 |
|
EBI DbfetchID AJ243535; SV 1; linear; genomic DNA; STD; PRO; 4611 BP. XX AC AJ243535; XX DT 02-JUL-1999 (Rel. 60, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Synechococcus elongatus petC, petA and thdF genes XX KW apocytochrome f precursor; petA gene; petC gene; KW possible thiophene and furan oxidation protein; Rieske iron-sulfur protein; KW thdF gene. XX OS Synechococcus elongatus OC Bacteria; Cyanobacteria; Chroococcales; Synechococcus. XX RN [1] RP 1-4611 RA Schneider D.; RT ; RL Submitted (01-JUL-1999) to the EMBL/GenBank/DDBJ databases. RL Schneider D., Plant Biochemistry, Ruhr-University Bochum, RL Universitaetsstrasse 150, Bochum 44780, Germany. XX RN [3] RX DOI; 10.1016/S0167-4781(00)00048-8 RX PUBMED; 10760604. RA Schneider D., Altenfeld U., Thomas H., Schrader S., Muehlenhoff U., RA Roegner M.; RT "Sequence of the two operons encoding the four core subunits of the RT cytochrome b(6)f complex from the thermophilic Cyanobacterium synechococcus RT elongatus"; RL Biochim. Biophys. Acta 1491(1-3):364-368(2000). XX FH Key Location/Qualifiers FH FT source 1..4611 FT /organism="Synechococcus elongatus" FT /mol_type="genomic DNA" FT /db_xref="taxon:32046" FT CDS complement(621..941) FT /transl_table=11 FT /product="hypothetical protein" FT /note="ORF1" FT /db_xref="UniProtKB/TrEMBL:Q9X9T3" FT /protein_id="CAB46684.1" FT /translation="MLTPLTGDELHALLLRKWGRSFDLQFRRVGNRIFLQVMWRYLEQA FT SYPDTPEDYAAHLGAIAQHLNDWGCAQQVCTYIETTREKPRLGKAVNIPLDLGSRIIEW FT LE" FT CDS 1057..1599 FT /transl_table=11 FT /gene="petC" FT /product="Rieske iron-sulfur protein" FT /db_xref="GOA:P0C8N7" FT /db_xref="InterPro:IPR005805" FT /db_xref="InterPro:IPR014349" FT /db_xref="InterPro:IPR014909" FT /db_xref="InterPro:IPR017941" FT /db_xref="UniProtKB/Swiss-Prot:P0C8N7" FT /protein_id="CAB46649.1" FT /translation="MAQVSGMSDVPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPP FT ASGGTGGGAVAKDALGNDIKVSEYLAKHLPGDRSLAQGIKGDPTYVIVTEDHQIANYGL FT NAVCTHLGCVVPWNVSENKFICPCHGSQYDSTGKVVRGPAPLSLALVKATVTEDDKLVF FT TPWTEIDFRTGKEPWWT" FT CDS 1620..2555 FT /transl_table=11 FT /gene="petA" FT /product="apocytochrome f precursor" FT /db_xref="GOA:P0C8N4" FT /db_xref="InterPro:IPR002325" FT /db_xref="InterPro:IPR011054" FT /db_xref="UniProtKB/Swiss-Prot:P0C8N4" FT /protein_id="CAB46650.1" FT /translation="MKHFFKSLTLAIALAASVLFWSPQAQAYPFYAQQGYESPREATGR FT IVCANCHLAAKPIQVEVPQAVTPDSVFEAVVKIPYDTSVQQVLGDGSKGGLNVGAVLML FT PEGFKIAPPDRLPEELQAKTSGIYYQPYSDDQQNIILVGPLPGEQYQEIVFPILAPNPG FT TDKSIHFGKYAVHAGGNRGRGQVYPNGEKSNNNVFTAPIAGTITSITPNPDGSTAVVIT FT PENGEAVTETVPAGPELIVREGQTVVAGAALTNNPNVGGFGQKDTEIVLQDPNRIKWLL FT VFFAAITLSQILLVLKKKQVEKVQAAEMSF" FT CDS 2577..3986 FT /transl_table=11 FT /gene="thdF" FT /product="possible thiophene and furan oxidation protein" FT /db_xref="GOA:P0C8N9" FT /db_xref="InterPro:IPR002917" FT /db_xref="InterPro:IPR004520" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR018948" FT /db_xref="UniProtKB/Swiss-Prot:P0C8N9" FT /protein_id="CAB46651.1" FT /translation="MRHFHDTIAAIATAIVPQQGSIGIVRLSGAKAVAIAQSLFEAPGK FT QPWESHRILYGYVRDPQTKERVDEALLLLMLAPRSYTREDVVEFHCHGGLIPVQRVLQL FT CVAAGARLADPGEFTLRAFLNGRLDLTQAESVAELVAAQSTTAAQIALAGLTGKLARPL FT QQIRQTCLSLLAEIEARLDFTDELPPLDPAAIAEQIRQLQHQVEAFLATAERGALIRTG FT LKVAIVGRPNVGKSSLLNAWSRSDRAIVTDLPGTTRDIVESQLVVGGIPIQVLDTAGIR FT ETDNLVEQIGVQRSRQAALSADLILLVIDASQGWTAADQAIYDQLQLKQRRQQAPQSVL FT VVLNKADLLSETTEVKDIPLPIAPIPTVLLSALSQRGIEQLEDAILHLVQGQGVSAANL FT DFAINQRQAGLLEQVHQSLNHVLAAIDAQLPLDFWTIDLHAAARALGTLTGEEVTESVL FT TEIFSRFCIGK" XX SQ Sequence 4611 BP; 1008 A; 1239 C; 1240 G; 1124 T; 0 other; gaattccttc ggccacggcg ggaatggggg tgccgaggga gttgtacatt tcacgcacac 60 ccaccaaacc aatttcttca atgggggtca catcacccgc aacgataccg taggtcacaa 120 gccgcagata gtagtcgagg tcccgcaggc aggtggcggt catttcttca ccgtaggcat 180 tgccaccggg ggagaccaca tcaggccgtt tttggaagag ttgatcgccc gcttgcttga 240 caatccgctc acggttttct gtcagggttt gggcaatgcg cagacgacgc tcgccagtgc 300 tgacaaagtt tttaatgcga tccagttcac cggggctgag gtaacgggcc tcggcatctg 360 cattcacgat cgatttcgtg acgacgctca ttgagttcct ccaaagttgg aattgtaaaa 420 caagggtctt gataatgtgg catctgccat tggaatgtta cgactcaccc acctcccaaa 480 ggagagatag gtagggcgat ggacccgacg agctgacgta accttccgca aacattctca 540 ggcatagggg ggacatctcc cacattatcg caatcctttt taacattctt aacgtttttt 600 caaaaatctg ctaggggcag ctattccagc cattcaataa tacggctgcc aaggtcgagg 660 ggaatattca ccgccttgcc gaggcggggc ttttcacggg tggtctcaat ataggtgcag 720 acctgctggg cacagcccca gtcgttgagg tgctgcgcga tcgcccctag gtgggcagca 780 tagtcttcgg gggtatcagg ataagaggcc tgctccaggt agcgccacat gacctgcaaa 840 aagatgcgat tgccaacgcg gcgaaactga aggtcaaagg agcgccccca tttgcgcagg 900 agcaaggcat ggagttcatc accagtaagg ggcgtcagca ttgtcagaat ttcagccctt 960 ggggttggga cggctcggac ggtgtaataa tagttaataa acgtaattat tttacggctg 1020 tccgtttcga ttccttaagt aaataagccg taaaccatgg ctcaagtttc tggaatgtct 1080 gatgtgcccg atatggggcg gcgacagttt atgaatctgc tgacgtttgg taccatcact 1140 ggtacagcgt tgggtgccct ctatcctgtc gtcaagtatt ttattccacc cgccagtggc 1200 ggcacggggg gtggtgcggt tgccaaggat gctttgggca acgatattaa ggtttccgag 1260 tatctcgcaa agcatttgcc gggcgatcgc tccctcgccc aagggattaa aggagatccc 1320 acctacgtga ttgttactga agatcaccaa attgccaatt acggcttgaa tgccgtctgc 1380 actcacctgg gttgtgtcgt accttggaat gtgagtgaaa acaaattcat ttgtccttgc 1440 cacggctccc aatacgatag caccggtaaa gtagtgcgtg gtcctgctcc cctgtccttg 1500 gcactggtga aggccacggt tacagaagat gacaaactgg tgtttacccc ctggacggaa 1560 attgatttcc gcacaggcaa agaaccttgg tggacgtaaa aagacattta gggagtggta 1620 tgaaacactt ttttaaatcc ttgacgctgg cgatcgccct tgccgccagt gtactttttt 1680 ggtcaccgca agcgcaggcc tatcccttct atgcccagca gggatacgag agtcctcggg 1740 aagccactgg tcggattgtc tgtgccaact gccacttagc tgctaagcct atccaagttg 1800 aagtgcccca ggccgttacc cccgattccg tttttgaagc ggtggtaaaa attccctacg 1860 atactagtgt gcaacaggtg ttgggggatg gctctaaggg gggtctgaat gtcggtgcgg 1920 tgctgatgct gccagagggc ttcaaaattg ctccccccga tcgcctccct gaggagctgc 1980 aagccaaaac cagcggcatt tactaccaac cctacagtga cgatcagcaa aacattattc 2040 tcgtgggtcc cctgccgggt gagcagtatc aggaaattgt