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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ245513; SV 1; linear; mRNA; STD; MAM; 1308 BP.
XX
AC   AJ245513;
XX
DT   03-OCT-2000 (Rel. 65, Created)
DT   21-OCT-2008 (Rel. 97, Last updated, Version 5)
XX
DE   Canis familiaris mRNA for T brachyury protein (t gene)
XX
KW   T brachyury protein; T gene; transcription factor.
XX
OS   Canis lupus familiaris (dog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis.
XX
RN   [1]
RP   1-1308
RA   Putt W.;
RT   ;
RL   Submitted (06-AUG-1999) to the EMBL/GenBank/DDBJ databases.
RL   Putt W., Dept. of Biology, University College London, M.R.C. Human
RL   Biochemical Genetics Unit, Wolfson House, 4 Stephenson Way, London NW1 2HE,
RL   UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s003350010253
RX   PUBMED; 11252170.
RA   Haworth K.E., Putt W., Cattanach B., Breen M., Binns M., Lingaas F.,
RA   Edwards Y.H.;
RT   "Canine homolog of the T-box transcription factor T; failure of the protein
RT   to bind to its DNA target leads to a short-tail phenotype";
RL   Mamm. Genome 12(3):212-218(2001).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1308
FT                   /organism="Canis lupus familiaris"
FT                   /map="CFA 1q23"
FT                   /mol_type="mRNA"
FT                   /clone_lib="BAC genomic"
FT                   /clone="90I8"
FT                   /db_xref="taxon:9615"
FT   CDS             1..1308
FT                   /gene="t"
FT                   /product="T brachyury protein"
FT                   /function="transcription factor"
FT                   /db_xref="GOA:Q9GL27"
FT                   /db_xref="HSSP:1XBR"
FT                   /db_xref="InterPro:IPR018186"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9GL27"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAC10530.1"
FT                   /translation="MSSPGAESAGKSLQYRVDHLLSAVESELQAGSEKGDPTERELRVG
FT                   LEDSELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKY
FT                   VNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGGQIMLNSL
FT                   HKYEPRIHIVRVGGAQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKE
FT                   RSDHKDMMEEPGDSQQSGYSQWGWLIPGTSTLCPPATPHPQFGGPLSLPSTHGCERYPA
FT                   LRNHRPSPYPSPYAHRNNSPTYSDNPSACLSMLQSHDSWPSLGTPAHTSMLPMSHSAGP
FT                   PTGSSQYPSLWSVSNGTITPGAQPAGMSNGLGAQFFRGSSAHGAPLGHAVPAPSASGSP
FT                   LYEGAPTATDVPDSQYDASAQARLIASWTPVSPPSM"
XX
SQ   Sequence 1308 BP; 277 A; 448 C; 362 G; 221 T; 0 other;
     atgagctccc ccggcgccga gagcgcgggg aagagcctgc agtaccgagt ggaccacctg        60
     ctgagcgccg tggagagcga gctgcaggcg ggcagcgaga agggcgaccc cacggagcgc       120
     gagctgcgcg tgggcctgga ggacagcgag ctgtggctgc gcttcaagga gctcaccaac       180
     gagatgatcg tgaccaagaa cggcaggagg atgttccccg tcctgaaggt gaacgtgtcc       240
     ggcctggacc ccaacgccat gtactcgttc ttgctggact tcgtggcggc cgacaaccac       300
     cgctggaagt acgtgaacgg agagtgggtc ccagggggca agcccgagcc ccaggcgccc       360
     agctgcgtct acatccaccc ggactcgccc aacttcggag ctcactggat gaaggctccc       420
     gtctccttta gcaaagtcaa gctcaccaac aagctcaacg gagggggtca gatcatgctg       480
     aactccttac acaagtatga gcctcggatc cacatagtga gagttggggg cgcacagcgc       540
     atgatcacca gccactgctt cccagagacc cagttcatag cagtgactgc ttatcagaac       600
     gaggagatca cggctcttaa aattaaatac aatccatttg caaaagcttt ccttgatgca       660
     aaggaaagaa gtgatcacaa agatatgatg gaagagcctg gagacagcca gcaatctggg       720
     tactcccaat ggggttggct catccctgga accagcaccc tgtgtccacc tgccaccccc       780
     caccctcagt tcggaggccc cctctcactt ccctccacgc acggctgtga aaggtacccc       840
     gccctgagga accaccgtcc atccccctat cccagccctt acgcacatcg gaataattct       900
     ccaacctatt ctgacaatcc atctgcatgt ttgtccatgc tccaatccca tgacagttgg       960
     cccagccttg ggacgcctgc ccacaccagc atgctcccca tgagccacag tgccggccca      1020
     cccaccggct ctagccaata ccccagcctg tggtccgtga gcaatggcac catcacgccg      1080
     ggagcgcagc cggccgggat gtccaacggg ctgggagcgc agttcttccg gggctcctct      1140
     gcgcacgggg cgcctctcgg ccacgcggtc ccggctccct cggcctccgg atccccgctg      1200
     tacgaggggg cccccacggc cacagacgtt cccgacagcc agtacgacgc ctcggcccaa      1260
     gcccgcctca tcgcctcgtg gacgcctgtg tcgccgcctt ccatgtag                   1308
//
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