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EBI DbfetchID AJ249196; SV 1; linear; genomic DNA; STD; PRO; 3610 BP. XX AC AJ249196; XX DT 27-AUG-1999 (Rel. 60, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Rhizobium leguminosarum bv. viciae dadR, dadX, dadA genes XX KW alanine catabolic operon regulator; alanine racemase; KW D-alanine dehydrogenase; dadA gene; dadR gene; dadX gene. XX OS Rhizobium leguminosarum bv. viciae OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; OC Rhizobium/Agrobacterium group; Rhizobium. XX RN [1] RP 1-3610 RA Poole P.S.; RT ; RL Submitted (25-AUG-1999) to the EMBL/GenBank/DDBJ databases. RL Poole P.S., School of AMS, University of Reading, Whiteknights Reading, RL RG66AJ, UNITED KINGDOM. XX RN [2] RX DOI; 10.1046/j.1365-2958.2000.01884.x RX PUBMED; 10792736. RA Allaway D.A., Lodwig E.M., Crompton L.A., Wood M., Parsons R., RA Wheeler T.R., Poole P.S.; RT "Identification of alanine dehydrogenase and its role in mixed secretion of RT ammonium and alanine by pea bacteroids"; RL Mol. Microbiol. 36(2):508-515(2000). XX FH Key Location/Qualifiers FH FT source 1..3610 FT /organism="Rhizobium leguminosarum bv. viciae" FT /strain="3841" FT /mol_type="genomic DNA" FT /db_xref="taxon:387" FT CDS complement(570..1034) FT /transl_table=11 FT /gene="dadR" FT /product="alanine catabolic operon regulator" FT /db_xref="GOA:Q9RAE8" FT /db_xref="InterPro:IPR000485" FT /db_xref="InterPro:IPR011008" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR019887" FT /db_xref="InterPro:IPR019888" FT /db_xref="UniProtKB/TrEMBL:Q9RAE8" FT /protein_id="CAB53546.1" FT /translation="MPALDAIDRNILRLLRLDARMSNAKLAAEIGLSPSACLRRIKIME FT KSGVIRGYTVLVDTGNADEMIAVIINITLERQTEDYLDRLEAAVRRHPEIRECFLMTGG FT SDYLLRVEVANAGEFERIHKEILSTLPGVLRIHSSFSIRNVLATRTRGRR" FT CDS 1230..2294 FT /transl_table=11 FT /gene="dadX" FT /product="alanine racemase" FT /db_xref="GOA:Q9RAE7" FT /db_xref="InterPro:IPR000821" FT /db_xref="InterPro:IPR001608" FT /db_xref="InterPro:IPR009006" FT /db_xref="InterPro:IPR011079" FT /db_xref="InterPro:IPR020622" FT /db_xref="UniProtKB/Swiss-Prot:Q9RAE7" FT /protein_id="CAB53547.1" FT /translation="MIDLAALGRNYRKLVSMLAPVRAGAVVKADAYGLGAERVARTLYS FT EGCRHFFVAQFVEAVRLRPALAHDAQIFVLNGLQPGNEIACAEMGIVPVLNSLAQWRQW FT SAAARILKRCLPAVLQFDTGMSRLGFPREERRELAAALRDGSNVEILFIMSHLASADDM FT GSEQNGEQFAEMSRIADEFPGFDISFANSGGVFLGEAYYGVLARPGIALYGGAPNAGEK FT NPMEPVVSLNVAVVQTRTVPAGAKVGYGGAHVTQRETRLATIAAGYADGLPRCLSDRGA FT VYFKGVRLPIVGRVSMDSTTVDITALPEGALTFGSLVEVLGRHQTLEDIARDAGTISYE FT ILTGLGDRYDRQYR" FT