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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ249161; SV 1; linear; genomic DNA; STD; PRO; 1345 BP.
XX
AC   AJ249161;
XX
DT   25-AUG-1999 (Rel. 60, Created)
DT   20-SEP-2000 (Rel. 65, Last updated, Version 2)
XX
DE   Eubacterium acidaminophilum selD2 gene for selenophosphate synthetase
XX
KW   selD2 gene; selenophosphate synthetase.
XX
OS   Eubacterium acidaminophilum
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae;
OC   Eubacterium.
XX
RN   [1]
RP   1-1345
RA   Jaeger J.;
RT   ;
RL   Submitted (24-AUG-1999) to the EMBL/GenBank/DDBJ databases.
RL   Jaeger J., Institut fuer Mikrobiologie, Universitaet Halle,
RL   Kurt-Mothes-Strasse 3, D-06120 Halle, GERMANY.
XX
RN   [3]
RX   DOI; 10.1007/s002030000196
RX   PUBMED; 11041351.
RA   Gursinsky T., Jaeger J., Andreesen J.R., Soehling B.;
RT   "A selDABC cluster for selenocysteine incorporation in Eubacterium
RT   acidaminophilum";
RL   Arch. Microbiol. 174(3):200-212(2000).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1345
FT                   /organism="Eubacterium acidaminophilum"
FT                   /strain="DSMZ 3953"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1731"
FT   RBS             1..7
FT                   /gene="selD2"
FT   CDS             15..1118
FT                   /transl_table=11
FT                   /transl_except=(pos:126..128,aa:Sec)
FT                   /gene="selD2"
FT                   /product="selenophosphate synthetase"
FT                   /function="synthesis of monoselenophosphate from selenide
FT                   and ATP"
FT                   /note="tga at position 126-128 = selenocysteine"
FT                   /db_xref="GOA:Q9L473"
FT                   /db_xref="InterPro:IPR004536"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9L473"
FT                   /protein_id="CAB53511.1"
FT                   /translation="MDIKKLKLHHRLETNKLKTNKHYEEEVKLTQMVRAAGUAAKLGPE
FT                   YLAKALEIIPQVFNKDLLVGYEHSDDAAVYRINSETALILTLDFFTPVVDDPYLFGLIS
FT                   ATNSLSDVYAMGGKPLVAMNIVCFPACKDVGILAQILKGGFDKVQESGAILVGGHSVDD
FT                   NEPKYGLSVCGIVHPGRVLSNSAAKVGDVLVLTKPLGTGIINTGIKAGIVGQQTVDEVV
FT                   KIMTHLNKYAALAFDDIRVNSATDVTGFGFLGHTMEMARGSDVTIEITVAQIPFIAETE
FT                   ELAKSGIIPAGAYRNRDFVKNDVRMEGIADHISDILYDPQTAGGLLVSVPENDAKALVA
FT                   KMLAYGSLDARIVGRVIPKADKYVIVR"
XX
SQ   Sequence 1345 BP; 403 A; 279 C; 316 G; 347 T; 0 other;
     aagggggcta ttatatggat attaagaaac taaagcttca tcatagactc gaaacaaaca        60
     agttaaaaac aaataaacat tatgaggaag aggttaagct gactcagatg gttcgggcag       120
     ctggttgagc cgctaagctg gggccggagt atctggccaa agcgcttgaa ataattcctc       180
     aggtattcaa caaggatctt ttagtaggct atgagcactc agatgacgct gcagtctata       240
     ggataaacag tgagacggca ctaatactga cgctggattt tttcacacct gtagtcgacg       300
     acccctatct cttcggattg atttcagcca cgaactcact ctctgacgtg tatgctatgg       360
     gcggcaagcc acttgtcgca atgaatatcg tctgctttcc agcctgcaag gacgttggca       420
     tattggcaca aattctaaaa ggcggctttg acaaggttca agaatctgga gcaattcttg       480
     tggggggcca ttcagtggat gacaacgaac caaaatacgg gctctctgtg tgcggcattg       540
     tccatccagg cagagtgctc tcaaactctg cagcaaaggt tggcgatgta cttgtgctca       600
     caaagcctct tggaacaggc ataataaata caggaataaa ggcgggaatc gtaggtcagc       660
     agacagtcga tgaggttgta aagatcatga ctcacctgaa caagtatgca gccctggctt       720
     ttgatgatat aagggttaat tctgcaacgg atgtaactgg ttttggattc ctaggacata       780
     ctatggagat ggcacggggc tctgatgtca caattgaaat cactgtagcc caaataccgt       840
     tcatagccga aacagaggag cttgcaaaat caggtataat tccagcagga gcatatcgta       900
     acagggattt tgtcaaaaac gatgtccgta tggagggtat tgctgatcac atatccgaca       960
     tactctatga tccgcagaca gccggaggac tcttggtttc tgttcccgaa aatgacgcca      1020
     aagctcttgt agcgaagatg cttgcatacg gcagccttga cgctagaata gtgggcagag      1080
     tcataccaaa agcagacaag tatgttatag tacgatagac cattcggata aattgaaatt      1140
     ctaaagcccc tgatttcggt gctgacgcaa gctgtcgagc aaacctatgt caggggctta      1200
     attgtgtgtt acttcaactt actattacaa ttaaccgtta taattataat tgcaattttc      1260
     aaaaaaaaat cctgacagcc tattgtcgtc aaggattttt taaattcaac aacccggatt      1320
     atattgtacg cctaaagacc ttcgc                                            1345
//
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