tttccccatc ctcgccccca 2100 accctgggac ggataaatcg atccacttcg gcaaatatgc tgtccatgcc gggggcaacc 2160 gcggtcgcgg ccaagtctat cccaacggcg aaaagagcaa caacaatgtc tttacggcac 2220 cgatcgccgg caccattact agtattaccc ctaaccccga tggcagcacg gcggtggtga 2280 ttacccccga gaatggcgaa gccgtgacgg aaaccgttcc cgctggccct gagctcattg 2340 tccgtgaagg ccaaacggtg gttgctggtg cagccctgac caacaatccc aatgtgggtg 2400 gttttggcca aaaagacacg gaaattgtcc ttcaggaccc caaccgcatt aagtggttgc 2460 tggtcttctt tgccgccatt acactttccc agattctctt ggttctgaag aagaaacagg 2520 tggagaaagt gcaagcagcg gagatgagtt tttagggagt tgtatcccca agggttgtgc 2580 gacacttcca tgacacgatt gcggcgatcg ccacggctat tgtgccccag caagggagta 2640 tcggcattgt ccgtctctcc ggcgccaaag cggtagcgat tgcccaatct ttatttgagg 2700 cccctggcaa gcagccttgg gaatcccatc gtattctcta tggctatgtc cgagaccccc 2760 aaaccaagga acgggtcgat gaagcgctcc tgcttttaat gcttgctccc cgttcctata 2820 cccgtgaaga tgtggtggaa tttcactgtc atggtggtct catccctgtt cagcgcgtgc 2880 tgcaactttg tgtggccgcc ggggcacgcc tcgcagatcc gggggaattt acactccggg 2940 ctttcctcaa cggtcgcctt gatctcaccc aagctgagag tgtggctgaa ctggtggctg 3000 cccaatccac caccgccgcc caaatagcgc tggcgggtct gacgggcaaa ttggctcgcc 3060 ctctccagca gattcggcaa acttgcttat ctctgttggc agaaattgaa gcgcgactag 3120 attttactga cgagctacct ccccttgacc ccgcagccat tgctgagcaa attcgtcagt 3180 tacaacatca ggtagaggca tttttagcca cggcagagcg gggagcactg attcgcaccg 3240 gactcaaagt ggcaattgtt ggtcgcccta atgtcggtaa gtcgagtttg ctcaatgcct 3300 ggagccggag cgatcgcgcc attgtcaccg atttaccggg caccacccgt gatattgttg 3360 agtctcaatt ggttgtgggt gggattccaa tccaagtgct tgataccgca ggcattcgcg 3420 agaccgataa ccttgtggaa caaattggcg tccagcgatc gcgccaagcc gccctcagcg 3480 ctgatctcat tctcctggtc atcgatgcta gtcaagggtg gaccgccgcc gatcaggcga 3540 tttacgacca actccagcta aaacagcggc ggcagcaagc gcctcagtca gtcttagttg 3600 ttttgaacaa agcggatctc ctcagtgaaa ccacagaggt taaagatatt ccattgccca 3660 ttgcccccat tcccaccgtc ctgctttcgg ctctcagtca aaggggaatt gagcagcttg 3720 aggacgccat tttgcacctt gtccagggtc aaggggtgag cgccgccaac ctagactttg 3780 cgatcaacca acgccaagcc gggctcttgg aacaggtcca ccaatccctc aatcatgtgc 3840 ttgcggccat tgatgcccaa ctgcccctgg atttttggac aattgacctg catgcggctg 3900 cccgggccct tggcacattg acgggggaag aggtcaccga gtcagtcctc acagaaatct 3960 ttagccgctt ttgtattggt aaataggcca tgctgggcaa aaccagttat cgttttcttc 4020 ttccctatgt attgcgctat tggcgaaccc tctccctagc actgctgtgt acggtgggct 4080 ttgtgggcac ggcccccttg gctgctcagt tagtgggtca aacctcggaa ctagtgggga 4140 caggcaatgt gaggcagtta ttaccgtggg caggggctgc catcctgctc tttctggggc 4200 gggggatctg tcaatttggt caagatgtgt tgatggccga tgctgctttt cgggtggttt 4260 acgatattcg tttaattttg tatgcccacc tgcatcgcct tggggtggat ttttttgagc 4320 gcatgggcag tggtgatctc acctaccgat taacggggga tgtggaggcg atcgccatgg 4380 tcatcactag agtatttcaa caacttttgc ctgctttgtt aacagcgatc gccctcatgg 4440 cctatatgtt ttatctcaac tggccactca ccctagcggc tttgatcatc actcccctga 4500 tggtggccgc aatcagttgg tttggtgagc gcttacgcac tgcttcgcgg cgtaaccaag 4560 atgcccttgg cggactgtcc tcctacctta cggaaacctt cgcgggaatt c 4611 // |
|