CDS 2324..3574 FT /transl_table=11 FT /gene="dadA" FT /product="D-alanine dehydrogenase" FT /db_xref="GOA:Q9RAE6" FT /db_xref="InterPro:IPR006076" FT /db_xref="UniProtKB/Swiss-Prot:Q9RAE6" FT /protein_id="CAB53548.1" FT /translation="MKVIVLGAGIVGVTSAYQLAKAGHDVTVVDRQPGPALETSFANAG FT EVSFGYCSPWAAPGIPMKAMKWLFMKHAPLILRPKLDMAMLSWMARMLSNCTSERYAIN FT KSRMLRLADYSRIALADLRAETGIAYDERMQGTLQLFRTQQQLEASAKDVKALAADGIP FT YEVLDRDGCIRFEPALKHVRDKIVGGLLTPKDETGDCFKFTNALAAKAEALGVRFAYGT FT TIKALDVEAGRVRGVITDRERMSAEAVVVALGSYSPLLLKPLGIRLPVYPVKGYSLTIP FT IADASRAPESTVMDETYKIAITRLGDRIRVGGMAEISGYTNDLGLARRSTLEYSVTDLF FT PGGDISKASFWSGLRPMTPDGTPVIGPTKVAGLFLNTGHGTLGWTMSTGSARLIGDLVG FT GGQPEIDARDLAITRYG" XX SQ Sequence 3610 BP; 684 A; 1114 C; 1104 G; 708 T; 0 other; acattcgcac gaacgcccga tcatcatcag atatctgaat gcgggagccg acggcatcat 60 ggtcccgatg gtggacacgg ccgaacaggc gcgcgccgtc gtcgatgccg tccgttacgc 120 tcttccgtcc gacttcgaca agcgcctggt ggtggcgatg atcgagacag tggatgccat 180 cgacaatctc gaccagatgc tgaaggtcga cggcatcgac gtcttcttca tcggacctgg 240 cgatctctca cagaatatgg gctatccgcc ggctccaccc ttcggcgagc cgcgtcctga 300 agctgtcatg gagaaggtcg cgctcgccgt cgacaagatc cgcgcagcag gcagggttgc 360 aggcacgctg gccaccgccg atgaactgcc tcattggctg cagaagggtg ttcagttctt 420 ttacatccac accgacccct tcctgcgccg cgggattgcc ggcatcaggc agacgctggc 480 gcgatagcag gcggggtaga tttccttctt cgctgacgct gggctgccat gcggaggggc 540 gctcaattaa tattagctta gatcgcggtt cagcgcctgc ccctcgtgcg cgtcgccaga 600 acattgcgga tcgagaagct ggaatgaatt ctgaggacgc cgggtaaggt cgacagtatc 660 tctttgtgga tccgctcgaa ctcgcccgca ttggcaacct ccacgcgcag cagatagtcg 720 gaaccgcccg tcatcagaaa acattcccgg atctcgggat gccgccgaac cgccgcctcg 780 aggcggtcga gatagtcctc cgtttgtcgc tctagagtga tgttgatgat cacggcgatc 840 atctcatccg cattgccggt gtcgaccagc accgtatagc cgcggatcac gcctgatttt 900 tccatgatct tgatgcgcct gaggcaggcc gagggagaaa gaccgatctc ggcggcgagc 960 ttggcattgc tcatgcgggc atcgaggcgc agtagcctca ggatattgcg atcgatggcg 1020 tcgagagcgg gcatagtgga tcattccaaa cttttatcga ttatgcgcat aatgggcaaa 1080 tcaagcaata atcggctact gaatgatagg caatttcgct cattatttca taaactccct 1140 gagatcaaaa aggggtggac atggatagcg atattttggt ttcccgcaca cgcaccgcta 1200 cgatcgcgca gggagccacg ggctatctga tgatcgatct tgccgccctc ggccgtaact 1260 atcgcaagct cgtatcgatg ctggcaccgg tccgcgccgg cgccgtcgtc aaggccgatg 1320 cctatggtct cggcgccgag cgggtcgcga gaacgcttta cagtgaaggt tgcaggcatt 1380 tcttcgtcgc ccaatttgtc gaggccgtga ggctcagacc ggcccttgcg cacgacgccc 1440 agattttcgt gctgaacggc ttgcagccgg gcaacgagat cgcctgcgcc gagatgggca 1500 ttgtcccggt tctcaattcg