAKQNGFYAVTVDFWWGDMEKNGDQQFDFSYAQRFAQA
FT                   ARNAGIKIVPIISTHQCGGNVGDDCNVPLPSWVWNLKSDDSLYFKSETGTTNKETLSPL
FT                   ATDVISKQYGELYTAFAQALAPYKDVIAKIYLSGGPAGEIRYPSYTAADGTGYPSRGKF
FT                   QVYTNFAKSKFQSYALTKYGSLAGINQAWGTNLTSASQILPPSDGYQFLKDGYSTAYGK
FT                   DFLAWYQGALEDHTKRIGQLAHQAFDSTFNVPIGAKVAGIHWQYNNPTIPHAAEKPAGY
FT                   NDYNALLDAFKTAKLDITFTCLEMTDSGNYPEYSMPKKLVRQVAGIANAKGVVLNGENA
FT                   LTIGSEDQYTKAAEMAFNYNFAGFTLLRFYDVINNDTLMGQFKNTLGVTPLAQTVVVKN
FT                   APTALGETVYIVGDRAELGQWDTSIYPIKLTYNSSTADWRGTVHFPASQNVQFKAIVKR
FT                   ADGSLKAWQPSQQYWSVPSTTTTYTDNW"
FT   sig_peptide     515..574
FT                   /gene="bamM"
FT   mat_peptide     575..2149
FT                   /gene="bamM"
FT                   /product="beta-amylase"
FT                   /EC_number="3.2.1.2"
FT   terminator      2159..2182
FT                   /gene="bamM"
XX
SQ   Sequence 2465 BP; 759 A; 460 C; 543 G; 703 T; 0 other;
     gatcttcatc acttacgtcc aaccgatgta tctgtaaaca gtacgagagg aaacttagat        60
     tttgataacg gagggacgga acatagcgaa gactcggaaa ttattttgac agtgattcat       120
     gggaacctcg agatgaagta aaaggcgacg tggctcgtat gttgttttat atggccgtgc       180
     gctatgaagg cgatgtaagt gatgagcctg acttagaact taataacaca gtgaataatg       240
     gcactgctcc ttatcacggg aaattatctg tgcttcttca atggaatgcc caagacccag       300
     tagatgatcg agaacgacgt agaaatgaca ttatttattc agactatcag cataaccgca       360
     atccttttat tgaccatcct gaatgaggtg aatgagattt ggaactaatg aagaaggcgt       420
     cctggcgggg cgtctttttt tttataaaag aaaaaggaaa aaactaaaat ccgccgaata       480
     cctataggtg attttgaaaa aatggaggga agatatgaaa cagctatgta aaaaagggtt       540
     ggctttcgtt ttgatgttta tttttgttaa cgctttcatt ttgagtccaa ttaacggagc       600
     ggctgccgta gatggaaaat caatgaatcc aggttacaaa acctatttaa tggcgccttt       660
     aaaaaaggta acagactata caacatggga agcgtttgag aacgatttac gcaaagcgaa       720
     acaaaatgga ttttatgcag tgacagtaga cttctggtgg ggagatatgg agaaaaacgg       780
     cgatcagcag ttcgattttt cctatgcgca gcgctttgct caagcagctc gtaatgcagg       840
     tataaagatc gttcctatta tttctactca tcagtgtgga ggcaatgtag gagatgattg       900
     taacgttccg cttccatctt gggtatggaa cttaaaaagt gatgacagcc tttactttaa       960
     atctgaaaca ggtacgacaa ataaagaaac gctaagcccg cttgcaacgg acgttatttc      1020
     taagcaatat ggagagctct acactgcatt tgcgcaagcg ttagcacctt ataaagacgt      1080
     gattgctaaa atctatttat caggaggccc tgcaggtgaa attcgttatc cgtcttatac      1140
     agcagcagac ggaaccggct atccgtctag agggaaattt caagtgtata cgaacttcgc      1200
     caaaagcaag tttcaatcat atgctttgac taaatacggt tcactcgccg gcattaatca      1260
     agcatgggga accaatttaa cgtctgcatc gcaaatttta ccgccatcag atggctatca      1320
     gttcttaaaa gatggttatt caacagctta tggaaaagat ttcttagcat ggtatcaagg      1380
     agctttggaa gatcatacaa aacgtattgg acagttagct catcaggctt ttgattccac      1440
     ctttaacgta ccaatcggtg caaaagtggc aggaattcat tggcagtata acaatcccac      1500
     gattcctcat gctgcagaaa aacctgctgg atataatgat tacaacgcgc ttttagatgc      1560
     gtttaaaaca gctaaattag atataacgtt tacgtgctta gaaatgacgg acagcggaaa      1620
     ttatccggaa tattctatgc caaagaagct tgtacgccag gtagcaggta ttgcgaatgc      1680
     aaaaggagtt gttttaaacg gggaaaatgc tttaactata ggcagtgaag atcaatatac      1740
     aaaagcagct gaaatggcct ttaactataa ttttgcagga tttactttgc ttcgtttcta      1800
     cgatgttatt aacaatgata cgctgatggg gcaatttaaa aatacgttgg gcgttacacc      1860
     acttgcgcaa acggttgtag taaaaaatgc gccaactgca ttaggagaaa cggtttatat      1920
     tgttggagac agagctgagc taggtcagtg ggatacgtcc atttatccaa ttaaattaac      1980
     atataattca tctacagctg attggagagg caccgtccat tttcctgcga gtcaaaatgt      2040
     tcaatttaaa gcaattgtaa agagagctga tggatcgtta aaagcatggc agccttcgca      2100
     gcaatattgg agcgtgccgt caacaacaac gacttataca gataattggt aaaacaaagc      2160
     cgcatagcaa acgctatcgc gctttttttg aacacaagcc ttatttccag ttcgtttcaa      2220
     taaattcatc tcgaccagac ttagcgcggt cttctttata atgctttgga tttttcttgt      2280
     gaaaatcttg gtgatactct tcggcttcat aaaacgtaga ggcaggcaga atgcttgtta      2340
     cgattggttt tttaaaacgt ccgctttctg cgacctctag cttcgttctc cttcagctgc      2400
     tctgtttttg gctgtcgtta tggtaaaccc ttgctgttcg atattgcgag ccgcgatctt      2460
     gacat                                                                  2465
//


  
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