EBI Dbfetch

ID   AJ242854; SV 1; linear; genomic DNA; STD; FUN; 1424 BP.
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AC   AJ242854;
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DT   12-JUN-2001 (Rel. 68, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 5)
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DE   Aspergillus niger rgaeA gene for rhamnogalacturonan acetyl esterase, exons
DE   1 and 2
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KW   rgaeA gene; rhamnogalacturonan acetyl esterase.
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OS   Aspergillus niger
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC   Eurotiomycetidae; Eurotiales; Trichocomaceae; mitosporic Trichocomaceae;
OC   Aspergillus.
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RN   [1]
RP   1-1424
RA   Benen J.A.E.;
RT   ;
RL   Submitted (09-JUN-1999) to the EMBL/GenBank/DDBJ databases.
RL   Benen J.A.E., Section Molecular Genetics of Industrial Microorganisms,
RL   Wageningen Agricultural University, Dreijenlaan 2, Wageningen, 6703 HA,
RL   NETHERLANDS.
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RN   [2]
RX   DOI; 10.1016/S0008-6215(00)00066-5
RX   PUBMED; 10990025.
RA   de Vries R.P., Kester H.C., Poulsen C.H., Benen J.A.E., Visser J.;
RT   "Synergy between enzymes from Aspergillus involved in the degradation of
RT   plant cell wall polysaccharides";
RL   Carbohydr. Res. 327(4):401-410(2000).
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DR   StrainInfo; 261897; CBS 120.49.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1424
FT                   /organism="Aspergillus niger"
FT                   /isolate="CBS 120.49"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:5061"
FT   CDS             join(308..422,473..1143)
FT                   /gene="rgaeA"
FT                   /product="rhamnogalacturonan acetyl esterase"
FT                   /function="deactylation of rhamnogalacturonan"
FT                   /db_xref="GOA:Q96VT8"
FT                   /db_xref="HSSP:1K7C"
FT                   /db_xref="InterPro:IPR001087"
FT                   /db_xref="InterPro:IPR013830"
FT                   /db_xref="InterPro:IPR013831"
FT                   /db_xref="UniProtKB/TrEMBL:Q96VT8"
FT                   /protein_id="CAC41360.1"
FT                   /translation="MKVSSLPILAFLPTSLATTIYLAGDSTMATGGGGSDTAGWGDYVA
FT                   QYLSNSSGITVSNQAVAGRSARSYTREGRFDDIASTLEAGDYVIIESGHNDGGTLSSTS
FT                   DNGRTDCSGTGSEVCYSEYDGVNETILTFPAYLENAANTFKKIGATVIISSQTPDKPWE
FT                   TGTFVDDPPRFVEYAEIAADTADTSYVNHFAYVDQVYEALGADTVDAFYPIDHTHTSPA
FT                   GADVVAKAFLRGVVCGKLSLADELVTDDLELDEYECLDE"
FT   exon            308..422
FT                   /gene="rgaeA"
FT                   /number=1
FT   intron          423..472
FT                   /gene="rgaeA"
FT                   /number=1
FT   exon            473..1143
FT                   /gene="rgaeA"
FT                   /number=2
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SQ   Sequence 1424 BP; 333 A; 406 C; 367 G; 318 T; 0 other;
     taccggggat cagctgacag ttccctcacc cactccgcat cctgcagatg aatcaatcac        60
     tcaattcatg ccgatctcgt ccctgcagat cacggaccta ccacctcagc tccgtttcca       120
     ttgctgcagt agacgggctg atttggacga ttctcggtgc atcacacccc gatgttgcac       180
     cttttttcca cgtatggatg gaagcgttcg ccaagagctg gcacttcatt aaccctatct       240
     ctgcaagctc cgtgatgtcc tgacgaactg aattgccaac cctaagccta tgagatattc       300
     agccacaatg aaggtctcca gcctccccat cttagccttc ctccctacct ccctcgccac       360
     aaccatctac ctggcggggg actccaccat ggccactggc ggcggtggtt ccgacacagc       420
     aggtactttc ccacctacac catcacacct tcatccacta acaaacaatc aggctggggt       480
     gactacgtcg cccaatacct gagcaactca agcggcatca ccgtgtccaa ccaagccgta       540
     gccgggcgca gcgcacggtc ctacacgcgc gaaggccggt tcgacgacat cgccagcacc       600
     cttgaagcgg gcgactacgt gatcatcgag tccggtcaca acgacggcgg cacgctcagc       660
     tcgaccagcg acaacggccg caccgactgt tccggcacgg gctccgaagt atgctactcg       720
     gaatacgacg gcgtcaatga aaccatcctc accttccctg catacctcga gaacgccgcc       780
     aatacattca aaaaaatcgg cgcgaccgtc atcatctctt cgcagacgcc cgataaaccc       840
     tgggaaacag gcactttcgt ggatgacccg ccgcggttcg tcgaatacgc ggagatcgcg       900
     gcggacacgg cggatacgtc gtacgtgaat cattttgcct atgtggatca ggtgtatgag       960
     gcgttgggag cggataccgt ggatgcattt tatccgattg atcatacgca tacgagtccg      1020
     gcgggggcgg atgttgttgc taaggcgttt ctgaggggtg tggtctgtgg aaagttgagc      1080
     ttggcggatg agcttgtgac ggatgatttg gagttggatg agtatgaatg tttggatgag      1140
     tagacgtggc tgctacttgg ccgtggtagc tctggagttt cggtgattag agccagagaa      1200
     gacaatatat ctcctccgag gttttgtata caggatacac ccttggaatt gctaagttca      1260
     agcctaaatt cgtaacacag acagtagaaa actgggccca gcaaggctct gcgttcgcat      1320
     accttgctaa ataacatgtc acctggcaca aatacttggt ctaccggagt agatgtagca      1380
     gatgatgggc caacttgagc agggtgtgtg aatagcctat gtat                       1424
//