ctggcgcagt ggcggcagtg gtcggcggct gcgcgcattc 1560 tgaagcgctg cctgccagcc gtcctccaat tcgacaccgg gatgtcgcgg ctcggttttc 1620 cccgggaaga gcgaagagag ctggcggcgg ctcttcgcga tggcagcaat gtcgaaatcc 1680 tgttcatcat gagccatctg gcttcggccg atgacatggg cagcgagcag aacggcgaac 1740 agtttgccga gatgtcccgc atcgccgacg aatttcccgg cttcgacatt tccttcgcca 1800 attccggcgg cgttttcctg ggcgaggcct attacggcgt actcgcccgc cccggcatcg 1860 cgctttatgg cggcgctccg aacgccggcg agaagaaccc gatggagccg gtcgtcagcc 1920 tcaatgtcgc cgttgtgcag acgcgcaccg taccggcggg tgcgaaggtc ggctatggcg 1980 gcgcgcatgt cacgcaacgg gaaacgcgtc tcgccaccat tgccgccggc tatgctgatg 2040 gcctgccgcg atgcctcagc gaccgcggcg ccgtctattt caagggcgtc cgcctgccga 2100 tcgtcggccg cgtgtcgatg gacagcacga ccgtcgacat cacagcactg cccgaagggg 2160 cgctgacctt cggcagtctc gtcgaagtgc tcggccgcca tcagacgctt gaggacatcg 2220 cgcgcgatgc cggcaccatt tcttacgaaa tcctaactgg cctgggcgat cgttacgaca 2280 ggcaatatcg ctaagagccg gcggctccat cattggggac atcatgaagg tcatcgttct 2340 aggagccggc atcgtcggcg ttacatccgc ttatcaactg gccaaggccg gtcatgacgt 2400 cacggtcgtc gaccggcagc cgggtccggc actggagacg agctttgcca atgccggcga 2460 agtctccttc ggctattgct cgccatgggc agcgcccggc attcctatga aggccatgaa 2520 gtggctgttc atgaaacatg cgccgctcat cctgcgccca aaattagaca tggccatgct 2580 ttcctggatg gcgaggatgc tgtcgaactg cacctccgag cgttacgcga tcaacaagag 2640 ccgcatgctg cgccttgccg attacagccg catcgcgctg gccgatcttc gcgccgagac 2700 cggcatcgcc tatgatgaac gcatgcaggg aaccctgcag ctgttccgca cgcagcagca 2760 gctcgaggcc tcggcaaagg atgtcaaggc gctggctgcc gacggcattc cctatgaggt 2820 gctggaccgg gacggctgca tccgcttcga accggcgctg aagcatgtgc gcgacaagat 2880 tgtcggcggt ctgctgacgc cgaaggacga aaccggcgat tgcttcaagt tcaccaatgc 2940 gctggcggcc aaagccgagg cgctcggcgt ccgtttcgct tacgggacga cgatcaaggc 3000 gctggatgtc gaggccggcc gcgtgcgtgg ggtcatcacc gatcgtgaaa ggatgagtgc 3060 ggaggcggtg gtggtcgcgc tcggcagcta ttcgccgctg ctgctcaagc cgctcggcat 3120 ccggctgccg gtctatcccg tcaagggcta ttcgctcacc atcccgatcg ccgatgcgtc 3180 acgcgcgccg gaatcgactg tgatggacga gacctacaag atcgcgatca cccggctcgg 3240 cgatcgcatt cgtgtcggcg gcatggctga aatatcaggc tataccaatg atctcggcct 3300 ggcccgtcgc agcacgctgg aatattcggt caccgatctc ttccccggcg gcgatatttc 3360 caaggcctcc ttctggtccg gcctgcgccc gatgacgcct gatggcacgc cggttatcgg 3420 cccgacaaag gtcgccggtc tcttcctcaa taccggccac ggcacgctcg gctggacgat 3480 gagcaccggt tcggcgcggc tcatcggcga tctcgtcggc ggcggccagc cggaaatcga 3540 cgcgagggat ctcgccatca cccgctacgg ctgaaacccg gggcaacaca gaaaaagagg 3600 gatgaacatg 3610 // |
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